Neoarius graeffei (lesser salmon catfish): 132867196
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Entry
132867196 CDS
T10798
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Cilium and associated proteins [BR:
ngra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132867196 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132867196
NCBI-ProteinID:
XP_060755969
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Position
19:complement(30573459..30759065)
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AA seq
2199 aa
AA seq
DB search
MEVSSLIKKLAHSLVEIRVRSLRNIVSKLQLSLVSPADLVQERHLFINLLHWFNFPEVPL
QEEVLQLINILATHPTGAHMLRDVGGVDFLTQLSSNVDPQLRNLTETILDQLFHLHIHSL
NTSSDEQSSTSFQPVEEMSVRGYFQQNATNQTDAAPPPCVSVNTSVRCLTFSVFPWLSLT
ATDRHILSSNESSLRSNKPDLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLVQLLSVSS
ENDSSSLALHALACLQQLCANLRSRLRFHRDPSFCSAKHEPPSQNSSTSHPQEVRGTQRS
GGSTPEDLSPRPSVLGRPGMRVRGDGQDGDAASTSSSSSSSSSRREFPPGPNLEPEGEEP
LELQVQQWNMARFCMETLQHTLPLLRTEKMKVFQKVMELLSDILALMRVIVSPHELWEEC
SITANELREMMRVCLEKLGDIMCHHCHVASSEQPDSTLIHHRMSYMGTSVFTIRLLQTLL
PVEKASESIPESTASAVFHLCLDFPFSLAFPSIHESAVAYLEQSNSENHSLYCRVRQAAH
TMEATCSFLKEVQAEGEKNWLELLELAGQAIDGFPYHQHLLLVKEFIHICSYLWKSAQAS
PLLQMESQKILLKLLSHPLLPVKAETYARTLDAVKECLGVHNVSRPASSICSGVHFLFHP
RVLYEISAFGLHDQTKEVNSAAKDLLLYLLKGRLMMTALSWSRFNEALYPVIPVLQSHAG
TEDALGSSILLISGLSDETGGTAHSSATRLRAAIRLLFTKQHMVRCTAAQHLSLHLAKSE
DNRTSPPAVDSSTLSSLPSLYVTEKYVDIRLSDSNKSYLKVECVNKLCGIFTSETVDMVL
RKSAAEQLVVVLQDPATHAVLKSQGLMDKLVSLITESVNSRGRSVECLSEPSVTMLRKLV
YADPSLRHTLAQQPAFLLTLLQASMLMKANQKDVTEAAALMCFLLFDEIATVDVCSGKAA
TDMAFTPFSLPLCIIRRYNLPFRAASHHAVSPNCIILPLYTDLMELRAAKEALSFSWNRA
WHCGTDALLSHRRDNTTRTPEFHADLVMSESQVVSVRVYDMRAGLQECVNAIRSAGSHTG
VTFALTRMHLYLLTDQLALKHTAHSAKSTLQKVSWHGAVERFLQVKPACSEDEMLLADVI
SFLNAFFKRRQSESDDQDLKWLLELLLKPDLHVLLDLLLDVKTHTDPQRRTVIQRCGHQL
QRELTSLFNTLLLRLSHTSDRMCTFFSGPLASEFAVRLLQCLRVSDAPRFYGLPSLERSL
RSMTHTTALPGWSTHTSSMEPHTLCQKYLSGLLEVISSFYVEWGGNAMSFMGKGVTKNAV
ISLLHLSHEMMSESKDKDWMSRWSLGPEQSADDPCSAQFGLAWLIPLWVDRDPEVRCASL
ALGAALSSLESGCVMMSNSCQNISGGLWATLLNILLERQECSMVRREAAFLLQNLLVMPM
PASTAEARDCFWQSPCVHDEGSGVSLVGLPALQALLYHCHFFDHVGQMLRSCYTGRYTPT
HPWPVSTSADASVRQWRGSTAVLNHTQGSGSISTSSTLLLSDTRSPVISSSGAAQAQEPP
FNRLSTQGQSDSESSDSHLSQECVEGSECISVVTPHLLSAVCGLLTNLLCVLPEFTHTAL
QENHILQGLLSVWDAVEIERCLTELNAPDLLPADVEDARSQVLSSVCYVRSVCKLVQADV
VLSEDCLTQSELIKPLLNNLISILTLSHRHLDVHTQNALLHTWTDVFTLLVSLLRRNYAT
CGPHVCRTLGKRWQRFSDTIHACVDQCSSDSSLYTVSAQFLCVVFSEEIKKRGTSEEKSA
SLTAALNSKSGEKLCELLLEQYDKTQFQDPLKKVTAKVLMPLLACSSNAQSYACKAGLID
SCVGEMKQIHSQLHLESVRPGKTAHRKKEENSMKELRMVLEILRNCLYQHKECKEVATDL
KLSSVVLSLWPWLLLNDSGMMAALELLCVYTANCSAACSAVCGSSAHAALPRNPVTNSLM
HAVMKLASQVPPDNNSIHALSFSLLTNLSISRDCRGLLQKSNFLQHFLSLPMPRLSSKSS
KSSTAAAILSQWLQLLLNISFEEDGQQMIMKLRGALELLTDLAQGKHGDKKHTALLILHN
ICFCSANKPRVLACDKAVELLVSCLESSSLNTRALGASALWALLHNCQKAKATLKCPSIR
LKVDGAYVLAKKGAEPKNEANTNMYLLKCLQHLSRLLNT
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atggaggtatcatctctcattaaaaagcttgctcactcattagtggaaatccgagttcgc
tccctgaggaacattgtctccaagcttcagctcagtctcgtctcccccgctgatcttgtt
caggagcgacatctctttatcaacctgctgcactggtttaacttccctgaagtcccgctg
caggaggaagtgctacagctcattaacatactcgctacgcatccaaccggtgcccatatg
ttaagagatgtaggaggagtggactttctaacacagctgtcgtctaatgttgacccccag
cttcgaaatctcacagagacgatcctcgaccagctcttccatcttcatattcactcactg
aacacttcctccgatgagcaatcgagcacctcgtttcagcctgtggaggagatgtcagtt
agaggatatttccagcaaaatgcaacaaaccaaacagatgctgcaccaccgccctgcgta
tcagtgaacacctctgtgaggtgcttgacgttttcagtttttccttggttgtctttgact
gcaactgacagacacatattatcatcaaatgaaagctctttgagaagcaataagccagac
ttggtgcggaccacctgcgaacttctgcgagacgtcatcatgcaggactttccagcagaa
atcttcctgcagcgaccgagtatagtgcaaaatctggtgcagcttctcagtgtgagctca
gagaatgattccagctcgttggctctccacgctttggcctgccttcagcagctctgtgca
aacctgagaagtcggctgcgtttccacagagatcccagcttctgctcagctaagcatgag
ccaccctctcagaactcctcgacatcgcatcctcaggaggtcagagggacccagaggtca
gggggttcaaccccggaagatttgtcccctcgcccgtctgttctaggacgccctggtatg
cgagtccgaggggacggacaggacggtgatgccgcctctaccagcagcagcagcagcagc
agtagctctcggagagaatttccccctgggcccaacctggaaccggagggcgaggagcca
ctggagctccaggtacagcagtggaacatggccagattttgcatggagaccctacagcac
acacttcctctcctcaggacagagaagatgaaggttttccagaaggtgatggagctgctg
tcggatatcctcgcgttgatgagggttatcgtgtccccacacgagctgtgggaagagtgc
agcatcactgcgaacgaactgagagagatgatgcgggtgtgtctggaaaagctgggagac
atcatgtgtcatcactgtcatgtggcatcgtcagagcaacctgactcaactctgattcac
caccgcatgtcctacatggggacttctgtcttcaccattcgccttctgcaaaccctccta
cctgtggagaaggcaagtgagagcattcctgagagtacagcatctgctgttttccatctc
tgtctggatttccccttcagtctcgcgtttcccagcattcacgagtcagcagtggcctac
ttggagcagtcaaactctgaaaaccatagcctgtactgcagagttcgccaggctgctcac
acaatggaggccacatgttcctttctaaaggaagttcaggctgagggagaaaagaattgg
ctggagctgctggagctcgctggccaagccatagatggcttcccctaccatcagcaccta
ctgctcgtcaaggaattcatccacatctgctcctacctgtggaagtctgctcaggcaagc
ccactgcttcagatggagagccagaagattcttctgaaacttttatcccatcctctgctg
ccagtgaaggctgagacatacgcacgcactctggatgcggtcaaggagtgtttgggggtt
cataatgtgtccagaccagcatcatccatctgtagcggtgtgcatttcctcttccaccct
cgtgtcctttatgaaatcagtgccttcggccttcacgatcaaacaaaagaggtgaattcg
gctgccaaggatcttcttctgtacctgttaaagggacgattgatgatgactgctttgagt
tggagtagatttaatgaagcactttacccggtcattcctgtactgcagagtcatgcaggc
acagaagatgccctgggaagcagtatcctgctgataagtgggctctcggatgagactgga
ggcacagcccattcctcagcaactcgactccgtgccgcaatcagactgctcttcaccaaa
caacacatggtgagatgcacagcagctcaacacctgtcacttcatctggccaagtcagaa
gacaacagaacgtccccacctgctgtggacagctcgactctgtcatcactgccgtctctg
tatgttactgagaaatatgtggacatcagactaagcgactccaacaagtcttaccttaag
gtggagtgtgtgaataagctgtgtggtatctttacctccgagacggtggatatggtcttg
cgcaaatctgcagccgaacagctggtggttgttttgcaggatcctgcaactcacgctgtc
ctgaagagtcagggactgatggacaaactcgtgtctttgattacagagagtgtgaacagc
cgtggaaggtctgtcgagtgtctgtccgagccgagtgttacgatgctgaggaagttggta
tatgccgatccgtctctgcgtcacacactggctcagcaaccagcttttcttctcactctg
ctccaagcctcaatgctgatgaaggccaatcagaaagacgtgactgaagccgcagcactg
atgtgtttcctgcttttcgatgagatcgccacagtggatgtgtgcagtggaaaagctgcc
acagacatggccttcactccattctctctgccactctgcattatcagaaggtataatctg
ccgtttcgcgccgcgtctcaccatgcggtgagtcccaactgcatcattctgcctctttat
actgatctgatggagctgagagctgccaaggaggcactgagcttcagctggaacagagcc
tggcactgcggcaccgacgcgctgctctcacacaggagagacaacaccactcgcacacct
gagtttcatgctgatctggtgatgtcggagtctcaggtcgtgtcagtgcgagtgtatgat
atgagagcagggcttcaagagtgtgttaatgccattcgctcagctggatcccacaccggg
gtcaccttcgctctgaccagaatgcacctttatctcctgactgatcagctggctcttaaa
cacactgcccactcagccaagagcacgctgcagaaggtcagctggcatggagctgtggag
agatttcttcaggtgaaacctgcttgctctgaggatgagatgctgctggcggatgtcata
tcattcctcaatgctttcttcaagcggcgccagtctgagtctgatgatcaagatctgaaa
tggctcctagaattactcctgaaaccggatttgcacgtcctgctggacttgctgctggac
gtgaaaacgcacacggaccctcagagacgcaccgtgattcaacgctgtggacatcaactg
cagagagaactgacctcactgttcaacacactgctgctgcgtctctcgcacacctccgac
aggatgtgtacattcttttccgggccattagcatcagagtttgcagtccgtctgctgcag
tgtctccgtgtttcggatgccccacgtttttacggcctcccctctctggagcgttctctc
cgcagcatgacgcacaccaccgcgctgcctggctggagcactcacacaagcagcatggag
ccacacaccctctgccaaaaataccttagcggcctacttgaggtaatttcctctttttat
gtggagtggggagggaacgccatgtcctttatgggaaaaggagtgaccaagaatgcagtg
atctccctgcttcatctgtcccatgagatgatgtctgagagcaaggacaaggattggatg
tctcgctggtctcttgggcctgaacagagtgctgatgatccatgttcggctcagtttggt
ctcgcttggttaatcccactgtgggtggatcgtgacccagaggtgcgctgtgccagcctg
gcgctgggcgcggctctctcttcgttagaaagcggctgtgtgatgatgtcgaatagctgc
cagaacatctcaggcggtttgtgggcgacgttgctcaacatcctgctggagagacaggag
tgcagcatggtgcgccgagaggcagcttttcttttacaaaacctgcttgtgatgccgatg
cctgccagcacagcggaggccagagactgcttctggcagagcccatgtgttcatgatgaa
ggatctggcgtgtcgttggtgggtctcccggccctgcaggctcttctttatcactgccat
ttttttgatcatgtgggtcagatgttgaggagttgctatacgggtcgatacactcccaca
cacccttggcccgtcagcacctctgctgatgcctctgtgaggcagtggagaggcagtaca
gctgtgctgaatcacacacagggttcaggatccatttctacctccagcactttgctcctg
agtgacactcgttctcctgtcatctcctcctctggagcagcacaagcacaggagcctcca
ttcaacagactcagcacacaaggtcagagtgactcagagagctcagactcgcatctgtct
caggagtgtgtcgaaggatcagagtgcatctctgtagtaacccctcacctactgtcagct
gtgtgtggattactaaccaacctgctgtgtgttctgcctgaatttacacacactgcactt
caagagaatcacatcctgcagggcctgctcagtgtgtgggatgcagtggagatagagcga
tgcctgactgagcttaatgcacctgatctccttcctgctgatgtggaggatgccaggagt
caggtgctgagtagtgtgtgttacgtgcggagtgtgtgtaagctggtacaggccgatgtt
gtgctcagtgaggattgtctcacccagtcagagctcattaaacctctactgaataacctc
atctccatcctcacactctctcacaggcacctcgatgtgcatacccagaatgcattgcta
cacacctggacagatgtgtttacgctgctggtgagtctgctgcgtaggaactacgccaca
tgcggcccacatgtgtgcagaactctggggaaacgctggcagcgcttctcagacaccatc
catgcctgtgtggaccagtgcagttcagattcgtcactctacaccgtgtctgcgcagttt
ctctgtgtggtgttctctgaagagattaagaagcgagggacgagtgaagagaaatcagct
tctctgactgctgctctgaattccaaatccggagagaaactctgtgaattactgctggag
caatatgataaaactcagttccaggaccctcttaagaaggtcacggctaaagtcctgatg
cctctccttgcctgcagctccaacgctcagagttacgcctgcaaagcgggtcttattgac
agctgtgtaggagagatgaagcagatccactctcagcttcacctggagtcagtaagacca
ggcaaaaccgcacacagaaagaaggaggagaacagcatgaaggagctcaggatggtgctg
gagatcctgaggaattgtctctatcaacataaagagtgcaaagaagtagcaacagattta
aaactctcctctgtcgtgctgtccctttggccgtggctccttctgaacgactcgggcatg
atggcagcattagaactgctctgtgtatacacggctaactgcagtgcagcgtgcagtgct
gtatgtggtagttcagctcacgctgctttaccgagaaatcctgtgacgaactctctgatg
catgcagtgatgaagctggcgtcacaggttcctcctgataataacagcatccatgcactt
tccttctccctgctcactaatctgtctatctccagagattgcagaggcctcctacagaag
agcaacttcctgcagcactttctgtctctcccgatgcctcggttgagcagtaagagtagt
aaaagcagcaccgcagcagcgattctgtctcagtggctccagctgctgctgaacatctct
tttgaggaagacggtcagcagatgatcatgaagctgcgaggagctctggagctgttgacg
gatctggctcaaggcaaacatggagataaaaagcacacagctctgctcatcctccataac
atctgcttctgttcagccaacaaaccccgagtcctcgcctgtgataaagctgttgagctg
ctcgtatcatgtttggagagcagctcattaaacacccgtgctctcggcgcttcagcactg
tgggctttactgcacaactgtcagaaggcgaaggcgaccctgaagtgtccctccatcaga
ctgaaagtggacggagcatacgtgctcgctaagaaaggtgcagaacccaaaaatgaagcg
aacacgaacatgtatttactgaaatgccttcaacatctcagccgtcttttaaacacatga
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integrated database retrieval system
