Neoarius graeffei (lesser salmon catfish): 132867261
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Entry
132867261 CDS
T10798
Symbol
myripb
Name
(RefSeq) rab effector MyRIP
KO
K22237
Rab effector MyRIP
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132867261 (myripb)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132867261 (myripb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
Motif
Other DBs
NCBI-GeneID:
132867261
NCBI-ProteinID:
XP_060756042
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All DBs
Position
19:complement(39386800..39484347)
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AA seq
1086 aa
AA seq
DB search
MGRKLDLSGLTDDEADHVLRVVRRDMSLRKKEEDRLSDLKHELEEEGARCLLLAKQRGFN
EQCCIRCCGPFGFFLKPRRVCLNCRYNVCKACCSYSQQENGYVCTFCHKSRVLRAQSLEW
YYNNVKSRFKRFGSAKVFKTLYRKHIIERGALSELAEMSAPEGSNDNDGTVCGSDSAFSK
QSESHTIAETLTVALRVAEEAIEEAITKAEGYRDSLEKQNEARYLRDHREELVEELAATI
IQKIIQRGKQRSEMQAEYDFVWSQTHNSDLPSPTSSQNPLCSRPSHKTSSPSSLVQADGS
GRSLSALSLTSDESTGKMPEADKVSEAAEPERNLEIYSSLQRESRASILGWKNVDRLDNT
SASSVLQSPDGNWIALQASQHSRPSLLTKRKSLVFSVLEKESGVVSAYDEMGSDSEDGAE
LDSWGLALLQFRQRLSEETRSLDAQRNTEHYPPITSPSSGHFTNTETLNSDSENSTAPPT
RTHIPVLNVTQRNKVSPEPYLPYKLYEHDRPADSLSHSPRLGAMDVNFNPQVVGDSSDGE
EKAEQIRRFRRKKRNKHESAEQSCVHSGLYTGENSTLLLSTMMMKRQDSQETLSSLPPPT
YESPDTVTPPNRVTSTAMTPESVYQNTVAYNPVLPSPPMHNQSENATLDHELRSKLYELV
HQISKEDLTSSDDEPIQKVIDRRYDGAREKENDRVRHRKRNNEAQKESNGKTEMERNKRK
MERLSERWIERQVRRECEEIDVVRQRHKERDQKREGNDELVRRMEKHQNLDRQQKTESQR
QVERNWQVRQVETESENEREAEKMKPVETEPHMLARVNGLSMRRDLQENETQQVTINTEK
AKDGWVDIKKSVEEEHSEKGLYLTEEKVNQGLRQRSNSERESEKRAEPHNHSAPIDPEEQ
MSQTEKYPAASLCSITTEVLKVLNATEELIGEAEGKGHDPHESPTGTPLSSGSDSRKLDQ
DLTKMEENVYLAAGTVYGLEGALSDLEDCARSISSSTTETELAFLEDQVANAAAQVQQSE
LQISDIEARISALKNAGLNVSVCPRFPRLKEIPVPQTLDSSRQQRRKLPAPPSIEKSEAE
SRSLEP
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaaactggacctttcaggactgactgatgatgaggcagatcatgtgctcaga
gtggtacggagagatatgagtctgcgcaagaaagaggaggatcgcctcagtgatttgaag
catgagctggaggaggagggcgcacgctgtctgctgctggccaagcagcgcggctttaat
gagcaatgctgcattcgctgctgtgggccattcggcttctttctcaagccacgccgtgtc
tgcctcaactgtcgctacaacgtttgcaaagcctgctgctcctacagccaacaagagaat
ggctatgtctgtaccttttgccacaagagcagggtcctgagggcccagtctttggagtgg
tattataacaatgtcaagagtcgctttaagaggtttggcagcgctaaagtcttcaagacc
ctctacaggaagcacattattgagagaggagcattgtcagagttggcagagatgagcgct
cccgaaggtagcaatgataacgatgggactgtgtgtggcagtgattcggcattctccaag
caaagtgaaagtcacaccatagcagagactctcactgttgccctacgtgttgctgaagag
gccatagaggaagcaatcactaaagcagagggctacagggacagtctggagaagcagaat
gaggctcgatatctgcgtgatcatcgagaggaactcgtagaggaacttgcagccacaatt
attcagaaaataattcagagggggaagcagcgctcagagatgcaggcagagtatgatttt
gtttggtctcagactcacaacagtgacctgccctcccctacctcatcccaaaatccgctc
tgctccagaccatctcacaagacctcctctccttcttcactagtccaggctgatggaagt
ggtaggtccctatcagcattatccctgactagtgatgagtccacaggcaaaatgcctgaa
gcagacaaggtgtctgaagctgcagaaccagagcgaaatcttgagatttactcatcattg
cagagagagtcacgagcatccatactggggtggaaaaatgtggaccgtctggacaacacc
agtgcttcctctgtgctacagtctccggatgggaactggattgccttgcaggcttcccag
cattcccggccaagcctgctaaccaaacgtaagagcttggtgttcagtgtgctagaaaag
gagtctggcgtggtttcagcatacgacgagatggggtcagattcagaggatggagcagaa
cttgatagctggggacttgcactactacaattccgccagcgtctctcagaagaaacacgt
tctttggatgctcaacgcaacacagagcactatccaccaataacctcaccctcctcgggc
catttcaccaacacagagaccttaaactcagattctgagaactctacagctccccctact
cgaacacacatccctgttcttaatgtcacccagagaaacaaagtttcacctgaaccctac
cttccctacaagctctatgagcacgacagacctgctgatagtctgtcacattcaccaagg
cttggtgcaatggatgtgaactttaatcctcaggtggttggggacagcagtgatggggag
gagaaagccgagcagatccgaaggttccggcgtaagaagcggaacaaacacgagtcagct
gagcagagctgtgtccatagtggactgtacacaggggagaacagcactctcctgctcagc
accatgatgatgaaacgacaagatagccaagagactctgtcatctcttccacctcccacc
tatgaatctccagatactgtgacaccacccaaccgtgtgacctccactgccatgacccct
gaatctgtgtaccagaacacagtagcctataaccctgtgctccccagtccaccgatgcat
aaccaatctgaaaatgccaccctggaccatgaactgagatcaaaactctatgaactggtt
catcaaatcagtaaggaggacctgacctcatcagatgatgagccaatccaaaaagtcatt
gatcggcgctatgatggagcgagggagaaagaaaatgatagagtaagacacagaaagaga
aataatgaggcacagaaagagagtaatggcaaaacagagatggagaggaataaaaggaaa
atggagagactgagtgaaagatggatagaaagacaggttagaagagagtgtgaggaaatt
gatgtggtgaggcagcgacataaagagagggatcagaaaagagaaggaaatgatgaacta
gtgagacgaatggaaaaacaccaaaatttggacagacaacaaaaaacagagagtcaaaga
caagtcgaaaggaattggcaagtcagacaagtggagacagaaagtgagaatgaaagagaa
gcagaaaaaatgaagccggtagaaacagagccacatatgctagctcgagtcaatgggctt
agcatgagaagagatctacaagagaatgaaacacagcaagtgacgataaatactgagaaa
gccaaagatggctgggttgatataaagaagagtgtggaagaagaacacagtgagaaagga
ctttatttgaccgaggagaaggtaaatcaagggttgcgacagagaagcaactcagagaga
gaatctgaaaaaagagcagaaccgcacaaccacagtgccccgattgacccggaggagcaa
atgtctcaaacagagaagtatccagccgcttccctatgcagcatcaccacagaggttctg
aaggtcctaaatgccacagaggaattaatcggagaagctgaaggcaaaggtcatgacccc
cacgagtccccaactgggacaccactctcttctggatcagacagcagaaaactggaccag
gatcttaccaagatggaagagaatgtatacttggctgcaggaactgtgtatggcctggag
ggggcactgagtgatctggaggactgcgctcgcagcatcagcagttccacgactgaaaca
gaattggccttcctggaggatcaggtggccaatgcggctgctcaagtgcagcagtctgag
ctacagatctcagacattgaagcaagaatatcagcacttaaaaatgctggcctgaatgtg
tcagtgtgcccacgatttcccaggctcaaggaaattcctgtacctcagactttggattcc
tcacgtcagcagagaagaaagctgcccgctccaccttccatagaaaagtcagaggcagag
tcgagatctttggagccatga
DBGET
integrated database retrieval system
