Neoarius graeffei (lesser salmon catfish): 132867270
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Entry
132867270 CDS
T10798
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ngra01001
]
132867270 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132867270 (prpf4bb)
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132867270 (prpf4bb)
Protein kinases [BR:
ngra01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
132867270 (prpf4bb)
Spliceosome [BR:
ngra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132867270 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
132867270
NCBI-ProteinID:
XP_060756051
LinkDB
All DBs
Position
19:40182253..40221429
Genome browser
AA seq
1028 aa
AA seq
DB search
MADVEMDIQSERLNNGKEDLESSQKSGNENSEVSEEEEEGTAPEEINGGNRDETSKHHSG
RKHKKKKHKHRSKHKKHKHGSEAEKEHKRKHKHKHKKHRRKEGTPPPSGAIDRKADDVSP
SSENPNVDDRALLEDLEKQRALIKAELDSQLMEGKVQSGMGLILQGYNSGSEEDAERQRP
RNGEQCQKGSVGKTRSPRDHSSRGGKARQDLPDNKTSTKRHSRSTEKDRAARESRGSRLS
NSGKEIAKECSRPTDRSCSRSQNRSRERVKKSQSPSSKRRSEERKPEQKGCSSEVKEVRT
ETHPSPRAEERRTTQEQGRQRSDSPAHSRNRTSHSKDGRLEADRDKRPGKSPSKDASSGK
ENRSPRYRRASDSQCCRSSSTHRRERQSRQAASSGSKQSYSPSRHRSPARRGHSRSADRR
RVSPSRFTVQTRSHGITFHRKRSRVDGTGRSYETSPARRRVSRSPLRRRSLSPRRQSRPS
PRRRSRSPFRRRSDERDRFGYTRARRSTSRERERRKRRSRDEDKYKGSLSEGMKVDQDSS
SDDVMEDFDAEEEDEEALIEKRRQQRLAIMQKYRTVNEDSNIGSMASEPSSPQSSTRSRS
ASPDDILERAAADVKEYERENVNTFEANVKAKHNLIAQEKEGANPKKPSAPDMFTESDDM
FAADFDSARLRAVGVGKDFKENPNLRDNWTDAEGYYRVNIGEMLDKRYDVYGYTGQGVFS
NVVRARDTARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYH
KQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPD
NILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTL
YELYTGRILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTE
REKVTVMSTINPTKDVLADLIGGQRLPEEQRKKVMQLKDLLDGTLMLDPAKRISINQALQ
HSFIQDKI
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggaaatggacatacaaagcgagaggctgaataatgggaaagaagatttg
gagagctcacagaagagtgggaatgagaacagcgaagtgtctgaagaggaggaggagggc
acggcaccagaggagataaatggggggaaccgggacgaaacttccaaacatcacagtggc
cgcaaacacaagaaaaagaaacacaagcaccgcagcaagcacaaaaagcataaacatgga
tctgaggcagagaaggagcacaagcgcaaacacaaacacaaacataagaagcacaggcgc
aaagaggggacaccacccccttcgggagccattgacaggaaggctgacgatgtatcccct
tcttctgagaacccaaatgtcgatgaccgggctttgctggaggacttggagaagcagcga
gctctgatcaaagctgagttggacagccagctgatggaaggtaaggttcagtcaggaatg
ggccttattctgcagggctataactcaggctctgaagaggatgcagagagacagaggccc
cgaaatggagagcagtgccagaaaggcagtgtggggaaaacacgctcaccaagggaccat
agcagcaggggtggcaaagccagacaggacttgccggacaataaaacgagcacaaaacgc
cacagccgttctacagagaaagacagggcagcaagggagagcagaggcagccggttgagt
aatagtgggaaagagatagccaaggagtgcagtagacccacagacaggagctgttcacgg
agccagaaccgatctcgtgagagagtcaagaaatcgcagtctccatccagcaagaggcgc
tcagaagaaagaaaacccgagcaaaaggggtgctcgtctgaggtaaaggaggttcgaaca
gaaacgcacccctctccccgtgcagaggaaagaaggactactcaggagcagggcaggcag
cgttcagattcaccagcacactcgcgtaatcggacgtctcattccaaagatggccgcttg
gaggcagatagggacaagaggcctggcaaatcaccttccaaggatgcctcgtctggaaag
gagaaccgctcgccacgttacaggcgggcatcggattcacagtgctgtcgaagttcttcc
acccaccggagggagcgccagtcccgtcaggcagcatcatctggatccaaacagagctac
tctccttccaggcaccggtcccctgcaaggaggggccacagtcgctcagctgatcgcaga
agagtctcgccatctcggtttaccgtccaaacgagatcacatgggattacctttcacagg
aaacgctcccgtgtagatggaactggaaggtcatacgagactagcccagcacgacgaagg
gtcagccgctcgccactcagacgacggtctctgtccccacggcgacaatcacgcccttca
ccgagaagacggagtcgatccccttttagacgaaggtctgacgagagggatcggttcggc
tacaccagggctcgtcgctccacgtccagagaacgtgagcgcaggaaaaggcggagccga
gacgaggacaagtacaaggggagtctgtcggagggtatgaaagtggaccaagattcttcc
tcggacgatgtaatggaagattttgatgccgaagaggaggatgaggaggctctgattgaa
aagcgacggcagcagcgactagcaataatgcagaaatacaggacagtaaatgaggacagc
aatataggctcaatggcatcagagccgagcagtccccagagcagcacgcgcagtcgctct
gcctcaccagacgacatcctggaacgcgctgctgctgacgttaaggagtatgagcgtgaa
aatgtgaacaccttcgaggccaatgtgaaggccaagcacaacctcattgcccaagagaag
gagggagccaacccaaagaaaccctctgcccctgacatgtttacagagtcggatgacatg
ttcgctgcagattttgatagtgccaggctcagggctgttggagtcggcaaagattttaag
gaaaacccaaatctgagagacaactggactgatgctgaaggatactatcgtgtgaacatc
ggtgagatgctggataagcgctatgatgtctatggctacacagggcaaggtgtattcagc
aatgtggtccgagccagagacactgcccgtgctggccaagaagtggcagtcaagatcatc
cgtaacaacgagctcatgcaaaagacagggctgaaggagctggagtttctgaagaagctt
aatgatgctgatccagatgataaattccattgcttgcgcctcttcagacatttctaccat
aaacagcatttatgtctggtgtttgagcctcttagtatgaatcttcgtgaggtcttgaag
aagtatggtaaagatgtaggtcttcacattaaggcagttcgttcctacagccagcagctc
ttcttggccttaaagcttctgaagcgctgtaatattctacatgctgacatcaaaccagac
aacatactggtgaacgaatcgaaaaccatcctcaaactgtgtgattttggttcagcctcc
catgttgctgataatgacattacgccttacctggtcagcaggttctatagagctcctgag
atcatcatcgggaagccgtatgattatggaattgatatgtggtcagtaggttgcactcta
tacgagctttatacaggaaggatcttgtttcctggctcctccaacaaccatatgatcaaa
ctggccatggaccttaaaggaaagatgcccaataagatgattcggaagggtttgtttaaa
gatcaacatttcgaccagaacctaaactttctgtacatagaagtggacaaagtgactgaa
agggaaaaagtgaccgtgatgagcactattaaccccactaaagacgtgctggcagacctg
atcggtggccagagactcccagaagagcagagaaagaaagtgatgcagctgaaggatctg
ctcgatggcaccctgatgttggaccctgctaagcgcatcagtataaaccaagccctgcaa
cattcattcattcaggacaaaatctga
DBGET
integrated database retrieval system
