Neoarius graeffei (lesser salmon catfish): 132867348
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Entry
132867348 CDS
T10798
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04514
Cell adhesion molecules
ngra04810
Regulation of actin cytoskeleton
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132867348 (itga8)
04514 Cell adhesion molecules
132867348 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132867348 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132867348 (itga8)
04810 Regulation of actin cytoskeleton
132867348 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132867348 (itga8)
Cell adhesion molecules [BR:
ngra04515
]
Integrins
Integrin alpha subunits
132867348 (itga8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
132867348
NCBI-ProteinID:
XP_060756186
LinkDB
All DBs
Position
19:48984641..49270069
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AA seq
1056 aa
AA seq
DB search
MLARRARASFRDLFCLLIPVSLICCGFLCGIVAFNLDLEKPAVFGGPGGSYFGYSVDFYH
PTQDRRAVSVLVGAPKANTTQPGIVEGGSVYYCSWPPSEQDSCREIPFDKANNRMVKVNG
TREPLEFKSYQWFGATVRTHRGKVVACAPLYHWRTVKISGEMDPVGTCYVAVQNFSAYAE
YSPCRTNNPDPEGQGFCQAGFSVDFTKDGTLVLGGPGSFYWQGQVITAGVAEILNGYSLK
AILRKVQGEKETAAASDIYDDSYLGYSVAVGEFTGDSQQELVAGVPRGAQNFGYVAVINS
TNLTLIQNFTGEQMASYFGYTVAVTDINGDGLDDVLVGAPLYMDREFESKPREVGRVYLY
LQEDTLFFSPAVTLTGIHLFGRYGSTIAPLGDINQDGYLDVAVGAPFAGEDRGGCVFIYN
GERSGLKLKASQVLKGSWASTGIPAGFGFSLRGDSDLDNNQYPDLIVGAFGVDKVVVYRA
RPVVTVDAQLILTPKILNPENKTCFMSNSHIMVSCLRVDICAKVSGIGITDSVALNMELQ
LDSLKQRGAVKRVLFLDSQQHHRSLRLLLGQRDRQRCLNHTIYLLDETEFRDKLSPISVA
LNYSLDQTSPLSGLQLRPILDHYSMTLHREQANILLDCGEDNMCVPDLELSAKMDRTELV
IGDENPLALTIMAANHGEGAYEAELVVRLPPEADYNGMDRRREDGQILNCEHRMENDTQL
VVCELGNPMVAGANVSVGLRFSVQRLEDAEAHIVFELQIHSTNKDNPKSNLVNLTLNIIA
RAQVDIRGVSLPAQVVLPFPHWEPKEKPVREDDVGPQIQHIYELYNKGPSSVSGTVLKVG
WPSRHRDEHLLYAMEIITDGPIRCHINGSLNPLGLEISTMQDTPELLGFLRNSSGPTRRR
RSVTTTHSYSSKTLNCSNIYCLMLDCIVGRLDQGQSAVVKVRSRLWAHTFLQRRNDHYLV
NSTVDFRVTGMPYRIKPQTLPQQNNSIGTYVVWAIPDLSFAIPLWVIILAILLGLLVLAI
LTLVMWKCGFFDRARPPKDDDVSDQEQLTAEKSPEA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgcggcgggctcgagcgtctttccgtgaccttttttgtcttctcatcccggtt
agtctgatctgctgcggttttctttgcggaatcgttgctttcaacttggatttggagaaa
cccgcggtgttcggtggacccggtgggagctactttggatactcagtggacttttatcac
cccacgcaggacaggagggctgtgtcagtgctggtcggggctcccaaagccaacaccact
cagccggggattgtggaaggcggttcggtttattactgctcctggcccccatctgagcag
gactcctgccgcgagatccctttcgataaagcaaataacaggatggttaaggtgaatgga
acacgggagccgttggaattcaaatcctaccagtggtttggagctactgtccgaacacac
aggggtaaagtagtggcctgcgcacctctgtatcactggcgaacagtgaagatcagtggt
gagatggatccagtgggcacgtgctatgtggctgtgcagaacttcagtgcctatgcagag
tactcgccttgcagaacaaacaatccagaccctgaaggacagggcttctgtcaggccggc
ttcagcgtggacttcaccaaggacggtacattagtactcggaggaccagggagcttctac
tggcaaggtcaagtgatcactgcaggagtagcggaaatcttgaatggctactccttgaag
gcaattctccgaaaggtgcagggagagaaagagacagcagccgcctcagacatctacgac
gacagctacctgggatactctgtcgcagtgggagagttcaccggtgattcacagcaagag
ctggtagcaggagttcctcgaggagcacagaacttcggttatgttgctgtgatcaactcc
acaaatctcaccctcattcagaattttactggagagcagatggcttcatattttggatac
actgtggcagtgacggacattaatggagacgggttggatgatgttcttgtcggagctcct
ctgtatatggatcgggagtttgagagtaagccacgagaggtgggccgggtttacctctat
ctacaggaggacacactattcttctcacctgccgtaacactcactggcatacacctgttt
ggacgctacggtagcaccatcgctcctcttggagacatcaatcaggatggttatctggat
gtggcagtgggagctccgtttgcaggcgaggaccgtggcggttgtgtgtttatctataac
ggtgagaggtctggcttgaagctgaaggcctcacaggtgctcaaaggatcctgggcttcg
actggaatcccagcaggctttgggttttcgctgcgtggggattcagacctggacaacaac
cagtaccctgatctaattgttggtgcttttggagttgacaaagtagtggtgtacagagca
agacctgtggttacagtagacgctcagctcatcctcactcccaaaatcctcaacccggag
aacaagacctgcttcatgtccaactctcatatcatggtttcctgtctgagagtggacatc
tgtgctaaagtctctggtattggaatcacagacagcgtcgctctgaacatggagctgcag
ttggactcactaaagcagcgaggtgctgtgaagcgggttctgttcctcgactcacaacag
caccaccgctcgctgcggctgcttctgggccagcgagatcgccaacgatgccttaaccac
accatctacctactggatgagactgaatttagagataagctgagtcccattagtgtagct
ctgaactacagcctggatcagacgtctcctttatctggcctccagctacggcccatactg
gaccactacagcatgaccttgcaccgtgaacaggcgaacatcttgttggactgtggcgag
gacaacatgtgtgtcccagatcttgagctctctgctaaaatggaccggacggagttggtg
attggcgatgaaaacccattggcgctgaccatcatggcagccaatcatggagaaggtgcg
tatgaggcggagcttgtggtgcgtctcccaccagaggccgactacaatggcatggatcgt
cgacgggaggacggacagattctgaattgtgagcacaggatggaaaatgacacccagctg
gttgtgtgtgaattaggaaacccaatggtggctggagcaaatgtatctgttggtttgcga
ttctccgttcagaggttagaagatgctgaagctcacatcgtctttgagctgcagatacac
agcaccaataaagataacccgaagagtaaccttgtgaatttgactctcaacatcatcgca
cgagcacaggtggacatcagaggtgtctctctcccagctcaagtagttcttccttttcct
cactgggagcccaaagagaagccagtcagagaggatgatgttggtcctcagatccagcat
atctacgagctgtataataaaggtccaagttctgtgagtggcacagttttgaaggtggga
tggcccagtcgtcatcgagacgagcatttgctctatgccatggagatcatcactgatgga
ccgattcgctgtcacatcaacggctcacttaacccactgggacttgagatatccactatg
caagacactccagagctgctgggtttcctgcgcaacagcagcgggccgactcgtcgcagg
agatctgttaccaccacacacagctacagcagcaaaacactgaattgctctaatatctat
tgcctgatgctggactgcattgtgggccgtttggatcaaggacagagtgcagtggtcaaa
gtccgctcaagactctgggctcataccttcctccagaggcggaatgaccactacctcgtc
aactctacggtagacttccgagtaacaggcatgccgtaccgtatcaaaccacagaccctg
ccgcagcagaataactcgatcggtacatatgtggtctgggcaattcctgatctgtccttt
gctattcctctgtgggtgattatactggccatcttactgggactgctggtgctcgccatt
ctaaccctggttatgtggaagtgtgggttttttgatcgagcacggccaccgaaagatgac
gacgtctcagaccaggagcagctgacagccgaaaaatcgccagaagcatga
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