Neoarius graeffei (lesser salmon catfish): 132867414
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Entry
132867414 CDS
T10798
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132867414 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132867414 (ubr5)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132867414 (ubr5)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
HECT type E3
132867414 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
132867414
NCBI-ProteinID:
XP_060756294
LinkDB
All DBs
Position
19:54005513..54116577
Genome browser
AA seq
2823 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNCNSHPQLNLLEQAMLKQCVVGPNHAGF
LLEDGRICRISFAVQPDRLELGKPDGNDGSKLSSGSGAGRTSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVGGGGGGSGGSGGGGTGGGGGSGGGGGGGASGGGGASSGRSSAAA
RDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIRELQR
TNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAMF
SEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDAE
RGSTSRDGEPSLDKKSVPLQSPVSLGEELQWWPDKDGVRFVSIGAMFSELVAVSSKGELY
QWKWNEPEPYRNSQNPSIHHPRVSFLGLNSEKITLLSANSIRATVATESNKVATWVDDTL
SSVACKLEHGAQTFPELQGERIVSLHCCSLYTCAQLETSLYWWGVVPFSQRKKMLEKARA
KNKKPKSSAGIASIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGVLLESVWNMNDS
CRFQLRSPESLKSMEKSAKSQETKAELKPEMVKTEMGPPPSPASTCSDTSSIASSASLPY
KRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSVSS
QSAAPTDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAEILAVNV
DSKGVHAVLKTGSWVRYCIFDLATGKAEQENHFPTSNLAFLGQSERNVAIFTAGQESPII
LRDGNGTIYPMAKDCMGGIRDPDWLDLPPISSLGIGVHSLANLPNNSTIKKKAAVIIMAV
EKQTLMQHVLRCDYEACRQYLMGLEQAVLLEQNPHALGALLGHRCDGNRNLLHACVSVCF
PVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRGLRLREM
MRRSLRAASMSRHESGPSSGEHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAPAVGSLT
TASSGPTQGPSTSTIPGPSSEASVVESKDRKANAHLILKLMCDSVVLRPHLRELLSAKDA
RGMTPFMLAVSGRAYPAAITVLEAAQKIAKGESNIGDKDDVNSVFMEMICPAGTNPDDSP
LYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPT
AYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTSPNSRGEHILLFLVQTVARQSVE
HCQYRPPRIREDRNRKAVNAEDSDMPDHDLEPPRFAQLALERVLQDWNALKCMIMFGSQE
NKDPLSASSRIAHLLPEEQMYLNQQSGTIRLDCFTHCLIVKCAPDLTFIDTLLGTLVKEL
QNKYTPGRREEAICVTRRFLRSVARVFVILSVEMASSKKKNNFVPQPIGKCRRVFQALLP
YAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPRPSPDQSN
NSSQSASSYIIRNPQPRRSSQSQTARGRDEEQDDIVSADVEEVEVVEGVAGEEDHHDDQE
EQGEEPAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSVVTAATAG
SEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDADQETYLLDEPLERTTGSAHANSAAQ
APRSMQWAVRTTPSQRAAGGAPTSSSTPAASSAGLIYIDPSNLRRSSAISTSAAAAAAAL
EASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPAAVKLTYQDAVNLQN
YVEEKLVPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQHSGRRERMTAREE
ASLRAMDGRRRTATLLTARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVA
YVFQALIYWIKAMNLQTTLDTSQMDRKRNRDPLELALDNEDSEHENDEDTNQSSTLQDKE
EEPVPAETGQHHPFFRRSDSMTFLGCIPPNPFEVPVAEAIPLADQPHLLQPNARKEDLFG
RPSQGLYSSSYMASKGLSELTVDMNCLQILPTKMSYSANMKNVMSMESRQRGGEEQQTVA
QDIDVSKPGPSPHDLAAQLKSSLLAEIGLTESEGPPLPTFIPHCSFMGMVISHDMLLGRW
RLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDLALEVDRDRD
QLIQQTMRQLNTHFGRRCTSTPMAVHRVKVTFKDEPGEGSGVARSFYTAIAQAFLSNDKL
PNLDCVQSVSKGMQASNLMQRLRNRDRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPFR
PASEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKITGMLLELSPAQLLLLLASED
SLRARVEEAMELLITHGRENGADSILDLGLLDTPEKTQQENRKRHASTRSVVDMELDDTD
DGDDNAPLFYQPGKRGFYSPRPGKNSEARLNCFRNIGRILGLCLLQNELCPITLNRHVIK
VLLGRKVNWHDFAFFDPVMYESLRQLIRHSQASEAEAVFAAMDLAFAIDLCKEEGSGQVE
LLAGGGSMPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAEDFR
LLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSS
PSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNF
GFV
NT seq
8472 nt
NT seq
+upstream
nt +downstream
nt
atgacctctattcacttcgttgtgcacccgttacccgggactgaggaccagctcaatgac
agacttcgtgaagtatctgaaaagctcaacaagtacaactgtaacagtcatccacagctt
aacttgctggagcaggccatgctgaagcagtgtgtagtcggaccaaaccatgctggcttc
ctgcttgaggatggacggatctgcaggataagctttgctgtacagccagatcgactggag
ctgggcaagccagacggaaacgatggttcaaagttgagcagtggctcaggggcaggaagg
acctccaggccaggtaggactagtgatccgccctggttcctgtctggttctgacactttg
ggccgactggcaggcaacacccttgggagccgctggagttcaggagttggcggaggaggt
gggggcagcgggggcagtggtggcggaggaacaggaggaggtgggggcagtggtggagga
ggcggcggaggggctagcggagggggaggagcatcctctggtcgctcaagcgccgcagca
cgtgattcgcggagacagacacgcgtcatccgtacgggcagagaccgagggtcaggtctg
ctggggagccagccgcaaccggtcataccagcatccgtcattcctgaagagctcatctct
caggcccaggtggtcctgcaaggcaaatcgaggagcgtcatcatccgtgagctgcagcgc
accaacctggatgtaaacctggccgtgaacaacctgctgagccgagatgacgaggacggg
gatgatggcgatgacacagccagcgagtcctacctacctggagaagacctgatgtcgctg
ctggacgccgatatccactctgcacaccccagcgtcatcatcgacgctgacgccatgttc
tcagaggacatcagctacttcggctacccatccttccgacgctcgtcgctgtcacgcctc
ggctcctcacgagttctccttcttcccttagagcgcgactccgagctgctgcgcgagcgc
gagtccgtgctgaggctccgcgagagacggtggctggacggcgcgtcctttgacgcagag
cgcggctccaccagccgggacggagaaccgagcctggacaagaagagtgtccctctgcag
agccctgtctctctgggagaggagctgcagtggtggcctgataaggatggtgtcaggttt
gtaagcatcggggcgatgttctccgagctcgtggctgtcagctccaaaggcgaactttac
cagtggaagtggaacgaaccagaaccttatagaaactcacaaaacccttccatccatcac
cctcgcgtgtccttcctcggactgaacagtgaaaagatcacgctcttgtctgctaacagt
attcgggccacggtggctaccgagtccaacaaggtggcaacgtgggtggatgacactctg
agttctgtagcgtgtaagctggaacacggggctcagacgttcccggagctgcagggtgaa
cgcatcgtgtctctgcactgctgctctctgtacacctgtgctcagctcgagaccagcctc
tactggtggggtgtcgtgcctttcagtcagcgcaaaaaaatgcttgaaaaagccagggct
aagaacaagaagcccaaatccagtgccggaatcgcctccattcccaacattacagtgggc
actcaggtgtgtttgaggaacaatcccctgtatcacgcgggtgctgtggccttctcagtg
aacgccggcattcccaaggtgggggtcctgctcgagtccgtgtggaacatgaacgacagc
tgccgcttccagctccgctctcctgaaagcctgaagagcatggagaagagcgccaagtcc
caggagaccaaggcggagctcaaacccgaaatggtcaaaacagaaatgggtcctccaccg
tctccggcctctacatgcagtgatacctcctccattgccagcagtgcctctctgccttat
aagcggagacgctccacaccggcgcctaaagaggaggagaaggtcaatgaagagcagtgg
cctctacgcgaggtcgtgtttgtggaggatgttaaaaatgtcccagttgggaaggtgcta
aaagtcgatggtgcatatgttgctgtgaaatttccagggacgtcgagcagcgtgagcagc
cagagtgcagctcccactgactcggacccgtcctcactcctgcaggactgcaggctgctc
cgaatcgatgagctacaagttgttaaaactggtggaactcctaaagttccggactgtttt
cagcgcacacctaaaaaactttgtattccagaaaaggctgaaattttagctgtgaatgtt
gactccaaaggagtccatgctgttcttaaaacaggaagttgggttcggtactgtatattt
gacttggccactggcaaagccgagcaagagaaccatttccctacaagtaacctggccttt
ctgggccagagcgagcgtaatgtggccatcttcactgctggccaggagagccctatcatc
ctgcgggatggcaacggcaccatttacccaatggccaaagactgtatgggtggcatccgt
gaccctgattggctggatctgccgcctatctctagtttgggaatcggcgttcactcactt
gccaacctgcccaataactccacaatcaaaaagaaagctgcggtcatcattatggcggtc
gagaaacagacgttgatgcagcacgtgttgcgctgcgattacgaagcgtgtcgccagtac
ctgatgggtttggagcaggccgtgctcctggaacaaaaccctcacgcgctcggcgctctg
ctcggccatcgatgtgatggaaacaggaaccttctgcatgcctgcgtctctgtctgcttc
cctgtcagcaacaaggagaccaaggaggaggaagaagctgaacgctcagagcgaaacacg
ttcgctgagaggctgtctgcagttgaagccatcgctaatgccatttcagtggtgtccagc
aacagctcgggaaacaggaccggatcgtctagcagtcgtgggcttcgcctccgagagatg
atgaggcgctcactccgagctgcctcgatgagccgccacgagtctggtccctcctccggt
gagcaccaggatcctgtgtcgccacccattgcacctcctagctgggtgccagaccctcca
cctatggatcctgatggtgacattgatttcatcttggcccctgcagtcggttcgctcact
acggcgtcctctggccccactcaaggtccgagtacatccaccattccaggcccgtcatct
gaagcatccgtggtggaaagcaaagaccgtaaggccaacgctcacctgatcctcaagctg
atgtgcgacagcgtcgtcctgagacctcatttacgagaactgctctctgcaaaggatgca
cgaggcatgactccgtttatgctagccgtcagcgggagggcatacccagcagccatcact
gtcctggaggcagcccaaaaaatagccaagggagagtccaatatcggggacaaggacgac
gtgaactctgtgtttatggaaatgatctgtcctgcggggacaaaccctgatgactcgccg
ctctacgtgctctgctgtaacgacacctgcagcttcacctggacaggagctgagcacatc
aaccaggacatctttgagtgcaggacatgtggtttgctggagtctctgtgttgctgcacc
gagtgtgccagagtttgccacaaaggacacgactgcaagctaaagagaacatctcccact
gcatactgtgactgctgggagaagtgcaagtgcaaaaccctgattgctggacagaaagcg
gcacgtctggacctgctctataggctgctgacaaccaccaacctagtgacgagtcccaac
agcaggggtgagcacatcttgctattcctggtgcagacagttgcacggcagagtgtggag
cactgtcagtaccggccgccccgtatccgagaggacaggaaccgcaaagctgttaatgca
gaagactctgacatgccggaccatgacctagagcctccacgctttgcccagctggctctg
gagcgcgtgctgcaggactggaatgctcttaagtgcatgattatgtttggctcacaggaa
aacaaagatccgctgagtgcgagcagccggattgctcatctcttgccggaggagcagatg
tacctgaaccagcagagtggtacaatcaggctggactgctttactcactgcctcatcgtc
aagtgtgctccagacctcacttttatcgacacactgttgggcacactagtgaaggaactg
cagaacaaatacaccccaggtcgcagagaggaggccatctgcgtcacacgtcgcttcctg
cgctctgttgccagagtatttgtcatccttagtgtagagatggcatcgtccaagaagaaa
aataactttgtcccgcagcccattgggaagtgcaggcgtgtgttccaggcgctgctgcct
tatgccgtcgaggagctgtgtaacgtagcagagtctctgattgtgccagtgcgcatgggc
atcgccaggccaacagcaccattcacactcgccagcaccagtatcgatgctgtgcagggc
agcgaggagcttttttccgtagaaccgctgcccccacgcccctcacctgatcaatccaac
aattccagccaatcagcttcctcttacatcatcaggaaccctcaaccacgacgcagcagc
caatcccagaccgcacgtggacgagacgaggaacaggacgacattgtgtctgctgatgtc
gaggaggtggaggtggtggagggggtcgctggggaggaagatcaccacgacgaccaggag
gagcagggggaagagcctgcagaagctgagggacagcatgatgaacacgatgaggacgga
agtgacatggagctcgatctgttagctgctgctgagacggagagcgacagcgaaagtaac
catagcaaccaggacaatgcgagcgggcgccgcagtgtcgtcactgcagcgacagcaggt
tctgaagcaggtgccagcagtgtgcctgccttcttctccgaggacgactcccagtcaaac
gactcaagtgactcggacagcagcagcagtcagagtgatgacgccgatcaagagacgtac
ctgctggatgaaccgctcgagagaactacaggctctgctcatgccaacagcgctgctcag
gccccacgctccatgcagtgggcagtgcgcaccactcccagccagcgtgcagctggtggt
gcccccactagctcctccactcctgcagcgagctctgcaggcctcatctacatcgaccca
tccaatttgcgccgcagcagcgccatcagcaccagtgcagcagcggcagctgcggccctg
gaggccagcaactccagcagctacctgacatctgccagcagcctggcaagagcctacagc
attgtcatccggcagatttctgacctcatgagccttatccccaaatacaaccacctggtt
tactcacagtaccccgctgcagtgaaactcacctatcaggatgcagtcaacctacagaac
tatgtggaggagaagctggtcccaacgtggaactggatggtgtccatcatggactcaaca
gaggctcagttacgctacggctcggctctgtcctctgcgggagatcctgggcacccaagc
cacccgctgcatgcctcgcagcactccggccgcagggagcgtatgactgcgcgtgaggag
gccagcctgcgagcaatggacggacgcaggcgtacggctaccttgttgactgctcggcag
ggcatgatgtctgcgcgtggagacttcctgaactatgcactctctctgatgcgctcccat
aatgacgagcactctgatgtgctgcccgtgctggatgtgtgctcactgaaacacgtggcc
tacgtcttccaggctctcatttactggataaaagccatgaacctacagaccacgctggac
acctcacagatggacaggaagaggaatcgtgacccactggaacttgctttggacaacgag
gactcggagcatgagaatgatgaggacaccaatcagagctccacccttcaggataaggag
gaagagcctgttcctgcagaaacaggtcagcaccacccattcttccgtcgctctgactcc
atgacctttctcggctgcattccgccaaatcctttcgaagtccccgtggccgaggccatc
cctctggctgaccagcctcacttgctgcagccgaatgcaaggaaggaggacctgttcggg
cggccgagtcaaggcctttactcgtcctcctacatggcaagcaaaggtctctcagagctc
actgtggacatgaactgtttacagattctgcccacaaagatgtcctattcagccaatatg
aaaaacgttatgagtatggagtctcggcagaggggtggagaagagcagcagaccgtagca
caggacatagatgtgtcgaagcctggcccgtccccccatgacctcgctgcccagttaaag
agcagcctccttgcagagattggactgactgagagtgaaggcccaccccttcccactttc
attccccattgtagcttcatgggcatggtcatctctcacgacatgctgctgggaagatgg
cggctctccctcgagctcttcggccgcgtctttatggaggatgtaggggcagaacctgga
tctatcctgaccgagctgggtggtttcgaggtgaaggagtccaagtttcggcgggagatg
gagaagttgcggaacctgcagtctcgtgatttggccttggaggtggaccgtgaccgtgac
cagctcatccagcagactatgcgtcagctcaacacgcactttggccgccgctgcactagc
acacccatggctgtgcaccgcgtcaaggtcacgttcaaggacgagcctggcgagggcagc
ggcgtggcacgcagcttctacacagccatcgctcaggcctttctgtcgaatgacaaactg
cccaacctggactgtgtacagagtgtcagcaagggcatgcaggccagcaatttgatgcag
cgcttgagaaaccgagaccgggagagggagaggaggagtggtggcctgagggcaggatcc
cgaagagaccgcgacagggactctcggaggcagctgtccattgacaccaggccgttccgt
cctgcatcagaggggaaccccagtgacgagccggacccgctacctgctcacagacaggct
ttaggggagcgtctgtacccccgtgtccatgccatgcagccggcgtttgccagtaaaatc
acaggcatgttgctagaactctcacctgctcagctgctactgctgttggccagtgaggac
tctctccgagcccgtgtcgaggaggccatggagctcctcatcacacacggaagggaaaat
ggtgccgacagcatactggatcttggtctgctcgacactccagagaaaacacagcaggag
aatcggaagaggcatgcctccacccgcagcgtggtggacatggagctggacgatacggat
gacggcgatgataacgctcctctgttttaccagcctgggaagaggggcttctattctccc
cggcctggaaaaaactctgaagccaggctcaattgtttccgcaatatcggcagaatactt
ggcctgtgtctcttgcagaatgaactttgccccatcaccctgaatagacatgtcatcaaa
gtgttgcttggtagaaaggtgaactggcacgactttgcgttctttgacccggtgatgtac
gagagcttgcggcagctgattcgccactcgcaggcaagtgaggccgaggcggtgttcgcc
gccatggacctcgcctttgccatcgacctctgtaaggaggaaggctccggacaggtggag
ctgttggcaggcggcggtagcatgcccgtcacccctcagaacgtgtacgagtatgtgcgg
aaatatgctgaacacaggatgctggtggtagcggagcagcctctgcatgccatgagaaag
ggcctcctggacgtcctccctaagaacgctttggaggatctgacagccgaagacttcagg
ctgctagtcaacggctgcggcgaggtcaacgtgcaaatgctcatcagcttcacctccttc
aatgatgaatcaggtgagaacgcagagaagctgttgcagtttaaacgctggttttggtcc
atcgtggagaagatgagcatgactgagaggcaggatctggtgtatttctggacgtccagc
ccgtccctgcctgccagtgaggaaggttttcagccgatgccgtccatcaccatcaggcct
ccggatgaccaacacctgcccacggccaatacgtgcatctcacgcctctacgtgccgctt
tactcctccaaacagatcctcaagcagaagctcctcctcgccatcaagaccaagaacttc
ggctttgtgtag
DBGET
integrated database retrieval system
