Neoarius graeffei (lesser salmon catfish): 132867563
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Entry
132867563 CDS
T10798
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04621
NOD-like receptor signaling pathway
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132867563 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132867563 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ngra04054
]
132867563 (nod1)
Pattern recognition receptors [BR:
ngra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132867563 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_16
ATPase_2
AAA_18
AAA_22
PIF1
RsgA_GTPase
NPHP3_N
ABC_tran
AAA_30
Motif
Other DBs
NCBI-GeneID:
132867563
NCBI-ProteinID:
XP_060756537
LinkDB
All DBs
Position
19:complement(69970916..70009832)
Genome browser
AA seq
946 aa
AA seq
DB search
MMGCVDQDGDEAPVDACRLLTLHREVLVEQVKNTQCILDNLKMNGFICNEDIEIIQRSPT
KTEQVRKILELAQSKGEEASAYFIHILHQAYDAFIDLRPWFNAIHYKPVKCVKDIPVINT
DPISRYSEKLRQELGRDTQFLTSYSQKEETRLEDFYTDTQMEILNERGESLGFLKSLDEI
LGEEGVFNQQAETIFIMGDAGVGKSILLQKLQNLWSKRELNTRAKFFFTFRCRMFSTFKE
TDEISLKDLIFKHNCYPDEDPDSEVFSYILRFPESVLFTFDGYDEIQMDFDLENVPEVVS
PEERTHPLLVLMNLLRGKLLKGSRKILTARTGTEIQSRVIRKKVFLRGFSPEHLKQYLSH
HFPMQEQRDMVSVQLDANPHLCGLCSFPLFSWIIFKSFKHLQSVYDDVELPDSCITLTNI
FLLLSEVFLSRSSKSAGLLKRSTRCTADTFKSGLKMLSAFAKLALLGLEKSSFIYTHDEV
TSCGLSDDEVQVGFLRPISHYDACGTLATYEFLHVTLQAFLAAFCLILDLHVTPDGILRF
FSKCEYHKTSHLTCLSCLGTLSHPRNSDPFQTNEHFQFTNLFLCGLLSKSNAVLLEHLVP
PASLKKKRTALKSYLSSSVKTHLSGLPRYPSTDIKGNKVHVMPNFLWMLRCIFETHSEDV
ARLTAKGISADYLKLAYCNIHSADCSALNFVLHHHRKCLAVDLDNNNISDYGVKQLTPSF
SKMTVVRFSVNQLTDSSVEVLATELIKHKIVKVLGLYKNYITDVGAKLVAQIIDECPHLT
TVKLGCNHITAVGATFLAEAIRKSKSIFEVGMWGNSIGDDGAHAFAEAIKNHSSLTNLSL
SANGITSEGGTSLARALMLNSSLHIFWLIQNKISDDTAVELAKALQKNSALTHLMLIDNQ
FSARGVEKLTEGLKHNTTIKEVNLKGNQISAEDETRFREEKRLRFC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctgtgtggatcaggatggagatgaggctcctgttgatgcctgcaggttactc
acacttcaccgagaggttttagtggagcaggtgaaaaatacacagtgcattttagacaat
ctgaagatgaatggcttcatctgcaatgaagacatcgagatcatccaacgttcacccact
aaaacagagcaggtgcgtaaaattttggagttggcgcagagtaaaggcgaagaggcctct
gcgtattttattcacattctgcaccaggcgtatgatgcattcatcgaccttcggccttgg
tttaatgcaattcactacaaacctgtcaagtgtgtgaaggacatccctgtgatcaacacg
gaccccattagcagatacagtgagaaactcaggcaggaacttggcagagacactcagttc
ctcacctcatactctcagaaggaggagacacgactggaagacttttacacagatacacag
atggaaatcctgaatgagcgaggagagagtctgggcttcctgaagagtctggatgagatt
ctgggggaagaaggtgtgtttaaccagcaggctgagaccatctttattatgggtgatgct
ggagtgggaaaatccattctgcttcagaaactccagaacctgtggtccaaaagagagctg
aacaccagagcaaagttcttcttcacattcagatgcaggatgttcagcacctttaaggag
actgatgagatctcactgaaggatctgatattcaaacacaattgttatccagatgaagac
cctgacagcgaggtgttcagttacatcctgcgatttccagagtctgtacttttcacattt
gatggatatgatgaaatccagatggactttgatttagaaaacgtgccagaggtggtttct
cctgaggaaaggacccacccacttttagttctcatgaacctgttgagaggaaaattgctc
aaaggttccagaaaaatcctaacggctcgaaccggcacagaaatccagagcagagtgatc
cggaagaaagtgtttctgagaggtttctcaccagaacatctcaaacagtatctgtctcat
cattttcccatgcaggagcagagggacatggtgtctgtgcagctggatgcaaaccctcac
ctctgtggtctctgctctttcccattgttcagctggatcattttcaagagctttaagcac
ctccagagtgtgtacgatgatgttgagctgccggactcatgcatcactctcactaacatc
ttcctcctgctatcagaggtgttcctgagccggagcagtaaaagtgctggactcctgaag
agaagcacacgctgcaccgcagacacgtttaaatcagggttgaagatgctctctgccttc
gctaagcttgcactactgggtctggaaaagagtagcttcatttacacccatgatgaggta
acatcttgtggcctgagcgatgacgaggtacaggttggatttctgagacccatcagtcat
tatgacgcatgtggcactttggcaacatacgagtttctccatgtgacactgcaggcattt
ctggctgccttttgtctcatcttggacctgcacgtcactcctgatgggatcctgaggttc
ttctctaaatgtgaataccataagacatcccatttgacctgcctgtcctgtttggggacg
ttgtctcatccaagaaattcagatccctttcagacaaatgagcactttcaattcacaaac
ctcttcctgtgcggcctcctttccaaatccaacgctgtcctcctggagcaccttgttcct
ccagcatccctgaagaaaaagcgcacagctctgaagtcctacctttcttccagcgtaaag
acacacctgagtggcttgcctcgctacccaagcactgacatcaagggaaataaagtgcat
gtgatgccaaacttcctgtggatgttgcgctgtatatttgagacacacagcgaggacgtg
gctcgtctcacagctaaaggaatctcagcagattacctcaaactggcgtactgtaacatc
cactcagcagactgcagtgctctcaacttcgtccttcatcaccacaggaagtgtttagca
gtcgatctggacaacaacaacataagtgactatggtgtgaaacagctcactccttccttc
agcaaaatgactgtagtcaggttttccgtgaaccagctgactgacagcagtgtggaagtt
ttggctacagaactcatcaaacataaaattgttaaggttttgggactttataagaattac
atcacagatgtcggagccaaactggtggcacagatcatcgacgagtgccctcacctcacc
accgtcaagctcgggtgtaatcatattacagccgtgggtgcgacgtttcttgctgaagct
attcggaaaagtaaatcgatcttcgaagttggcatgtgggggaacagcattggagacgac
ggtgctcatgctttcgctgaggcgataaagaaccacagcagtttaacaaatctcagtttg
tcggcaaacgggatcacttctgagggaggaacaagtttagcgagagccctaatgctaaat
tccagccttcacatcttctggctgattcaaaacaagatctcagatgatacagcggtggag
ctagccaaagcgcttcagaagaattcagcgctcacacaccttatgttaattgacaatcag
ttttctgctcgtggagttgaaaagctcactgaaggtctgaaacacaacacaacaattaaa
gaagtcaatttaaaggggaatcagattagtgcagaggacgagacacgcttcagggaggag
aaaagacttcgattctgctga
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