Neoarius graeffei (lesser salmon catfish): 132867945
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Entry
132867945 CDS
T10798
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132867945 (cdh17)
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Major cadherins
132867945 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_3
Cadherin_4
PepSY
CDC48_N
TM_ErbB1
RELT
Motif
Other DBs
NCBI-GeneID:
132867945
NCBI-ProteinID:
XP_060756900
LinkDB
All DBs
Position
19:complement(44510216..44543601)
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AA seq
907 aa
AA seq
DB search
MCQGSWPEVSHEVWCISNGACLSRTTRFELFLIMASLQLLLLLTLLVCSACGAGLDDKKG
QLEDKLLEVQEATPVPYAIFQFISTAEGVSSYLVSGETEGKINISTDGWLYLSEALEWSP
GKKHTLSIGALSADGETVDGPCTVVLHVVDVNNNPPIFDQVQYSGTIREHSPAGSSIVRV
FATDADDPDTPNSQLSYSIESQIPNPTGVAFFTIDPNTGEISTTEEGAASLRARPGVRYS
RGEARGSVDVLKKKFDEFCLPKNEIPVENNPFFTCVQRVESRQLNVMQDPDYTLIVRVED
LGGGAPTALSSITRVNIAVTQNLWISPGLLPIMENLKTDYPMLLTTVRANDPNALYRLVQ
KEREVPFPFTIDEDGNIFVTEPLDRETKDGYTLVVLAVDEQGVELESPMEIHVEVGDVND
NPPECTEAEMVLEVQENEKIGSRVGDLKVHDADEQRNSLLVYSILSQSPTNPSDGMFFID
ETRGTIQVANHNFRRKDVPKYHLKVSVTDGAHSTVCNVVINIIDLNNEIPIFEKNDYGRY
SVPELAEIGDTLLTIKATDADDPGTGSSKVDYHITAGDPDNVFAIEVDDATGEGRIYIAR
PLDYETQSTYNLQIDARNPEPLIEGVNYDDRSTAVVAIELVDVDEPPVFTLDIMNVNIPE
NVTVGTTILTADAKDPEGHKIMFKLEGDEHGWLDLNAETGELKTKATMDREVVDQLTVRI
IAYESEGQMQQTEREVSIQLMDVNDNYPKLQRSRGFICVKKPEPLILTAVDGDAEPFGEP
FTFTLQLTNRKSQNWALVSVNGTSAKLTLKKKPTSDQTISIPVNIKDNAGMGITQKIDVR
VCNCTQMGYCFIAPESPAWKFSLSTTVGILGGVLGFIVLLLGFFICRTKKKGKKETTTAD
GETNAML
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaggggagttggcctgaagtatcacatgaagtttggtgcatctccaatggagcg
tgtctgagtaggacgactcgattcgaattatttctcattatggcaagcctacagctgctg
ctgctcctgactcttcttgtctgctctgcttgtggagctgggctagatgataagaaagga
caattagaagataaactcttggaagtgcaagaagccacaccagtgccatatgctattttt
cagtttatatccacagcagagggcgtgtcatcttatctggtgagcggtgagacagagggg
aagatcaacatatctactgatggctggctgtacctttcagaagcactggaatggagccca
ggaaaaaaacatactctaagtattggggcactttcagctgatggtgaaaccgtcgatgga
ccttgcacagttgttctccatgttgtggatgtcaacaacaatcctcctatctttgatcag
gtccagtatagtggaactatcagagagcattcacctgcaggaagttcaattgtccgtgtg
tttgccacggatgccgatgatccggacacacccaattcacaactgagctacagtattgag
agccaaatccccaaccctactggtgtagctttctttaccattgacccaaacactggcgaa
atttccaccacagaagagggagctgcatcactaagagctagacctggagtgaggtacagt
cgtggagaagctcgggggagtgttgacgttctgaagaagaagtttgatgaattctgcctt
ccaaagaacgagataccagtcgagaacaaccccttcttcacttgtgtccaacgtgttgag
agcaggcaactgaatgtcatgcaggatccagactacactctaattgtgcgagtggaggat
ttaggtggtggggctccaactgcgctgagcagcatcacaagggtcaatattgctgtgact
caaaatctgtggattagccctggcctattgcccatcatggagaatttaaaaacggactac
cccatgttacttaccacggtacgtgccaatgaccccaatgcactgtacagactggtgcag
aaggagagagaggttccctttcctttcactatcgatgaagatggaaatatcttcgtcact
gagccgctggacagagagaccaaggatgggtacaccctggtagtcttggctgtggatgag
caaggcgtcgagctcgaatctcctatggagatccatgttgaggtgggagatgtgaatgat
aaccctcctgagtgtaccgaagctgaaatggtgttggaggtgcaggagaatgagaaaatt
ggtagccgtgtcggagatctaaaggttcatgatgccgacgagcaacggaactcactgctg
gtgtactcgattttgagccagagtcccaccaatccatctgacggaatgttcttcattgac
gaaacacgtggaacgatccaagtggccaaccataacttccgtaggaaggatgtgccgaaa
tatcatcttaaggtttcagttacagatggagctcacagcacagtgtgtaatgttgtcatc
aacatcattgacctcaataacgagatccccatctttgagaagaatgattatgggagatac
agtgttccagaattagctgaaatcggggacactctgctaactatcaaggctacggatgct
gatgacccagggacaggcagctcgaaggtggactaccacatcactgcaggtgatccggac
aacgtattcgccatcgaagttgatgatgccactggagagggcagaatctacatagcacgg
ccgttggattatgagactcagtccacctataatcttcagattgatgctcgtaatcctgag
ccactaatcgagggggtgaactacgacgatcgttccaccgcggtcgttgccattgagctg
gtcgatgtcgatgagcctccagtgttcaccctagatattatgaatgtcaacattccagaa
aacgtcactgtaggaaccaccatcttgacagccgatgctaaagacccagagggacacaaa
atcatgtttaaactggagggagatgagcatggctggctggacttaaatgctgaaactgga
gagttgaaaaccaaagcaacgatggacagagaagtggtggatcaactcactgtccgaatc
atcgcatatgagtcagagggtcagatgcagcaaactgagagggaagtgtccatccagctg
atggatgtaaatgataactatcctaagctacagcgctctcgaggattcatatgtgtgaag
aagccagagcccttgatcttaactgctgtggatggagatgctgaaccatttggagaaccc
tttaccttcactttgcaactgaccaaccgcaaatctcagaactgggcacttgtatctgta
aatggcacctcagctaagctcacgctgaagaagaagcccaccagtgaccagaccatcagc
attcctgtcaacatcaaggacaatgcagggatgggtattacacaaaagatcgacgttcga
gtatgcaactgtactcagatgggttactgttttattgcgccagagagtcctgcttggaag
tttagcctgtccactacagtgggcattctaggaggagttttgggatttatcgttttgctc
ctgggtttttttatatgccgcacgaagaagaaagggaaaaaggaaacaacgacggctgat
ggggaaaccaacgccatgctctag
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