Neoarius graeffei (lesser salmon catfish): 132868004
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Entry
132868004 CDS
T10798
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132868004 (col28a1b)
Peptidases and inhibitors [BR:
ngra01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
132868004 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
132868004
NCBI-ProteinID:
XP_060756964
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Position
19:complement(62329571..62372663)
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AA seq
1151 aa
AA seq
DB search
MKVKLWSVTLLCFALLSLSHDARSQYRRNQTKNLTTKDGKVLVCALELAFLLDSSESAMS
YRFEKEKDFVRSFGARVVKMQVPDWHLIPRLAVLQYSSSVSIVQSFSNWNGLDNFLASVG
SMAYIGQGTYSSYAIGNATELFIRETDDKNVRVMLLMTDGSDHPRSPNILAATTEAKGHN
IKLFTISLSSQGSQNSAKLRAMASSPVQQFVHNLNDPDLEERLLQELKKVANNECPRVQA
CVCEKGDRGAPGHPGKKGDPGIEGLPGPRGEKGHTGPAGPPGLDGPEGRPGYKGAKGDRG
ECGAPGSKGNKGAEGPRGLRGVRGERGPQGPPGDEGPEGQQGPKGDRGYPGAAGPRGDIG
IGFPGLKGDKGNQGRPGPVGPVGTGEPGQIGPPGLRGLQGVPGFPGEGIIGPKGDRGYNG
SIGARGPPGFGFKGEKGNPGPPGPPGSIGAPGLGIQGEKGTQGPIGPPGPRGIPGISIAG
EKGDRGLPGERGPPGQKGVGEPGAKGEPGFQGLPGEPGAPGEEGARGPKGETGVPGPRGL
EGPPGKGLPGEKGEQGERGPRGQPGVMGPVGKVGSKGEPGGLGPPGIIGPPGRGIPGSKG
DPGPPGPPGLVGETGIGIPGPKGERGLPGPLGPPGLKGDGYPGPPGPPGSQGQPGEPGPA
GTGFPGPKGDQGSAGPPGPVGPPGIGRLGPKGSIGQTGSPGPPGLPGEGIQGPKGELGFQ
GIVGPRGAPGEGLPGQKGDRGFSGERGRKGDKGGQGEPGQTGPVGRPGQKGEPGLTREEV
VKLIKSICGCGVTCRFNPLDLVFVIDSSESVGPENFDIIKDFVNTLIDRVSVRPNVTHVG
IVLYSHMTEVIADLSRSLSRDEVKSAVRRMPYMGEGTYTGSAIHKANQLFLSGRPGVRKM
AVVITDGQVDQRDLVKLEDAVQDVHSSNVEMFVIGVVNQSEPFYESFKRELESIASDPDE
EHIYLISDFRTLTALESKLLVKLCENNHDFLFSQTPSPDLVPVTPRLPFYDEELWRGTYT
FKTDHTQPGALEGILDSTRAPFISGENQNSQNDLWPIRYSSDPGKPLERLEPHMTSTTTT
TKPHLILIQDEFSKDDACMQPLDPGPCRTYVVKWYYEPKANSCAQFWFGGCHGNGNRFDT
ESICRKSCVIN
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaagctgtggagtgtgacgctgctgtgctttgcattattatccctttcacac
gatgcccgaagtcagtacagaagaaaccaaacgaaaaacctgaccacgaaagatggaaag
gtgctggtgtgtgcgctggagttggccttcctcctggacagttcagagagtgccatgtca
taccgttttgagaaagagaaggattttgtgcgttcatttggtgccagggtggtgaagatg
caggttcctgactggcacctgataccccgccttgctgttctccagtacagtagctctgtg
tccattgtccagagcttctccaactggaatggactggataacttcctggccagtgtgggc
tccatggcctacatcggacagggcacatactcatcctatgccatcggaaacgccactgaa
ctcttcatccgtgagactgatgacaagaacgtcagggtgatgctgctgatgactgatggc
tccgatcatccacggagtcccaacatcctggctgccaccaccgaggccaaaggacacaac
atcaaacttttcaccatcagcttgtcatcacagggcagccaaaacagcgccaagctgcga
gccatggctagcagtccggtgcagcagttcgtgcacaacctcaacgatccagacctcgaa
gaaagactacttcaggagcttaaaaaagtggccaataatgaatgtccacgagtgcaagcg
tgtgtgtgtgagaaaggagacagaggcgctccgggacaccctgggaaaaaaggagatcca
gggattgaaggactgccgggaccgagaggggaaaagggacacactggacctgcaggaccc
ccgggactggatgggcctgagggacgacccgggtacaaaggtgctaagggcgacagagga
gaatgtggagctcctggatcaaaaggaaataagggtgctgaaggaccgagaggactgaga
ggagtcagaggagagcggggccctcaagggccaccaggggatgaaggacctgaaggacag
caaggccccaaaggagatcgtggatatcctggtgcagctggacctcgaggggatatcggt
attggatttcctggtcttaagggggacaagggaaaccagggaagaccaggtcctgtaggt
cctgttggaacaggtgaaccaggccaaattggaccaccaggacttcgagggcttcaaggg
gttcctggcttcccaggagaggggataatagggccaaagggggatcgaggttacaacggt
tccattggagcacgcggaccaccaggttttggcttcaagggcgaaaagggtaatcctggg
cctcctgggcctcctggttccataggggcccctggattgggaattcaaggagaaaaggga
acccagggtccaataggtcctccaggtcccagagggatcccagggataagcatcgctggt
gaaaagggagaccgtggcctaccaggagaacgtggaccaccaggacagaaaggtgtcgga
gagccaggagctaagggggagcctggctttcaaggtcttccaggagagccaggtgctcca
ggagaagaaggagcaagaggaccaaagggtgaaacaggtgttcctgggcctagaggacta
gagggaccacctggtaaaggtctacctggagaaaagggagagcaaggagagagaggacca
agaggacaaccaggagtcatgggaccagtgggcaaagtggggtccaagggagaaccagga
ggtttggggcctcctgggataattggacctccaggaaggggaataccaggcagtaagggg
gatcctggaccaccgggacctccaggacttgttggagaaacaggaatagggatccctggg
ccaaagggtgaacgaggactacctggacctttaggaccaccaggactgaagggagatggc
tatcctggaccgcctggtcctccaggcagccaaggacaacctggagagcccggtccagca
gggacaggatttccaggaccaaagggggatcaaggttctgcaggtcctccagggccagtg
ggcccaccaggaattggacgtttaggcccgaagggttctataggtcagactggctcacct
ggcccacccgggctgccaggagagggaatccaaggcccaaagggtgagcttggattccaa
ggaatagtgggaccaagaggagccccaggagagggtttgcctgggcaaaagggggaccgt
gggttttctggagaacgaggacgcaaaggggacaaaggaggacaaggagaaccaggacaa
acagggccagtgggtagaccaggtcagaaaggagaacccggactaactagagaagaagtt
gtcaaattaatcaaatccatttgtggctgtggtgtgacttgcagattcaaccccctggac
ctggtttttgtgatcgacagctcggagagcgtgggtcctgagaactttgacatcataaag
gactttgtgaacaccctgatcgaccgtgtttctgtcagacccaatgttacacatgttggg
attgtgctgtatagtcacatgactgaggtgatcgctgatctgtctcgatccctgagccgt
gatgaggtgaagtccgctgtacgtcgaatgccctacatgggggagggaacctacacagga
agtgccatccataaagctaatcagctgttcctttcgggccgacctggagttcggaaaatg
gcagtggtgattacagatggccaggtggaccaaagagacctggttaagctggaggatgca
gtgcaagatgtgcactccagcaacgtcgagatgttcgtcattggtgtggtgaatcagagt
gagccgttttatgagagcttcaagagagagctcgagtccatcgcctctgatccagatgag
gaacacatctatctgattagtgacttcaggacactcacagctctggagagtaagctgttg
gttaaactctgtgagaacaatcacgacttcttgttcagtcaaacgcccagccctgatctc
gtccctgtaacccccagactcccattttatgatgaggaactatggagggggacatacacc
tttaaaacagaccacacacagccaggagcattagaagggatcttagacagcaccagagct
ccgttcatcagtggtgagaaccagaacagtcagaatgatctgtggcctatcagatacagt
tctgatccaggaaaacccttagagagactggaaccccacatgaccagcaccaccaccacc
accaagccacacctgatactgattcaggatgaatttagcaaagacgatgcctgcatgcag
ccactcgaccccggaccatgtcgcacgtacgtggtgaaatggtattacgaacccaaggcc
aactcctgtgctcagttctggtttggaggttgccacggcaacggtaatcggttcgacaca
gagagcatctgccggaaatcctgtgtcataaactaa
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