Neoarius graeffei (lesser salmon catfish): 132868236
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Entry
132868236 CDS
T10798
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132868236 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132868236 (gtf2f1)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
132868236 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
132868236
NCBI-ProteinID:
XP_060757041
LinkDB
All DBs
Position
20:complement(203049..214971)
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AA seq
535 aa
AA seq
DB search
MTSLVNSGSSTEYTVRVPKNTSKRYSIMAFNAGDKVNCSAWTQARMERDLSNRRMYGEEE
TPEGAAGSEFGKKQREEARRKKFGIVTREFKAEDQPWILKVNGKAGRRFKGQKKGGVTEN
ASYYIFTQCADGAFEAFPVHAWYNFTPVAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQRR
LKEQENGDDEEEEGEKGAKKKKNKKKKGGLGGDLRIHDLDDDLELSSDHSESSAGEDGEG
RSKSKKENSSKAKGKKKKKKKGSDVEGHEDSDDGDFEGLEVDYMSDESSSEEEEPEKVKP
NKGEDIPKGIDEASESEEESEEEHKNEDEAKEEEEEEDGKKTPVQVEKKKKKDSSGESDS
TEDSDIEGETASALFMAKKRTPPKRGARGSAGSSRAGSRPGTPSIDHAATSNTLRAAATK
LEQGKRQAAMSSSETPAAKRLKMEPTSQSPSGKSTPQPASGKSTPSSSDVQLTEEAVRRY
LIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKKLNPERKNINDKMHFYLTE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggtgaacagcggctcctccaccgagtacactgtccgagtcccgaagaac
acgagtaagaggtacagcatcatggcttttaatgccggagacaaagtgaactgttctgca
tggactcaggctcggatggagcgggatctgagtaatcggaggatgtacggtgaggaggaa
acgcctgagggagctgccggcagcgagtttggtaaaaaacagagggaggaggcacgcagg
aagaaatttgggattgtaacccgcgagtttaaggcagaggaccagccgtggatcctcaaa
gtgaacgggaaagcagggagaaggtttaaggggcagaagaaaggaggcgtgacggagaac
gcgtcatactacatcttcacacagtgtgctgatggagcgttcgaggcctttcctgttcac
gcctggtacaacttcaccccggttgctaaacaccgcacgctcactgctgaggaggctgag
gaagagtggggcaggaggaataaagtggtgaatcacttcagcatcatgctgcaacggcga
ctgaaggagcaggaaaatggtgatgatgaggaggaggagggggaaaagggagcaaagaag
aagaagaataagaagaaaaaaggaggccttggaggagacctgcgtattcatgatctcgat
gatgatctggagttgagcagtgaccacagtgaaagcagtgcaggagaagacggagaaggt
cggtcgaagagtaagaaggagaacagctcaaaggccaaggggaagaagaagaagaagaag
aagggcagcgatgtagagggacatgaggacagtgatgatggagactttgaaggcctggaa
gtggactacatgtctgacgagagcagttccgaggaagaggagccagagaaagtgaagccc
aataaaggagaggacatacctaaaggaatcgatgaagcgtcagagagtgaggaagagagc
gaggaggagcacaagaacgaggatgaggccaaagaggaggaggaggaggaagatggcaaa
aagacacctgtacaggtggagaagaagaagaagaaagacagcagtggcgagtcggacagt
actgaggacagtgacattgagggagagacggcgtctgcgctcttcatggcgaagaagcga
actcctcctaaacgaggcgcccgaggttctgctggaagttctagagcaggaagtcgtccc
ggaacaccttccatcgaccatgccgcaacttccaacacactgcgtgctgctgctaccaaa
ctggagcagggtaagcgtcaggcggcgatgtccagctcagaaactcccgctgccaagagg
ctgaagatggagccgacttctcagagcccatcaggaaagagcacgccacaaccggcgtct
gggaagtccacgccaagctccagtgacgtgcagctgacggaggaggccgtacgccgttat
ctgatccggaagcccatgaccacaaaagatctgctgaagaagttccagaccaaacgcaca
ggactgagcagcgagcagacggtcaacgtccttgcacagatcctcaagaaactcaacccc
gagaggaaaaacatcaacgacaagatgcacttctacctcactgagtaa
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