Neoarius graeffei (lesser salmon catfish): 132868288
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Entry
132868288 CDS
T10798
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03020
RNA polymerase
ngra03420
Nucleotide excision repair
Brite
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132868288 (polr2b)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132868288 (polr2b)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132868288 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132868288
NCBI-ProteinID:
XP_060757130
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Position
20:4487376..4510129
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AA seq
1174 aa
AA seq
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MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTTGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQQQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSIIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPKREECQGM
RHAIYEKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRLPYACKLLFQELMSMSIAPRMMTT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaagatgaagatatccagtatgatgaggatgatgatgagatcactcctgat
ctgtggcaggaagcctgttggattgttatcagttcctactttgatgagaaaggtttggtg
cgccaacagctggactctttcgacgagttcattcagatgtccgtccagaggattgtggag
gacgcgccacccatcgacctgcaagctgaggcccagcacacgaccggagaggtggaggaa
ccgcctcggtacctgctgaagttcgagcagatctatctgtccaagccgacgcactgggag
cgagacggcgctccgtcaccaatgatgcccaacgaagcacgactccgaaacctcacgtac
tcggctcctttgtacgtcgacatcaccaagaccatcataaaggagggagaggagcagcag
cagacgcagcaccagaaaaccttcatcggcaaaattcccatcatgctccgctccacctac
tgcctgctgagcggcctgacggatcgtgacctgtgtgagctcaacgagtgtcctctcgac
ccgggcggctacttcatcatcaacggctccgagaaggtgctgattgctcaggagaaaatg
gccacgaatacagtatacgtgttcgccaagaaggattcgaagtacgcatacacagccgag
tgcaggtcctgtctggagaactcctccagacccaccagcaccatctgggtcagcatgatg
gccagaggaggacagggagtgaagaagagcgcgatcgggcagaggatcgtctccaccttg
ccatacatcagacaggaagttcccatcatcattgtattccgagcgctgggcttcgtctcc
gacagagacatcctggagcacatcatctacgacttcgatgatcccgagatgatggaaatg
gtgaagccatctctggacgaggcattcgtgatccaggagcagaacgtggctctgaacttc
atcggctccagaggagccaaacccggagtcacgaaagagaggaggataaaatacgccaaa
gaggttttgcagaaagaggtgctgcctcacgtcggcgtgtctgacttctgcgagaccaag
aaggcgtactttttaggttatatggtgcacaggctcctgctggcggctctgggcagaaga
gagctggacgaccgagatcattacggaaacaagaggctggatctggccgggccgctcctg
gcgttcctcttccgaggaatgttcaagaacctgctgaaggagatcaggatctatgctcag
aagttcatcgaccgaggcaaagacttcaacctggagctggccatcaaaacgcgcatcatc
tcagacggcctcaagtactcgctggccacggggaactggggtgatgtcaaaaaagcccat
caggctcgagctggagtgtctcaggtgttgaacagactgacgttcgcctcgacgctttct
caccttcgccgcgtgaactcgcccatcggccgagacggcaagctggcaaagccgaggcag
ctccataacaccctgtgggggatggtgtgtcctgccgaaacgcccgagggccatgctgta
ggtctggtgaagaacttggcgctgatggcgtacatctccgtgggttctcagccgtccccc
atcctggagttcttggaagagtggagcatggagaacctggaggagatctcacctgctgcg
attgcagacgcgacaaagatctttgtgaacggctgctgggtgggaatccacaaagacccc
gagcagctgatgaacactctgaggaagctcaggaggcagatggacatcattgtgtctgag
gtgtcgatgatccgcgatatccgagagcgagagatccggatttacacggacgccgggcgg
atctgtcggccgctgctcatcgtggagaagcagaagctcttgctgaagagacgccacatc
gatcagctcaaagagcgagagtacaataactacagctggcaggacctggtggcgagcggt
gtagtggagtacatcgatactctggaggaggagacggtgatgttggcgatgaccccagat
gacctccaggagaagggcgtggcctactgttccacctacacacactgtgagatccatccg
tccatgatcctgggagtgtgtgcctccatcattcctttccctgatcacaatcagtctccc
aggaacacgtaccagtctgctatggggaagcaggctatgggtgtgtacatcaccaacttc
cacgtgcggatggacactctggctcatgtgctgtattacccacagaagcctctggtcacg
acgcgctccatggagtacctgcgcttcagagagctgccagcaggtatcaattctatcgtg
gccattgcatcctacacgggctacaatcaggaggactccatcatcatgaaccgttctgca
gtggaccgaggcttcttcaggtccgtgttctatcgctcctataaagagcaggagtcaaag
aaaggcttcgaccaggaggagatttttgagaaacctaaacgtgaagagtgtcagggaatg
cgtcatgccatctacgagaagctggacgacgacggcctgattgcgcctggcgtgcgcgtg
tccggcgaggacgtgattatcggaaagacggtcactctaccggaaaacgacgacgagctc
gaaagcacgaaccggcgctacacgaagagagactgcagcacgttcctgcgcaccagcgaa
actggcatcgtcgaccaggtcatggtcacgctcaaccaggagggatacaagttctgcaag
atccgggtgcgctcggttcgaatccctcagatcggagacaagttcgccagtcgacacgga
cagaagggaacctgtgggattcagtacaggcaggaggacatgccgttcacatgtgaagga
attacgccagacatcatcatcaacccccacgctatcccttccagaatgacagtcggtcac
ttgatcgagtgtctccaagggaaggtttctgcgaataaaggggagatcggtgacgccacg
ccgttcaacgatgccgtgaacgtgcagaaagtgtccaacctgctgtctgaatacggttac
cacctcagaggaaacgaggtgctctataacggcttcacaggtcgtaagctgacctctcag
atcttcctcggccccacttactaccagcgcctcaaacacatggtggacgataagatccac
tcgagggcacgaggtcccgtccagatcctcaacaggcagccgatggagggcagatcgcga
gacggaggtctgcgtttcggagagatggagcgagattgtcagatcgctcacggtgcagct
cagttcctcagggagcggctgttcgaggcgtccgatccctaccaggtgcacgtgtgtaac
ctgtgcggtctcatggccatcgccaacacgcgcacgcacacgtacgagtgcaggggctgc
cgcaacaagactcagatctcgctggtgcggctgccgtacgcctgcaagcttctcttccag
gagctcatgtcgatgagcatcgccccacgcatgatgaccacctga
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integrated database retrieval system
