Neoarius graeffei (lesser salmon catfish): 132868624
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Entry
132868624 CDS
T10798
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132868624 (smarca4a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132868624 (smarca4a)
Chromatin remodeling factors
BAF complex
132868624 (smarca4a)
PBAF complex
132868624 (smarca4a)
GBAF(ncBAF) complex
132868624 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132868624
NCBI-ProteinID:
XP_060757641
LinkDB
All DBs
Position
20:38253850..38321765
Genome browser
AA seq
1628 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMMGPSPGPPPTGHNLPPQG
PSGYTQENMHQMHKPMEGMHEKGMPDDPRYGQMKGMGMRQGAHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPSNGPPSGPMMPSGPGGVPMEGGDPQAMSQQNRGGGAAPGPGTGPN
GGPAGPSGPGSTGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQ
PGMPNMPPASGPGAGPPGPGGPVPAGPNYNRPHGMVGPNMPPPGPSGVPPGMQGQPPNGP
PKSWPEGPMVNAAAPASAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPP
PMMLHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQDLENLPGSLAGDLRTKAT
IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQK
IEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKLQKLTKAVATYHANTEREQKKENER
IEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKK
KKKKKKKADISEVGASALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVDAPKANQLEA
WLEMNPGYEVAPRSDSEDSGSEEEEEDEEEQPQPSLPAEEKKKIPDPDSEDVSEVDALHI
IEHARQDVDDEYGHAQFAVGLQSYYTVAHAVTEKVERQSSLLVNGTLKQYQIKGLEWLVS
LFNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAP
SVVKVSYKGSPAARRSFVPILRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMK
NHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPF
AMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVL
YRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTG
GIVQGPDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLD
GTTKAEDRGMLLKNFNDPAYQYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQ
DRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFL
QAILEHEEQDEEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRKPRLMEE
DELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEI
EEEVRHKKTTRKRKRDRDLDLPSTATPSSSGRGRDKDDDSKKQKKRGRPPAEKLSPNPPS
LTKKMKKIVDAVVKYKDNSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRIHK
YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEDSDGEESEEE
EEEVDEGSESESRSVKVKIKLSRKEKALERGKGRRRTGRGSRPKPVVSDDDSEEEQEEEH
SASGSEED
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccggacccccccatgggagggacccctcggcccggcccttctccaggcccc
ggtccgtctccaggagccatgttgggtccaagcccaggaccttcacctggttctgctcat
ggtatgatgggtcccagcccaggaccaccacctacaggacataacctacctccacagggg
ccctcaggatacacgcaggaaaatatgcatcaaatgcacaagcctatggagggcatgcat
gagaagggcatgccagatgaccctcgttatggccagatgaagggcatgggcatgagacag
ggtgcccacagtggtatgggaccaccacccagccctatggaccaacattctcaaggatat
ccctctcctcttggtggctctgaacatgctcccagtcctgtgccttctaatggccctcct
tctggcccgatgatgccctctggccctggtggtgtgcccatggagggcggtgaccctcag
gccatgagccagcaaaatcgaggtggaggtgctgcaccaggtccaggcacaggacctaat
ggtggacctgcaggtcctagtggcccaggcagcactggaggacccacaccattcaaccag
aaccagcttcaccagctccgtgcacagatcatggcatacaagatgctggcacgtgggcag
cctctgcctgaccacttgcagatggccgtgcaaggcaaacggccaatgccaggaatgcag
ccagggatgcccaatatgccccctgcttcaggacctggagctggccctcctgggcctgga
ggcccggtcccagccggccccaattacaacaggccacatggaatggtcggcccgaatatg
cctcctccaggaccatctggagttcccccaggtatgcagggacagccccccaatgggcca
cccaaatcatggcctgaagggcccatggtgaatgctgctgctccagccagtgctcctcag
aagttaatcccaccccagcctaccggtcgcccttctcccgccccaccctctgtgccccca
gctgcatcacccgtcatgccccctcagacccagtctccaggccaaccagcccagccacct
cccatgatgctccatccaaaacagaaccgcatcacacctatccagaaaccacgtggcctt
gatcctgtggaaattctacaggagagagagtacagactgcaagctcgtatcgcccatcgt
atccaagacctggagaatcttcctggctctctagcaggagaccttagaaccaaagccact
attgaactgaaggccctgagacttcttaactttcagagacagctgcggcaggaggtggta
gtgtgtatgcggcgtgacacagcgctagagacagcactcaatgccaaagcctacaaacgc
agcaagaggcagtcgctgcgtgaagctcgtatcaccgagaaactggagaagcagcagaag
atagaacaagagcgcaaacgtcgtcaaaagcaccaggaatatctcaacagtatcctccag
catgctaaagactttaaggagtaccatcgttccatcacaggaaagctccaaaagcttacc
aaagctgtggccacctaccatgccaacacggagcgtgagcagaaaaaagagaatgagcgc
attgagaaggagagaatgcggaggctgatggcggaagatgaggagggttacaggaagctg
atcgatcagaagaaagacaagcgtctggcctacctgctacagcagacagatgagtatgtg
gccaacctcacagagcttgtgcgtgcccataaggctgttcaggccctcaaggagaaaaag
aagaagaagaaaaagaagaaggctgacattagtgaggtcggagcttcagcactgggccca
gatggagagcctttggatgagaccagtcagatgagtgacctcccagtgaaggtcattcat
gtggacagtggcaagattctaactggtgtggatgcacccaaagcaaaccaactggaggcc
tggctggaaatgaaccctgggtatgaagtggcaccacgatctgatagtgaagacagtggc
tcagaggaagaagaggaagacgaagaagagcagccgcaaccatctcttccagcagaagag
aagaagaaaattccagatcctgacagtgaggatgtgtctgaggtggatgctcttcacatt
attgagcacgctaggcaggatgtggacgatgaatacggacatgctcagtttgctgtgggc
ctgcagtcttactacactgtggcacatgctgtgactgagaaagtggagagacagtcctct
cttctggttaatgggacactcaaacagtaccagattaagggtctggagtggcttgtgtct
ctgtttaataataatctaaatggcattcttgcggatgagatgggcttgggaaagactatc
cagaccatcgcactcattacctacctcatggagtacaagcgccttaatggacccttcctt
ataatcgtacccctctcgactctgtccaattgggtgtatgaatttgataaatgggctcca
tctgtggtcaaagtctcctataagggctctcctgctgctcgccggtcctttgttcccatt
ctacgcagtggcaagttcaatgtgcttcttactacctatgagtacatcatcaaagataaa
caagtgctggccaagatccgctggaagtacatgattgtagatgagggtcaccgtatgaag
aatcatcactgtaagctgactcaggttctaaacacacactacctggcgcccaggcgcctg
ctactcacaggcacacctctgcagaacaaactgcccgagctgtgggccctgcttaatttc
ctgctgcccacaatcttcaaaagctgcagcacctttgagcagtggttcaatgcacccttt
gccatgactggtgaaaaggttgacctcaatgaagaggagaccattctgatcattcggcgt
ctgcacaaagtgctccgccccttcctgctaaggaggctcaagaaagaagtagaagcccag
ctgcctgagaaggttgagtatgtgatcaagtgtgacatgtcagcactgcagagagtactg
tacagacacatgcaagctaagggtgtcctgcttactgatggctctgagaaagacaaaaag
ggtaaaggtggaactaagacactgatgaacacaatcatgcagctgcggaagatctgtaac
cacccatacatgtttcagcaaattgaggagtccttctctgagcacctgggctttaccgga
ggcatcgttcaagggccagacttgtatcgagcctctggaaagttcgagcttctggatcgc
attcttcccaagctgcgtgcaaccaaccacaaagttctgctcttctgtcagatgacttca
ctcatgaccatcatggaggactattttgcctaccgtaattttaaatacttgcgtctggat
ggaaccactaaggctgaggaccgtggcatgctgcttaagaactttaatgaccctgcctat
caatactttgtgttcctgctgagtaccagagctggtggcttggggctcaacctgcaatct
gctgacacggttatcatttttgatagtgactggaatcctcatcaggacttgcaagctcag
gatcgtgctcatcgcatcgggcagcagaacgaggtgcgcgttctgcgtctctgcaccgtc
aacagtgtggaagagaagatcctggccgctgccaagtacaaattaaacgtggaccagaag
gtgatccaggccggtatgttcgaccagaagtcctccagccatgagcgcagagccttctta
caggccatcctggagcatgaggaacaggatgaggaggaggatgaggtacctgatgatgag
actgtcaatcaaatgattgctaggagcgaggaggagtttgatcactttatgcgcatggat
ctagaccggcgccgtgaagaggcccggaaccccaagcgcaagcctcgtctgatggaggaa
gatgagctccccacctggattatgaaggatgatgcagaagtggaaagactcacctgtgag
gaagaagaggagaagatgtttggccgtggatcacggcagagaaaagaggtggactacagt
gactcgcttactgagaaacagtggctcaaggctatagaggagggcacactggaggagatt
gaagaggaagtgcggcataagaaaacgacccggaagaggaagcgagaccgtgacctagac
ctcccaagcacagccacacccagctccagcgggcgaggtagagataaggatgatgacagt
aagaaacaaaagaagcgtggccgtccccctgctgagaaactctctccaaacccaccatcc
ctcaccaaaaagatgaagaaaattgttgatgctgtcgtcaagtataaggacaacagtggc
aggcagctgagcgaggtctttatccagcttccctctcgcaaggagctgcccgagtattat
gagcttatccgcaaacctgtggacttccgcaagatcaaggaacgcataaggatccataag
taccgcagtctgaacgacttggagaaagacgtcatgctgctctgccagaacgctcagacc
ttcaacctggaggggtcgctgatctacgaggactccatcgtgctccagtctgtgttcaca
agcgtgcggcagaagatcgaaaaggaggaggacagcgacggagaggagagtgaggaggag
gaagaggaggtggatgaaggctcggagtctgaatcacgctctgtaaaggtgaagatcaag
ctgagccgtaaggagaaagctcttgagagagggaaaggcaggcggcgcactggacgaggc
tcacgacctaaaccggtagtaagcgatgatgacagtgaagaggagcaggaagaggagcac
tctgccagtggaagtgaggaagattaa
DBGET
integrated database retrieval system
