Neoarius graeffei (lesser salmon catfish): 132868669
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Entry
132868669 CDS
T10798
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
132868669 (helz)
3'-5' decay
Other 3'-5' decay factors
132868669 (helz)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132868669
NCBI-ProteinID:
XP_060757731
LinkDB
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Position
20:complement(42781935..42943791)
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AA seq
1880 aa
AA seq
DB search
MEDRRPQKSCEEAVGSLVRQEYVAAVDHSTEALLAIGSTPPTPKTTLLRKCALLYRIAAL
LQLKEYDQADEDCKHVLAEELGKGEGSFRAGLQKMMLDGSLQEVFTILSKALYGEPLNGI
MAKDMTRLKILLSEIEAVSSKIVTEQPGEPEEDVQEGWQFRPPPRGVTSSEEYTLCKRFL
EQGLCRYGAQCTSAHSQEELTEWQQRYASRLIRLKQQQDGKHYTENYTEALIEKWINSLT
PEKVLNDCVDGVTVEHNSDLSVTVNTKKSSHSWTFSLYCKPARMLHRIALLYDANRPHFS
IMAVSAGDTSTQVPQQVCEGGCQEWTGVGLLQNGMDHCLYTVEVAFRTEIFGTFRQTVVF
DFGSEPVLMQRVMVDAASIEDLEHLMQARQQLLMTAKRWDSSCKTIVEFIPNENMELERS
LLSRYQIPLSADQLFTQSVLDKTLTRENYQSRLHDLLYIEEIAQYKEVSKFNIKVNLQLV
SSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVLLLPVSRDRMCQG
QPASAKERVYEALIEEKTKDYIFLRICKDCCEELNLMPDRELQVELQFQLNRLPLCEMHY
ALDRLRDNSILFPDISLTPIIPWSPNRQWDEQLDPRLNAKQKEAILAITTPLSINLPPVL
IIGPYGTGKTFTLAQAVKHILKQPDTRVLICTHSNSAADLYIKDYLHPYVEAGNPHARPL
RVYFRNRWVKTVHPVVQQYCLISGAYLTFQMPTRQDIERHRVVVVTLSTSQYLCQLDLEP
GLFTHILLDEAAQAMECETIMPLALANKSTRIVLAGDHMQLSPFVYSEFARERNLHVSLL
DRLYEHYPSEYPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPPHKDFYPLTFFTA
RGEDVQEKNSTAYYNNAEVFEIVERVEEMRRKWPVAWGKLDEGSIGVVSPYADQVFRIRA
ELRKKRMPEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLVEDSTEDLDY
GFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFISICHDNGSLHGITFEQI
KAQLEALELKKTYVLNPLAPEFIPRALRAQQPQGPGKHQHSPPKVKGQLASHAEHFPPEG
FVQPSAAVLMGNPIQAFTPTGGGAPPSGKSPSPVQRIDPHTGASILYVPAVYGGNMVMPM
SLPLPWPGYQNRFAMDPRIMSHQAAMAAYNLNLRPAVSRASPVLYGLNQPSPLGIGQLPS
TDKDLLQEPTANGKVDINGKVEHSRLLTPERKAPELKDKLGEPEPGQNKSPETHVGLVFP
SNRLLRKDPPAQRPPLNFPLPPPHPAFAPHAPPGPLAHYGLPRPPLRVQTHQPQPSAFPP
SFFSSHPLAQRTLHSPGLDVLDGGENLMGNVPDELKNVVRGVPPQHQPHQQPMRLNSFGE
ESLDSLLGDSLDGQNCSGMETLAPQPQQQQPVRLGQWNEHGPFLQGAVPPFTLAQQLAHL
AQPGMRIPQQLLRANWGLGTTAEDEPRVPMPRYPGLPRESLPQESYEPREAAEMPPPQSR
LLQYRQVQQPHIPRELPSPSTASSALPSSTSSSTNNHNHTPAPGPFPYPEASREPFHQQQ
AFSQTALPIPPEHVPIKYLLPEAHWHHAGTQQSTTLAFGLQQGPFTQLQLQQHKQQQQQL
QAPHNALHSLEEYEPRGPGRPLYQRRISSSSPQPYGESVVQCKESQDPTACFTYAPADLW
PSPGPAPLHNIPCNGASHLVPQRDILVSKAVNAAEEHVQAECVQQPPHSTGLAALQQHGQ
FPTLLPSKQTPPDPGGVGSMPVPGHNKPPAMSYASALRAPPKPRCPLPEQTKKNSDPISL
LQDLSIGSSNSSNGYYSYFK
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggaggccccagaagtcatgtgaagaggccgttggatcgttagtgaggcag
gagtatgtggcagcggtggaccacagcacggaggccctgctggccattggatcgacccca
cccacccccaaaacaaccctcctccgcaagtgtgcgctcctctaccgcatagcagccctg
cttcagctgaaggagtatgatcaagctgatgaagactgtaagcatgtgctggctgaggag
ctgggtaagggtgagggaagtttcagggctgggctgcagaaaatgatgctcgatggaagc
ctacaggaagtctttaccattctgtctaaagctctgtatggagaaccgctgaatggaatc
atggctaaggatatgacgagattgaagatactcctgtctgaaattgaggctgtaagcagt
aaaattgtgaccgagcagccaggagagccagaggaggatgttcaagaaggttggcagttt
cggcctcctcctcgaggggtcactagcagcgaggagtacacattgtgtaaaaggtttcta
gagcagggtctgtgtcggtatggtgcacagtgcacctcagcccactctcaggaggagctg
accgagtggcagcagcgctatgcttccaggctcatccgcctcaagcagcagcaagatggg
aagcattacactgagaactacacggaggccctcattgagaagtggatcaactcccttacg
ccagagaaagtgcttaatgactgtgtagatggagttacagtggaacataactcagatctt
tcagtcactgtcaacaccaagaaatcatcccattcctggacattctcactttactgcaag
cctgcccgcatgttgcaccgcatcgcactgctctatgatgccaaccgaccgcacttctcc
atcatggccgtgtcggcaggtgacacctctacccaagtaccccagcaggtgtgtgagggt
ggctgtcaggaatggactggagtaggactgctgcagaatggcatggatcactgcctctac
actgtggaggtggcgtttagaaccgagatcttcggcactttccgtcaaaccgtagtcttt
gatttcggctctgagcctgtgctgatgcagagagtgatggtggacgcagcatcgattgaa
gacctggagcatttgatgcaggcacgacagcagctcctgatgacggcgaagcgctgggac
tcctcttgcaagaccattgtggagttcattcccaatgagaacatggaactggagcgaagt
ctgctcagccgctatcagatcccactgtccgctgaccagctcttcacccagtccgtgttg
gacaagactctcacacgtgagaactaccagtcccgcctgcatgacctgctctacattgag
gaaattgcgcagtacaaagaagttagcaagttcaacatcaaggtaaatctgcagctggtc
tccagcttcatgttgacgggaatatctggaggtgctaagtacgcccaaaacggccagctg
ttcgctcgcttcaagctaaccgagacgctgtctgaggacacactggcaggacggctggtg
atgacgaaggtgaactccgtactgctgttgcccgtgagccgggatcggatgtgtcaaggc
cagcctgccagtgccaaggagcgcgtctatgaggccttgatagaggaaaagaccaaggac
tacatcttcctgcgcatctgcaaggactgctgtgaggagctcaatctgatgcctgacagg
gagctgcaggtggagctgcagtttcagctcaacaggcttccgctgtgtgaaatgcactat
gctctagaccgcctccgtgacaacagcatcctctttcctgacatcagcctaactcctata
atcccctggagccccaatagacagtgggacgagcagttggaccctcgtttaaacgccaaa
cagaaggaggccattttggctatcaccactccactgtccatcaatctccctcctgtgctc
atcattggaccctatggcacaggcaaaactttcacattggctcaggcagtgaaacacatc
ctcaaacagcctgatacacgggtcctcatctgcacccattcaaacagcgcagcagatctg
tacataaaggactatcttcatccatatgtggaggcaggcaatccacacgcaagaccactc
agggtttactttaggaaccgctgggtaaaaacggtgcacccagtggtgcagcagtattgc
ctgatctccggagcttacctcaccttccagatgcccactcggcaggacatagagcgtcac
cgtgttgtggtagtgactctcagtacctcccagtacctctgccagcttgatctggaacct
gggctcttcacacacatattgttggatgaggcagcccaggcaatggagtgtgagaccatt
atgccattggcactggctaataagagcacccgcatcgttcttgctggagaccatatgcag
ctcagcccctttgtgtacagtgagtttgcgcgggaaaggaacctacatgtgtccctgctg
gaccggctgtacgagcactacccctcggagtacccttgcaggatcctgctgtgtgaaaac
taccgctcccatgaggcaatcatcaactacacatcggagctattttacgagggcaagctg
atggccagcggcaagcagcccccacataaggacttctaccctctgaccttcttcacggct
cgcggggaggacgtgcaggagaagaacagcacggcttactacaacaatgctgaggtattt
gagattgtcgagcgtgtggaggaaatgagaagaaagtggccggtagcgtggggaaagctg
gatgaaggcagcatcggtgtggtgtccccctacgcagaccaggtgtttcgcatccgagct
gaactccgcaaaaaacgcatgccggaggtcagcgtggagcgagtgctcaacgtgcagggt
aagcagttccgtgtgctgttcctgagcaccgttcgcactcgtcacacctgcaagcacaag
cagacagccatcaagaggaaggaacagctggtggaagactccacggaggatctggactac
ggctttctctccaactacaaactcctgaacactgccatcacacgggcccagtctttagtg
gctgtggtgggagaccccatagcgctctgctccgtgggccgctgcagaaagttctgggaa
acgttcatctccatctgtcatgataacggcagtctgcacggaatcacatttgagcagatc
aaggcccagctggaggctctcgagctgaagaagacctacgtgttgaacccactggctccc
gagttcatcccccgagccttgagagcacagcagccccagggacccggcaaacaccagcat
tccccaccgaaggtgaaaggacagctcgccagtcatgcggaacactttcctcctgaaggg
tttgttcagcccagtgctgctgtattaatgggcaatcccatccaggctttcactccaacg
ggaggaggagcaccaccctctggcaaatcccccagccctgtacagcgcattgatcctcac
actggagccagcatcctctatgtgcctgctgtctatgggggcaacatggtcatgcctatg
tctctgccattgccatggccaggctatcagaaccgctttgccatggaccctcgcatcatg
agtcaccaggcagccatggcagcttataacctgaatctgcggcctgccgtcagtcgcgca
tcaccggtgctttatggtctgaaccagccatccccgctaggcattggccaactgccatcc
actgataaggacctgctgcaggaacctactgccaatggaaaggttgacattaatggaaaa
gtggaacatagcaggctgctgacacctgaaaggaaagctcctgagctcaaggacaaactg
ggagagcctgagccaggtcagaacaaaagccctgaaacccacgttggcctggtgtttcct
tccaaccgtcttctgcgtaaagatccacctgctcagcgtccgccactcaacttcccttta
ccccctcctcacccagcattcgccccccatgcccctcctggtcccctggcacactatggc
cttcccagacctccccttcgtgtgcagactcatcagccgcagccttctgccttcccgccc
tcatttttcagtagccaccctctggcccagcgcaccctgcactctcctgggctggacgtc
cttgatggaggggagaacctgatgggcaatgtgcctgacgaactgaagaacgttgtgaga
ggagtacctccccagcaccagccccatcagcagccaatgcgcctcaacagcttcggggag
gagagcctcgactcgctgcttggtgactctctggatggacagaactgttctggcatggag
acgctggctcctcaaccgcagcagcagcagccagtgcgtctaggtcagtggaacgagcac
gggcccttcctgcaaggtgctgtacctcctttcaccctcgcccagcagttggcacacttg
gctcagccaggcatgcggatcccccagcagctgctccgtgccaactggggcctgggcacc
actgctgaagacgagccccgagtacccatgcccaggtatcctggtctcccacgtgagtca
ctccctcaggagtcatatgagccacgtgaagctgctgagatgccccctcctcagtcacgc
ctgctacagtaccggcaggtgcagcagccccacattcccagagagctgccctcaccttcc
actgcctcctctgccctcccttcttccacctccagcagtacaaacaaccacaaccatact
ccagccccggggcctttcccttacccagaggccagccgtgagccttttcaccagcaacag
gcattcagccagactgccctccctataccccctgagcacgtgcccatcaagtaccttctt
cctgaggctcactggcatcatgctgggacacagcagtccacgactctggcatttggcctg
cagcagggccccttcacacagcttcagcttcaacagcacaaacagcagcaacagcagctc
caggccccacacaatgctctgcacagtctagaagagtatgaaccgcgagggcccggacgg
cccctgtaccagagacggatatcctccagctctcctcagccatacggggagagtgtggtg
cagtgtaaggagtctcaggatcccacagcctgtttcacatacgcccctgcagacctgtgg
cccagcccaggccccgctccactccacaacattccatgcaatggagcgagtcacctcgtc
cctcagagggatattttagtttctaaggcggtgaatgctgcagaggaacacgtccaggct
gagtgtgtgcagcagccgcctcactccactggccttgcagcacttcagcagcatggacag
tttccaaccctcctgcccagcaagcagacacccccagacccaggaggagtgggctccatg
ccagtccccggccacaacaagccccctgccatgtcctacgccagcgccctccgagctccc
cccaaaccccgctgcccgctgcctgagcagaccaaaaagaacagcgaccccatctctctg
ttacaagaccttagcatagggagttccaatagtagcaatggctattactcgtattttaag
taa
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