Neoarius graeffei (lesser salmon catfish): 132868678
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Entry
132868678 CDS
T10798
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132868678 (casc3)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132868678
NCBI-ProteinID:
XP_060757742
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Position
20:complement(44102965..44114780)
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AA seq
737 aa
AA seq
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MADRRRRRRRASQDSEDEDESASGSDSGRSASPSGKSRARVPEPGEPPAGRVGAKTDVES
ECESEDGVGEAVLSDYDSADPEENGSRSEGGEDEEEEGEHFSDEDAAQPVTEQKAAVDAP
AEGLGEGEEEEREMREMKEVKADEKGNLAGERQSGDGQESTDDPENKSANKAGQKLDDDE
DRKNPAYIPRKGLFFEHDVRGQAQDEERPKGRHRKLWKDEGRWEHDKFREEEQAPKSREE
LIAVYGYDIRNGNGPSDTRPFKPRKPRYPGPLNQESKRYRDGEKPPRSSWHGAPPSARSA
PPVTVTSQSVPAAPRPQNRPSTQPPARTFQSSRRPEIRSHLKATTRSQASENERAPRLRG
RGSHGPPHHAQRSLQEDEEEEGEIPTVATTYTAHYYKIEQETASSSQQKGECGTAEEQQS
STPSTVREVSPPPEKPVEKKSYSLARRSRARPSDLSKQASLEEAVPTPQVMPTAAKSESW
QGPGETGTQSGLSRLDQDLAHLSLAGQSWTQSPPSYLRPEMRGISSSIHMAGGPPQYGNM
EDMGVGGGRAKRYSSQRQRPVPEPAPMHIGLMEGHYYDPMSFQGPIYTHGDSPAAMPPQG
LLVQPEMHLPHPTHPGLHPHQSGGPIPNPALYAAPPVSLSPGQPPPQQLLPPPFYPPPGV
MTFSNTNYPYPAGATLPPMYPNAQAQSQVYGGVTYFDTVQQQAQPKPSPPRRTSQPVTVK
PPPPEDQSRKPSEEVRS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgacgacgaaggaggcgcgcgtctcaggatagcgaggatgaggatgag
tctgcgtccgggtcggacagcggaagatcggcttcccccagcgggaagagccgcgctcga
gtccccgaaccgggagagcctccagctgggcgcgtaggcgcgaaaaccgacgtcgaatcc
gagtgtgaaagtgaagatggtgtaggtgaagctgtcctttctgactatgacagtgctgat
ccggaggagaacggctcacgctcggagggaggagaggatgaggaggaggagggtgaacac
ttcagtgatgaagatgctgcacagccagttacagagcagaaagcagcagttgatgctccc
gctgaaggtttaggagagggggaggaggaggaaagagagatgagagaaatgaaagaagtg
aaagctgatgagaagggaaacttggctggagagaggcagagtggagatggtcaggagagc
acggatgatcctgagaataagtcggcaaataaagctggtcagaagttggatgatgatgag
gaccggaagaatccagcatacatcccccggaagggcctgttttttgagcatgatgtgaga
ggccaggctcaggatgaagagaggcctaagggcagacataggaagttgtggaaagatgag
ggtcgctgggagcatgataagttccgtgaagaggagcaggcccctaaatcacgtgaggag
ctgattgctgtttacggctacgacattcgtaatggcaacggccccagtgacaccagacca
ttcaaaccacggaagcccaggtatcctggcccactaaaccaagagtccaagcgttacagg
gatggtgagaagcccccccgctcctcctggcatggtgcacctcccagtgcccgcagtgcc
ccgcctgtgaccgtaacttcccagtcagttcctgctgctcctcgtccccagaataggccc
tccacccagccccctgcacgcaccttccagagcagccgtcggcctgaaatcagaagccac
cttaaagccaccacacgatcccaggcttctgagaacgagagggcacccagactccggggc
cgaggttctcatggaccccctcaccatgcccagcgcagcctacaagaggatgaagaagag
gaaggagagatccccactgtagccaccacttacactgcccattactacaaaattgagcag
gagacagcctcttcatcacagcaaaagggggagtgtggaacagcggaggagcagcagtcg
agcacacctagcacagtaagggaggtgtctccacctcctgagaagccagtggagaaaaaa
tcatactctctggcgcgtaggagccgagccagaccctcggaccttagcaagcaggcctcg
ctggaagaagcagtgcccaccccacaggttatgcccactgctgccaagagtgaatcatgg
cagggaccgggtgagacgggcacacagagtggcctgtcaaggcttgatcaggatctggcc
catctcagtctagcggggcaaagctggacccagagtccaccctcatacctccggcctgag
atgaggggcatctctagttctatacatatggctggtggacctcctcaatatggcaacatg
gaggacatgggtgttggtggtggccgggctaagcggtattcgtctcagaggcagaggccg
gtgcctgaaccagcgccaatgcacatagggctcatggagggccactattatgaccccatg
tcattccagggaccaatctatacacatggtgacagtcctgctgccatgccaccacagggg
ctgctggtacaaccagagatgcatctgccccaccccacacaccccggcttgcatccacac
cagtcaggaggaccgattccaaaccctgcgctttatgctgctccacccgtttctctgtct
cctggacaaccacccccgcagcaactgctacccccacccttctaccccccacctggagtc
atgacgtttagcaacaccaactacccttacccagctggagctaccctaccccccatgtac
cccaatgcacaggctcagtcacaggtgtatggtggagtgacgtattttgacacggtacag
cagcaggctcaacctaaaccttctccaccacgccgcacttcacagccagtcacagtaaag
cctcccccgccagaggaccagagcaggaagcctagtgaggaggtgcgctcctag
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