KEGG   Neoarius graeffei (lesser salmon catfish): 132868713
Entry
132868713         CDS       T10798                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngra03019]
    132868713 (atxn2l)
Messenger RNA biogenesis [BR:ngra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     132868713 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 132868713
NCBI-ProteinID: XP_060757798
LinkDB
Position
20:complement(46276803..46323594)
AA seq 1060 aa
MSFRRQNQQSGPSGRKTSNGPSGSAGMSPTVPGSNTTRPTPGRNRNSVKPPSQSPPVFEG
VYNNSRMLHFLTAVVGSRCDVRVKNGSVYEGIFKTLSSRCELAVDAVHKLRTEDGDGCGG
GTSAHPRREEITDTMIFSPSDLITMTCRDVDLNYATRDTFTDSAISSSRVNGDHREKVLQ
RWDGGDSNGENYDLDTDASNGWDASEMFRFNEETYGVKSTYDSSLSMYTVPLERGSSEGF
RQREARAARLASEIEASAQYRHRVALENDEGRSEEDKYSAVVRDGDRERGRDSPGFSSSG
SREGKYIPLPQRAREREIGASRGDRERGGPSSALPNRTNRPAPSSSSPRPPLPSGSGQPT
PPSDRNSPLSIRGGYSPHQAQCSPPAQSRPLEAGHASPPAPHMLPHSLSHPQSLSDSARP
VNGVSSRTSPKSQRPAQPRSLRTSNSHSSPTVSHSPKPDAPNQDSPLTAPSYLDTSSVTM
VTPKPSGPTPTFPVDVFSPFLCSVHLFSFFLFVQLFVSVNEILSKERTESPVSPQEGKGS
KAASLQQRSQIEELRKFGKEFRLHSSSSSSSPNTSATPSDPAQPSPTQSTQTDSTPSTEP
NTVSPTTPTQELPSDDAGRETSAEGPAAATPPSVTPTVTPSATPGGVSQPSGPDGQTAVP
PQPARTPGREDGRPEAADRAEGVADQVKKSTLNPNAKEFNPAKAPLTMVKPSATPTTPRP
TPPSPSVVLQPPAGQGAIYSPPYLSYVSTIPLQGHSVQAPQMYQYAVSTVSQGKYPRTKG
SVVAPRPDHNSSAPPMIQAAASAAGPPLVASPYPQSYLQYSQVIPAMPHYPGQPVYSMLQ
GGARMLSSGGHPQTLGPPGPQYPGQTEGPPGAQQGMYAPQSFSHHSGSMHPPQPSTTPTG
SQPPPQHPAPSPGQSGQSGPQPQTLYHSAPLSAPTPPNLPPGHSSPQASYPLQGYSLPGH
QPLPHPYSSIGQLTQAHVPGALSGPHHSGGHGPPPMMLLHAAPPPPQQGPGSGPGPQHPT
HAPPPPQQGTHQHYTYIGHPSAVQVQPHPSQQLPFHPPGN
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgtctttccgccgccagaatcaacagtctggaccaagtggccgcaaaacgtctaatgga
ccttctggatcggccggaatgtcaccgacagttcctgggagcaacactaccagaccaacc
cctggaaggaacagaaactctgtgaagcctccctcacagtctcctcctgtgtttgaggga
gtctacaataactcccggatgctccatttcctcacagctgtagtgggctctaggtgtgac
gtgcgggtgaagaatggcagtgtgtacgaggggatatttaagacactaagttcgagatgc
gagctggcggtggacgccgtgcacaaactaaggactgaagacggggatggttgtggaggc
ggtacgtccgcacaccccaggagagaggagatcacagacaccatgatctttagccccagt
gacttgatcaccatgacctgcagagacgtggatctcaactatgctacacgagacaccttt
acagactcggcgatcagctcatccagagtaaacggtgatcaccgagagaaggtgctgcag
aggtgggatggtggagacagcaacggagagaactacgatctagatacagatgcatctaat
ggttgggatgccagtgagatgttccgcttcaatgaagaaacctatggggtgaagtccacc
tacgactcaagcctctcaatgtacaccgttcccctagagcgaggtagctctgagggtttc
cgacagcgagaggcacgagctgcacgactggccagtgagattgaggccagcgcacagtac
cgccacagagtggcgctggagaacgatgaagggaggagcgaagaggacaagtacagcgcc
gtagtgcgggatggcgacagagagaggggtagagacagccccggcttctccagctctgga
agccgggagggcaaatacattcccttaccacaaagagcgagagagcgagaaattggtgca
tccagaggtgaccgagaaagaggcggaccctcctccgcacttcctaatcgaacaaacaga
cctgccccctcaagctcgtcccccaggccgcctctcccctctggtagtggtcagcccact
ccaccttctgataggaacagtccgttgtcaatcagaggtggatattctccccaccaagca
cagtgtagcccacctgctcaatcccggcccttagaggcgggccacgccagtcctcctgcc
ccacacatgcttccccattctctttcacaccctcagtctctctctgactctgcacgacct
gttaatggagtgtcctcgagaacatctcccaaatctcaaaggcctgcacaacccagaagc
ttgcgcacctccaactctcactcttcacctacagtctcgcattcccccaaacctgatgca
cccaaccaggactcccctctgactgctccttcctacctggacacctcttcagttaccatg
gtgaccccaaagccctccggccccaccccaaccttccctgtagatgttttctctccgttt
ctgtgttctgttcatttattttcattttttcttttcgttcaactttttgtgtcagtgaat
gagatcttatccaaggagaggacagagagccctgtcagtcctcaggaaggcaagggcagt
aaagctgcttcacttcagcaaaggtcacagatagaggaacttcgcaaatttgggaaggag
ttcagacttcactctagctcctcatcctccagtcccaatacttcagctacacccagtgat
cctgctcagccaagccctacccaaagcacacagacagactccaccccctccacagagccc
aacacggtatcccctacaactccaacacaggaacttccatcagatgacgcgggcagagaa
acgagtgctgagggtccagcagcagccaccccaccatctgtcacacccactgtcacacct
tctgccacacctggtggtgtttcccaaccctctggtccagatggacaaacggcagtgccg
ccccagcctgcaaggacaccaggcagggaggacggcagacctgaggctgcagacagagcg
gagggtgtagctgatcaagtgaagaagtccacactaaatcccaatgccaaagagttcaat
cctgccaaggcccctctcactatggtgaagccttctgcgacccccacgactccacgaccc
acgcctccaagtccctcagtggtgctccagcctcctgcaggacaaggagccatctacagc
cctccgtatctgagctacgtctcaacaatacccttacagggccactctgtgcaggcccct
caaatgtaccagtatgccgtgtctaccgtgagccagggaaagtaccccagaactaaaggt
tccgtggtcgctcctcgtccagaccacaactcttcggcacctcctatgatccaggcagca
gcgtcggcagcaggtcctccgctcgtggcttctccttatcctcaatcttacctgcagtat
agccaggtcatccctgccatgccacactatcctggacagccggtgtattccatgctgcaa
ggtggagcgcggatgctgagttcagggggacaccctcagactcttggccctcctggtcct
caatatcctggccaaactgagggacccccaggagcccagcagggcatgtatgccccccag
tcattctctcatcactcaggctccatgcatcctccgcagccgtccaccactcctactggc
agccagccgccccctcaacaccctgcccccagcccaggacagtctggacaatcaggtcca
cagccacagaccttgtatcattcagctcctctgtcagctcccactccccctaatctgccc
ccaggccacagctctccccaggcctcataccctctccagggctacagcctgccaggtcac
cagcccctaccccacccctactcatccattgggcagctcacacaggctcatgtcccagga
gcgctgtcgggtcctcaccactctgggggtcatgggcctcctccgatgatgctacttcat
gctgctcctcctccccctcagcagggtcccggttctggtcctggcccccagcaccccaca
catgcacctccaccaccccaacaaggaactcaccagcactacacctacattgggcacccg
tcagctgtgcaggtgcagccccacccttcccaacagctgcccttccaccctcctggaaac
tga

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