Neoarius graeffei (lesser salmon catfish): 132868795
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Entry
132868795 CDS
T10798
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
ngra04144
Endocytosis
ngra04145
Phagosome
ngra04148
Efferocytosis
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132868795 (rab5c)
04145 Phagosome
132868795 (rab5c)
04137 Mitophagy - animal
132868795 (rab5c)
04148 Efferocytosis
132868795 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132868795 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132868795 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132868795 (rab5c)
04031 GTP-binding proteins [BR:
ngra04031
]
132868795 (rab5c)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
132868795 (rab5c)
Endosome - Lysosome transport
132868795 (rab5c)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132868795 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
132868795 (rab5c)
Exosomal proteins of colorectal cancer cells
132868795 (rab5c)
Exosomal proteins of bladder cancer cells
132868795 (rab5c)
GTP-binding proteins [BR:
ngra04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
132868795 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
132868795
NCBI-ProteinID:
XP_060757966
LinkDB
All DBs
Position
20:53449413..53504569
Genome browser
AA seq
222 aa
AA seq
DB search
MAGRVGVTRTNGTTAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF
LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKE
LQRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI
AKKLPKNEPQGGAGPGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgagtaggagtgacgcggaccaacggcacgactgccgccgccgccaacaag
atctgccagttcaagctggtgctgctgggagagtcggccgtgggcaagtccagcctggta
ctgcgtttcgtcaagggccagttccacgagtaccaggagagcaccatcggagccgcattc
ctcacacagacagtctgcttggatgatacaacagtaaagtttgagatttgggacacagcc
gggcaagagagataccacagtttggctccaatgtactacagaggagcccaggctgccatt
gtagtctacgacatcactaacacagacactttcacccgagcaaagaactgggtaaaggag
ctccagagacaggccagccccaacatcgtcatcgctctggctgggaacaaagccgacctt
gctaacaagagagctgtggatttccaggaagcgcaggcgtacgcagacgacaacagcctg
ctgttcatggagacatccgctaagactgccatgaatgtcaacgagatcttcatggccatc
gcgaaaaagcttccgaagaacgagccacagggcggggcagggcctggggggcgggctcga
ggcggagttgacctgcaggaagcggcacctcagggcagatctggccagtgctgcggagga
ggaaactaa
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