Neoarius graeffei (lesser salmon catfish): 132868964
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Entry
132868964 CDS
T10798
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132868964 (rnf25)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132868964 (rnf25)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132868964 (rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
zf-RING_2
zf-RING_11
VPS18_RING_C
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
132868964
NCBI-ProteinID:
XP_060758294
LinkDB
All DBs
Position
20:complement(66493391..66501669)
Genome browser
AA seq
504 aa
AA seq
DB search
MAAESDVLCEIEVLQSIYLDQLTVTRNDDDGGWRVSVILHPSTGEDCLAQFVRLTLTLDL
DSEYPASPPYISIYHPRGLSDDKLLSLQRSLHSEAEECVGTPVLYQLIEKAKEILTESNV
PHGNCVICLYGFKVDEVFTKTSCYHYFHSHCLGRYITHSEEELQERVRELEEDKTRDGGE
DEELCVVCPVCREPLMYDVKALLSSPVPNFPPQEDEAVTAEFKRKWAELQKILDHQREKG
GVIDPEAESNRFLIHINHAPNDSSDPACTDVPDPDSAQPLPPPPPLPPECSNESPRAPRA
ENTSCLSHRRAPHTPRAPYGRKQHVEFRGGRRDRGKGGGGRGGHAARVVPLPVLENTLAK
LSVSAAESSRNGGALQATSEHRDRHLVEVKEQPRRALGDKSVETSHQETPESKHEQDVTS
DGAQTGARERGTREERAGGRRHGPRGPLYSHWHERNPQWDNSGNVHHYRHHHRGARAPRA
GHHRGNGKSLYQRTESELRKEGVL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagagcgatgtcctgtgtgagattgaggttctgcagtccatctatctggat
cagctgaccgtcacccggaatgatgatgatggaggatggagagtcagtgtgatcctccac
ccctccactggagaagactgtctggcgcagtttgtccggctcacgctcacactggacctg
gattcagagtacccggcatctcctccctacatctccatctaccatccccgaggtctctcc
gatgacaagctgctcagtttacagcgcagtctacactcggaggctgaggagtgtgtgggg
acgccagtgctgtatcagctcattgagaaagccaaagagatcctgactgagagcaacgtt
cctcatggcaactgtgtgatctgtctgtacggctttaaggtggacgaggtgttcacaaag
acgagctgttatcattatttccactcccactgtctgggccgctacatcacgcattctgag
gaggagctgcaggagcgagtgagggagctggaggaggataagaccagagacggaggggag
gatgaggagctgtgtgtggtgtgtcccgtgtgcagagagccactgatgtatgatgtgaag
gctctgctttcatctccagtaccgaacttccctccgcaagaggatgaagctgtcactgct
gagtttaaaagaaagtgggcggagctacagaagattttggaccatcagagagagaaaggc
ggagtcatcgaccccgaggcagagtcaaatcgcttcctcattcacattaaccatgctccg
aatgactcctcagaccccgcctgcactgacgtgccagatcctgactctgcccaacctctg
cctcctcctcctcctctccctcctgagtgctctaatgagagccctcgtgctcctcgagcg
gagaacacctcatgcctgtcccatcgccgagctcctcacactcctcgtgctccttatggc
aggaaacagcatgtggagtttagaggaggcaggagagaccggggaaaaggaggtggtgga
cgaggaggacatgcagctcgtgtggttcctcttcctgtgctggagaacaccctggctaag
ctcagtgtgtctgcagcagaaagcagcaggaacggtggagcactgcaggccaccagtgaa
caccgagacagacatttagtcgaagtcaaagagcagccgagacgggctttaggagacaag
agcgttgaaaccagccatcaggagacaccagagtcgaaacatgaacaggatgtcacatca
gatggagctcaaactggcgcgagagaacgaggaacgagggaggaacgagctgggggaagg
aggcatggaccacgtgggccattgtacagccactggcatgagagaaaccctcagtgggat
aatagcgggaacgtccatcactaccgtcaccatcacagaggagcaagagcaccccgggcg
ggtcatcatagaggaaacgggaaaagcctgtatcagagaaccgagagcgagttaaggaag
gaaggagttctctga
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integrated database retrieval system
