Neoarius graeffei (lesser salmon catfish): 132869210
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Entry
132869210 CDS
T10798
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132869210
03015 mRNA surveillance pathway
132869210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132869210
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132869210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132869210
NCBI-ProteinID:
XP_060758526
LinkDB
All DBs
Position
20:complement(23166797..23213172)
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AA seq
285 aa
AA seq
DB search
MAPSPTKRRERSEDKARERGKDKAVVKEGAEKERGRDKNRKRRSNSTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSASPSPSRRRHDNRRRSRSKSKS
QKRVDEKERKRRSPSPKPTKLHVGRLTRNVTKDHIQEIFSTYGKIKMIDMPSDRCHPNLS
RGYAYVEYETSEDAQKALKHMDGGQIDGQEITATAVLAQRMRPAPRRLTPPRRMPPPPPM
WRRTPPRMRRRSRSPRRRSPIRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcacctaccaaacgcagggagcggtcggaagataaagctcgagagaggggc
aaagataaagctgtggtgaaggaaggtgctgagaaagagaggggtagagacaagaaccgc
aagcgacgcagtaattccactgggagcagcagcagcaggtctaggtccagttccagctcc
agcagcagctctggttccagttcaggttcgtcaagtggctccagctcttcttcaggctct
agtcgctctggctcgtccagttcatcacgttcctccagctcctctggctcctcagcatca
cccagcccgagccgacgtcggcatgacaatcgcaggcggtcgcgttcaaagtcaaagtct
cagaagagagttgatgaaaaagaacggaaaaggaggagccctagcccaaagcccaccaag
cttcatgttggaagattgactaggaatgtgaccaaggatcacattcaagagatcttctct
acgtatgggaagatcaaaatgattgacatgccatcagaccgatgtcatccaaacttgtca
agaggctatgcctatgtcgagtatgaaacttcagaggatgcacagaaggccttgaaacac
atggatggaggtcaaatagatggtcaagaaatcacagctacagctgtcctggctcagagg
atgagacctgcccctcgcaggctgacccctccacgtaggatgcctcctcctccacccatg
tggcgccgtactccgcctcgcatgaggagaaggtctcggtcgccacgtcgccgttcccca
ataagaagacgatctcgctcaagatctccagggcgcagacgccatcgctcacgttccagc
tccaactcctcacgatag
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