Neoarius graeffei (lesser salmon catfish): 132869353
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Entry
132869353 CDS
T10798
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132869353 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132869353 (lrrc4ba)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
NGL family
132869353 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
LRRNT
Ig_2
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
132869353
NCBI-ProteinID:
XP_060758680
LinkDB
All DBs
Position
20:complement(64972539..65010502)
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AA seq
728 aa
AA seq
DB search
MRITTVTGLPNPAPFFFLLAQLLFWLLLLGQDIVGATSTCPTPCSCSNQASRVICTRRNL
DEVPENISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTPLIRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQTHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADTSVNYTYFTTVTVETVESTGEEDSALRVINETIIHIPGPT
PSGRLWHDGIPTTASSVSVFGSSSSPRATKPTFTVSVSEPSYPTGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGASASVRGSGISGGSTMP
QAGSSGGSQSLRLHHPEIVNLPNLARTEHLNHYYKPHHFNNNMMSLGLSGSSGIGLNNNN
NPCSQAQPTPISCSQVPVSVSSIPSSMPLPTLGIHGSLKGLMGKGQNPQIEPLLFKSGSK
ENVQETQI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacggtgaccggccttcctaaccccgcccccttctttttcctattggcc
cagctgctgttttggctcctcctcctgggccaagacatcgtaggagccacgtcgacctgc
ccgacaccttgcagctgctccaatcaagcgagccgagtgatctgtacaagacgaaacttg
gatgaggttccggaaaacatatccaacaacacgcgatacctcaacttacaggagaactcg
atacaggtgataaaatcagataccttcaagcacttgcgacacttggagatcctccagctt
tccaagaaccagattcgtcagattgaagtcggtgcattcaatggcctcccgaacctcaac
actttggaactgtttgacaaccgtctcacactggtgccatcacaagcgttcgagtatctc
agcaagctccgggagctctggcttcgaaacaaccccatcgagactttgccagggtatgcc
ttccaccgtgtgccctcccttcgtcgcctcgatctgggtgaactcaaaaaactggactac
atttcagatgctgcctttgtcggccttgtcaatctgcgttacctgaacctaggcatgtgc
ggcctgaaggacatccccaacctgacacctctgatccgcctggaggagctggagctctct
ggaaacaggctggaaatcataagacctggatcgttccaaggcttggagtctttgcgcaaa
ctatggcttatgcactcccagatgtctgtcattgaacgaaatgccttcgatgacctcaaa
agtctggaagagttgaatctatcccacaattccctgcactcactgccccatgatctcttc
acgccattgcagaagctggagagagtgcacctcaaccacaatccctgggtgtgtaattgc
gatgtgttatggcttagctggtggctgaaagagactgtaccaagtaatacaacttgctgt
gcccggtgccatgcaccacccttcctgaagggcaaatacattggagagctggaccaaacc
cacttcacatgctatgcccctgttattgttgagccccccactgacctcaacgtgactgaa
ggcatggctgctgagctcaagtgccgtactggaacctccatgacatctgtaaactggatt
acacccaatggaaccctgatgacccatggatcataccgcgtccgcatctctgtgctacat
gatggaactctgaatttcacaaacgtcaccttgcgcgacactggtcagtacacttgcatg
gtgaccaactcagctggcaacaccacagcaactgccgtcctgaatgtcactgcagcagat
accagtgtcaattacacctacttcactaccgtcactgttgaaactgtagaatccacagga
gaagaggattcagccctacgtgtgatcaacgagactattatccacatccctggtcctaca
ccatctggacgtctctggcatgatggcatcccaacaacagcttcctctgtatcagttttt
ggatcctcatcttctccccgagcaaccaaacccacatttactgtctcggtctctgagcca
agctaccccactgggctggatgatgtaatgaagactaccaagatcatcattggctgcttt
gtggcaatcaccttcatggcagctgtcatgctggtggtcttctacaagctgaggaagcag
caccagttgcacaaacaccacggaccagcaagagccatagagattatcaatgtagaggac
gagctcggagccagcgccagtgtccgtggaagtggaatctctggtggttccaccatgccc
caggctggatccagtggaggaagccagagcctgaggctgcatcatccagagattgtcaac
ctgcccaacctggctcggacggagcaccttaaccactactacaagcctcaccatttcaac
aacaacatgatgagtttggggctctctggaagctctgggatcggcctcaacaacaacaac
aacccttgttcccaggcccaacccacaccgatctcctgttcccaggtgcccgtctcagtg
agctctattccgtcctcaatgcccctgcctaccctaggcatccatggatcactcaaaggc
ctaatgggtaaagggcagaaccctcaaatcgagcctttactctttaagagtggctccaag
gagaatgtccaagagactcaaatctga
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