Neoarius graeffei (lesser salmon catfish): 132869666
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Entry
132869666 CDS
T10798
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132869666 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132869666 (lamb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
132869666
NCBI-ProteinID:
XP_060758943
LinkDB
All DBs
Position
21:complement(30746731..30845640)
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AA seq
1772 aa
AA seq
DB search
MWILQGAMILALSLAVPAQLLPEANSMCSEGSCYPATGDLLIGRSDRLTASSTCGLHSPE
PFCIISDLQAEKCYECDSRELYNEVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVENVTI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDYGQSWQVYRYFAFNCSASFPHVSQGPVK
SVDDVICDSRYSNIEPSTEGEVIFRALDPVFEIPDPYSQRIQNLLRITNLRVRMVKLHTL
GDDLLDGRDEVKQKYYYALYDMVVRGNCFCYGHASECAPVDESEAGPEGMVHGHCVCNHH
TAGLNCEKCQNFYQDAPWRPAEGRNANECKRCECNHHSYTCHFDMAMYLSSGNTSGGACD
DCQHNTQGQHCESCKPFYYQHPNRDIRDSRICEPCDCDSRGSLNSGVCDSVTDVMKGLIA
GQCRCKENVEGERCDHCKQGYYGLGQDLLGCLSCSCNPLGTLPGGSPCDTDTGMCYCKRH
VTGRNCDQCQPQHWGLSTDKDGCRPCDCDLGGALNNDCSPQTGQCVCREHISGRRCDNMK
PGYYFAALDHEIYEAEEATFTPAVTVVARPLPADRPPTWTGIGFANVPEGETLQFTIDNI
PQSMDYDLLIRYEPQFPDVWEQVKIDVTRTGQPSPFAHCSATYADQQIVSLPPGSRYVVL
PRPLCLEKGQKYTVKMILALFSSNDLQHQPHILIDSIVLLPVVRDLELFSGAADREAAWE
MFQKYRCLENSKSVQKLPMTSICREYIFSTSALLHQGAMECECDPLGSLSTVCDLNGGQC
PCRPNVMGRKCDSCAPGTFQLGPAGCRPCECDPLGSKHAFCNSTTGQCLCLPSVYGRQCA
QCLPRHWGFPQCQPCFCNGHGEHCHPHTGQCLECRDHTTGDQCERCERGYHGNALLGSSD
RCRPCMCPDGPGSGRQFADTCYQNPNSLQFFCVCSQGYKGPRCEECAPGYYGNPKVSGGR
CHPCRCNGNIDMHDPMSCDARTGTCLRCLHNTEGQACQHCRRGYYGDASTQNCQKCVCEL
LGTDSHKCADGECECDQVSGQCPCLPSVEGLHCDRCAPNTWNFHSGKGCQPCQCHPTHSY
SLSCDRMSGQCSCMPGFGGRTCEECRALFWGDPEVKCHACDCDPRGTSTPQCNKSTGACV
CVESVAGQRCDFCGRGYVGTFPDCQPCHQCFHDWDVTVRELTKQTQQLVDTVENLKVTGV
TAAYKDTIDSLEGGAKQLTQILEDDKPQQTLRYSQELLQQAKRVMSDLDRSLNRSEVDIQ
QVSEEHSRVAEELKSLSAETQKQQESIDNTQQQVLHIKHSDPAGAVDSIREYYQQSVEAE
RQVNQATTDVHSPVEQSAGLRQATEAKLDAVKGEFELSQRLDSEILNVLNQELEQDDLSE
LSQQVCGGEWSRDSCGECGGLGCVGEDGEPQCGGQDCKGVITQTNNAWKKAKDLDKDIMN
SLKEVEKLQRMVSTAQGRADESKVSAQDILLKANQSKTRVEQTNQELRELIQQIRDFLTN
GADLERIEALSDEVLKLKMPVVASELKNVTAEIRQHVASLTGVDDILAESAEQAITAERL
LQQARVISEEATQLREEVDKVKVTLNESEHAQSAANDSLKAAKSDLEYTQQQVITVDSET
AASEFMLSNATQRLLDFEKNVSAVRQKTQETSNSAELALNKAGYISEDTEQTRRTLNLEV
QPKFQSAQGLMEEKAEGVSDARQRAEQLQQEAKNLVNDAISRLQNLSELERTFSVNQKTL
AERAQEVEELEKEAQAMLQELSQRVTVYSTCL
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttacagggtgccatgattttggctttgagtttggctgtccctgcacagctt
cttcctgaagctaacagtatgtgttcagagggaagctgttaccctgccacaggtgacctg
ctgattggcagatctgatcgccttacagcctcatccacctgcggactccactcccctgaa
cccttctgtatcatcagtgacctacaggctgagaagtgttatgagtgtgattctcgggag
ctctacaatgaggtcacacaccccaatagccacaccatcgacaacgtggtcacaaccttt
actcccaaccgtcttgtaacatggtggcagtctgagaatggagtggagaatgtgaccatt
caactggacttagaagctgaattccacttcacacatatcatcatgacctttaagacattt
cgtcctgcagcgatggtgatcgagcgttcatcagattatgggcagagctggcaggtgtac
cgttactttgcattcaactgctccgcttcttttccacacgtctcccagggaccagttaag
agtgttgatgatgtcatctgtgattcccggtactctaacatcgagccttcaacagaggga
gaggtgattttccgagcacttgatcctgtatttgagattcctgatccctacagccaacga
atacagaacctcttgagaataactaacctgcgggtgcgaatggtgaagttacacactctc
ggtgatgaccttctggatggccgagatgaggtgaagcagaagtactactatgctctgtat
gacatggttgtccgtggcaactgcttctgttatggccatgcctccgagtgtgcaccagtg
gacgaaagtgaggcggggcctgaaggcatggtccatggtcattgtgtgtgcaatcatcac
acagctggattaaactgtgagaagtgccaaaacttttatcaagatgcaccgtggagacct
gcagagggccgaaatgccaacgagtgcaagcggtgtgagtgtaatcaccattcgtataca
tgtcacttcgacatggcaatgtatctgtcatcgggcaacacgagtggaggagcgtgtgat
gattgtcaacacaacacacagggacagcactgtgagagttgcaagcccttctactaccag
catcccaacagggacataagagactctcgcatctgtgaaccatgtgactgtgactcacgg
ggctcactgaacagtggtgtgtgtgacagcgtgacagatgtgatgaaggggcttatcgct
ggtcagtgtcgctgtaaggagaatgtggagggagagcgctgtgatcactgcaaacaaggg
tattatggacttggccaagacctgctaggctgcctctcatgcagctgtaatcctctgggc
actcttcctggaggaagtccctgtgatacagatacaggaatgtgttactgcaaacggcac
gtcaccggacgaaactgtgaccagtgtcagccacagcactggggcctgagcacagataag
gatggctgtcggccatgtgactgtgatcttggaggagctctgaacaacgattgttctcca
cagacagggcagtgtgtgtgtagagagcacatttctggcagacgctgtgacaacatgaag
cctggttattattttgctgcccttgaccacgaaatctacgaggcagaggaagccacattc
acaccggcagtgactgtggtggcgaggcctctgcccgcagatagacccccaacctggact
ggtattgggttcgccaacgtacctgaaggagaaacactgcagtttaccattgacaacatc
ccacagtccatggactatgacttgctaatccgctatgaacctcagtttccagatgtgtgg
gagcaggtgaagatagatgtgacacgtactggtcaaccttccccgtttgcacattgttca
gctacttatgctgaccaacagatcgtctcacttcccccaggctccagatatgtggtactg
cccaggccgctgtgtttggaaaagggccagaaatacacagtgaaaatgattctagcgctt
ttttcatcaaatgatcttcagcaccagccgcacatactgatcgactctattgtgctgttg
cctgtggtgcgagatctggagctgttctcaggggcagctgacagagaggcagcgtgggaa
atgtttcagaaataccgctgtctcgagaacagcaagagtgtccagaaactacccatgacc
agcatctgcagagaatacatcttcagcacatcagctctgctgcaccagggagctatggaa
tgtgagtgtgacccactcggctctctcagtacggtgtgtgatcttaatggtggccagtgc
ccatgccgaccaaacgtgatgggtaggaagtgtgacagctgtgccccgggtaccttccag
cttggacccgccggctgcaggccatgtgagtgtgacccactgggctcgaagcacgctttc
tgcaattcgaccacaggccaatgtttgtgtttacccagtgtttatggacgtcagtgtgcc
cagtgtttgcccagacactggggcttcccacagtgccaaccctgcttctgtaatgggcac
ggcgagcactgtcaccctcacacaggccagtgcttggagtgtagagaccacaccacagga
gatcagtgtgagaggtgtgagagaggttaccatggcaatgcgttactaggcagcagcgac
cgctgtcgaccctgtatgtgtccagatggtccaggcagtggaagacagtttgcagacacc
tgctaccaaaaccccaactcactccagttcttctgtgtgtgcagccaaggatacaaagga
ccaaggtgtgaggaatgtgcacctggttactatggtaacccaaaggtgtcaggtggacgg
tgccacccgtgccggtgtaacggcaacattgacatgcacgacccgatgtcctgcgatgcc
cgcacaggaacctgtctcagatgcctgcacaacactgagggccaggcgtgtcagcactgt
cgccgtggctactacggagacgctagcacacagaactgccagaagtgtgtgtgcgagctt
ttgggtactgacagtcacaagtgtgcagatggtgagtgtgagtgtgaccaggtgagtggg
cagtgcccatgtctacccagtgttgagggtctgcactgtgaccgctgtgccccaaacacc
tggaacttccacagtggaaaaggctgccagccgtgtcagtgtcatcccacacactcttat
agcctgtcctgtgacagaatgtctggtcaatgctcctgtatgccaggctttggtggcagg
acctgtgaggagtgcagagctcttttctggggtgatccagaagttaagtgtcatgcatgt
gactgtgacccccggggcacgtctacaccacagtgtaacaaatcgacaggagcatgtgtc
tgtgtggagagtgtagccggtcagcggtgtgacttctgtgggcgtggctacgtgggaact
ttcccagactgccagccgtgtcatcagtgcttccatgactgggatgtcactgtgcgtgag
ctgaccaagcagacgcagcagttagtggacactgtggaaaacctgaaagtgacaggagtg
acagcagcctataaagacacaatagacagtctggaaggcggcgccaagcagctcactcag
atactagaggatgacaagcctcagcaaactcttagatactctcaggagcttctgcagcag
gccaagagggtcatgtctgatctggaccgctctctgaaccgctcggaggtggatatacag
caggtctctgaggaacacagcagggttgcagaggagctcaaatcactcagtgcagagact
cagaagcaacaagaaagcattgataacacacagcaacaggtgctgcacatcaaacactcc
gacccagcaggtgcagtagacagcattagggaatattaccagcagtcagtggaggcagag
agacaagtcaatcaagctactacagacgtacacagcccagtggagcagtcagctggtcta
cggcaagccacagaggccaaactggatgctgtgaagggagagtttgagctcagtcaacgg
ctggactctgagatactcaacgtactgaaccaggagctggagcaagatgacctttcagaa
ctcagtcagcaggtatgtggtggagagtggagccgagacagctgtggagaatgtggaggt
ttggggtgcgttggtgaagacggagagcctcagtgtggaggacaggactgtaaaggtgtg
attactcaaaccaacaacgcatggaaaaaagctaaagacctggacaaagacatcatgaac
tcactaaaagaagtggaaaagctccaaaggatggtttccaccgctcaagggcgtgcagat
gagagtaaagtcagtgcacaggacatcctgttgaaggccaatcagagcaaaacacgagtt
gagcaaaccaatcaggagctacgagagctcattcagcaaatacgagactttcttacaaat
ggagcagatctggagcgtattgaagcactatctgatgaagttttgaagttgaagatgcca
gtggttgccagcgagctaaagaatgtgaccgcagagatccggcagcatgtggccagtctg
accggcgtggatgacattctggctgaaagtgctgaacaggcaataacagctgagagactg
ctgcaacaggcacgtgttatcagtgaggaagctacacaactgagggaggaagtggacaag
gtgaaggtgacactaaatgaatccgagcatgctcaatctgcagcaaacgacagcttgaaa
gcagccaagagtgaccttgagtacacacaacagcaagtaatcactgtggactcagagacg
gctgcatcggagttcatgctgagtaacgccactcagcggttgctggattttgaaaagaac
gtgagtgcagtgcgtcagaagactcaggaaacctccaacagtgcagaacttgctctaaac
aaggccggctacatttctgaggacacggagcaaaccagaaggacactgaatttagaggtg
cagcccaagttccagtcggcccaaggcctgatggaggagaaagcagagggtgtatctgat
gcacgccagagagcagaacaactacagcaggaggcaaagaacttagtgaatgatgccatc
agcagattacaaaatctaagtgagctggagcgaacattctcggtgaatcagaagactctg
gcagagagagcacaggaagtggaggagctggagaaagaagcacaggctatgctacaggag
ctcagccagagagtcacagtgtacagcacttgtctgtaa
DBGET
integrated database retrieval system
