Neoarius graeffei (lesser salmon catfish): 132869699
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Entry
132869699 CDS
T10798
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132869699 (usp6nl)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132869699 (usp6nl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
132869699
NCBI-ProteinID:
XP_060759003
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All DBs
Position
21:34178389..34397255
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AA seq
795 aa
AA seq
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MQVLQIVKELVSPSRHRAGSRFAASDGEQDAAVKLDQERAEIVARYDKGVEGGSVEPWEE
ANYDLYKVVDRFGFLHEEELPASNAMEEKQKHLELERTEKWLKMLKSWDKYKNSEKLVRR
IYKGIPLQLRGQVWCLLLDVPKIKEEKKDFYEKLKMRARGLSPDIRQIDLDVNRTYRDHI
MFMRRYDVKQQDLFHVLTAYSMYNREVGYCQGMSQITALLLIYMTEEDAFWALVGLLSGQ
KHAMHGFFVPGFPKLLRFQEHHDRILKKMIPKLKQHLDSQEVFTSLYTMKWFFQCFLDRT
PFTLTLRIWDIYILEGEKVLPAMSYTILKLHKKTLMKHSMEDLVEFLQVALSKDFLFTDD
YVIEQLHMSMSELRRHKLELPPPGKDEEFPTKPLGQLPPEPERLAPEKANHIANGRMEAL
PSPSTATEITVSANGEKKDSVTKTPQKAEKKDGTKEATPTESGKPQGSLSQNLNLGPSGR
RDIGPRWVKPSEGRLAAMMEGHMILSGTVPSSPAMSVANEQRRHHRPRSRGFVPGSNRGS
NASQYDNVPVTDGDVVDVMGFTQVSEPSHQHVAPSVRHGSPTRPPSGGIAAPTFRIPKNP
PVHLMSDPRQPSHHTPGVMPVYSQYPPKMQPENRAYGMAYDERAYGTPTRSTPPNRSPER
VLMNNSYTTYRRQPSNPDFVGQMDNLVESGHFLRQPTRHVDQRYERQWQDQGWHGETDVD
VAFLHTPGRLPRSSSFQKAQLSPVHLGQEFSFPPVPVSDSVMHYRAATGRTQMPTVFGGV
HYRQEAFAMQESMLL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccttcagattgtgaaagagttggtgtctccgtctcgacaccgtgccggctcc
aggtttgcagcttctgacggagagcaggatgccgctgtgaagttggatcaggaacgggcc
gaaatcgtagccagatatgacaagggcgtggaaggtggttcggttgagccgtgggaagag
gcgaactatgacctctataaagtggtggaccgcttcggcttcctgcatgaggaggaactt
ccagcctctaatgccatggaggaaaagcaaaagcatctggaactggagaggacagaaaaa
tggttgaagatgctgaaaagctgggacaagtacaagaacagtgagaagctggtaaggagg
atctataaaggaatcccactacagcttcgaggacaggtctggtgtctcctccttgacgtc
cctaaaatcaaagaggagaagaaggacttctacgagaagctgaagatgagagcgagaggt
ttgtcccctgatattcgtcaaatagatctggatgtgaaccgcacatacagagaccacatc
atgtttatgcgtcgctatgacgtcaaacagcaggacctgttccacgtcctcacggcctac
tctatgtacaacagggaggtgggatattgtcaaggtatgagccagatcactgctctcctc
ctgatttatatgactgaagaggacgcgttctgggctctggtcggactgctgtctggacag
aaacatgcgatgcacggatttttcgtgccaggttttccaaagctgctgcgcttccaagag
catcatgaccgcatcttgaagaagatgatccccaagcttaaacaacatctagacagtcag
gaggttttcaccagtctctataccatgaagtggttctttcagtgctttctggatcgtacc
cctttcacattaaccctcaggatatgggacatctacatactcgagggagagaaagttctg
cctgcgatgtcctacaccatcctcaagctccacaaaaagaccctgatgaagcactccatg
gaggacctggtggagttcctccaagttgctctctcgaaggatttcctcttcactgatgat
tatgtcatcgagcagctccatatgtcgatgtctgaactcagacgccacaaactagagctt
cctcctccaggtaaagacgaggagtttcctacaaagccactcggccagcttccaccagag
cctgagcgattggcaccagagaaagccaatcacatcgctaatgggcgtatggaggctctg
ccctctccaagcacagccacggaaataaccgtttcagcaaacggagagaaaaaagactcg
gtgactaaaacaccacaaaaggcagagaaaaaggatgggaccaaagaagccacgcccact
gagagcggaaaaccacaagggtcattgagtcagaacttgaacttgggtcccagtgggcgg
agagacatcgggccacggtgggtaaaaccatccgagggcagactggcggccatgatggag
gggcacatgatcctcagtggtacggtgccgtcttctcctgccatgtcagtggccaacgaa
cagcgccgtcatcatcgtcctcgctcgcgaggtttcgtgcccggctccaaccgtggctct
aacgcatcacagtatgacaatgtcccagtgaccgatggagatgttgtagacgttatgggt
tttacgcaagtttcggaaccttctcatcagcacgtcgcaccgtctgttagacacggcagc
cctacaaggccccctagtggtggtatcgctgctccaactttccgaattcctaaaaatcca
cccgtacacttgatgtctgaccctcgccaaccttcacaccacacaccaggcgtgatgcct
gtttattcccaatatccacccaaaatgcagccggaaaaccgagcgtatggaatggcatat
gacgagagggcatacggtactccaacacgctccacacccccaaatcgctcaccagaaaga
gtgctgatgaataacagctacaccacataccggcgccagccaagcaatcccgattttgta
ggccagatggacaaccttgttgaaagcgggcatttcctgaggcagcctactcgtcacgta
gatcagcgatatgagaggcagtggcaagaccagggctggcacggtgagacggatgtggac
gtggcgttcctgcacactccgggtaggttaccccggtcatccagctttcagaaagcccag
ctctcacctgtacacctcgggcaggagttcagcttcccaccagtgcccgtctcagacagc
gtgatgcactacagagccgcgactggcaggacacagatgcctacggtgttcggaggagtt
cattaccgacaagaggccttcgccatgcaggagtcgatgctgctctga
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