KEGG   Neoarius graeffei (lesser salmon catfish): 132869726
Entry
132869726         CDS       T10798                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ngra01009]
    132869726 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ngra03036]
    132869726 (kdm5a)
Enzymes [BR:ngra01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     132869726 (kdm5a)
Protein phosphatases and associated proteins [BR:ngra01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132869726 (kdm5a)
Chromosome and associated proteins [BR:ngra03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132869726 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_5 PHDvar_NSD KAR PHD_ash2p_like
Other DBs
NCBI-GeneID: 132869726
NCBI-ProteinID: XP_060759069
LinkDB
Position
21:complement(38867537..38947745)
AA seq 1738 aa
MMAVYTEFLPPPECPVFEPSWEDFSDPLGFINKIRPIAEKSGICKIRPPQDWQPPFACDV
RNFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKLRFPHVERKILDLYLLSKIVS
SEGGFEAVCKEKRWSKIATRMGFPAGKGIGSLLRSHYEKILYPYELFQSGASLSGIHRLC
QERDETEEVDEGIERGCEEDEDEEEKPKETGGKERGGLSDKSQKKAHAVPERRSRRLKSE
FCCRKPTLPLYIDLSSPWHKPTGPLVQRENKEPKGLQIFSSRPKVVDFEIVPADDAFIKK
QKHLKAQAFAIKMRPRKETLEVNFIDLYMCMACGRGDEEDRLLLCDGCDDSYHTFCLIPP
LQDVPKGDWRCPKCVAEVCKECSKPREAFGFEQAVREYTLQSFGEMADHFKSDYFNMPVH
MVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDVGSGFPVRDGKRRLLGDEEDYTNSGW
NLNNMPVLEQSVLAHINADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTW
YGVPAHAAEQLEAVMKKLAPELFDSQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFV
VTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGRQCVAHYRRLQRHCVFSHEELLCKMAAD
PESLDVELAAVVCRELAEVIEEESRLRQAVQDMGLQSSEQEVFELVPDDERQCYKCKTTC
FLSALTCSCSPERLVCLHHAAELCSCPLANKCLRYRYDVEEFPAMLYGVKSRAQSYDTWA
KRVSEALSADQKNKKDLIELKVLLEDAEDRKYPENNLFRKLREMVKEAETCSSVAQLLLN
HKQRHKRERTEISRTRTKLTVEELKAFVEQLYRLPCIISQARQVKELLENVEDFHERAQL
ALADETPDSAKLQVLVELGSGLDVELPELARLKQELQQARWLDEVRLTLHEPQRVTLELM
KRLIDSGVGLAPHHAVEKAMAELQEILTVSERWEDKARACLHARPRHSMITLESIVVEAK
NIPAYLPNVLALREALHKAKEWTARVEAIQNGTNYAYLDQLESLLARGRSIPVRLDALPQ
VESQVASARAWRERTARTFLKKNSTYTLLQVLSPRTDIGVYGSSRSKRRRAKELLEKERG
AEPESLSDLDEAADEERSPSAVVAAFKAQEQQEAEAMHSLRAANLAKMSMAERIDEVRFC
LCRKTAGGVMLQCELCKDWFHGACVPLPKASSQKKLTTGSSWQSASKESKFLCPLCQRSR
RPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRARQALATDELSSALAKLSVL
SQRMVELAAREKTEKIINAELQKAAANPDLQGHIQTFQQAGFNRTTSPRPSLDYDDEETD
SDEDIRETYGYDMKDSGEVKPYLFCDEEIPVKSEEVVSHMWPATPSFCAEHAYSSASKSC
PQNPTTPRKQPRKTPLVPRSLEPPVLELSPAAKAQLEVLMMEGDLLEVSLDETQHIWRIL
QATHPPSEERFLQVESEDTLLEKPMKLKVKEMEKKRKRKLERAEQQLLLASSGVEVRPKC
KDMKRVLEVGGKPKKKKLKLSPEKSRELKQLAKRLAKEEKERKRKEKAAAKAEFAKEGLE
KKKEKKILDIPSKYDWSGAEDSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCV
GVSCEMAENEDYICSACSRKAGGVMGVKVGIETVVMTSAMCSTQTLSPLYQAEVQEGS
NT seq 5217 nt   +upstreamnt  +downstreamnt
atgatggctgtgtacacggagttcctgcctcctccggagtgcccggtgtttgagccgagc
tgggaggatttctctgatccactcggcttcatcaacaagatcagacctatcgcagagaaa
agcggcatctgcaagatcaggccacctcaggactggcagcctccttttgcttgtgatgtg
cgcaacttccgcttcacgccgcgagtccagcggctcaatgagcttgaggccctcaccaga
gtaaaactcaacttcttggatcaaattgcaaagttttgggaactccagggctcgaaacta
cgctttccacatgtggagagaaaaatcctggacttgtaccttctcagcaagattgtgtct
tctgagggaggtttcgaggctgtctgtaaggagaagcgctggtctaagatagccactcgc
atgggtttcccagccgggaagggtatcgggtccctgctgcgctcacactacgagaagatc
ctctacccatatgagctcttccagtctggagcttcactctctggtatccaccggctgtgt
caggagagagacgaaactgaagaggtggacgaaggaatagagcgtgggtgtgaggaggac
gaggatgaagaagagaagccgaaagagacgggaggcaaggagcgaggcggtctgagtgac
aagtcgcagaagaaagcacacgctgttcctgagagacgttcacgacgcctgaagtctgag
ttctgctgcaggaaaccaaccctacctctgtacattgacctcagcagcccatggcataag
cccaccggacctttggtccagagagaaaacaaagagcccaaaggcctgcagatctttagc
agtcgtcctaaggtggtggattttgagatcgttccagccgatgatgcgttcataaagaag
cagaagcacctgaaggctcaagcatttgctattaagatgcgtccacgcaaagagaccctg
gaggtcaattttattgacctgtacatgtgtatggcgtgtgggcggggtgacgaggaggac
cgcctcctgttgtgtgacggctgtgatgacagctaccacaccttttgcctgatcccaccc
cttcaagatgtgcccaagggtgactggcgatgtcccaagtgtgtggcagaggtatgcaaa
gaatgcagcaagccccgggaggcatttgggtttgagcaggctgtgcgtgaatacacactc
cagagctttggagagatggcagaccattttaagtccgattacttcaacatgccagttcat
atggtccctacagagctggtggaaaaagagttctggaggctggtaagcagcatagaggag
gatgtgatcgtcgagtatggagcagatatcagctccaaagacgtcgggagcggctttcct
gtccgagatggaaaaagaagactactgggggatgaggaggactacaccaactcgggctgg
aacctgaataacatgccagtgctggagcagtccgtgcttgcccacattaacgcagacatc
tcgggaatgaaggtgccttggctttacgttggcatgtgcttctcttccttctgctggcac
atcgaggaccactggagttactccatcaactatctgcactggggagagcctaagacttgg
tatggagtcccggctcatgcggcagaacaactggaggcggtgatgaagaaattggctccg
gagcttttcgactctcagcctgatctactgcaccaactggtcaccatcatgaaccccaac
gttctgatggagcacggtgttccagtgtatcggaccaatcagtgcgctggagagtttgtg
gtgacctttccgagagcctatcacagcggcttcaaccagggctacaactttgctgaagct
gtcaacttctgcactgcagactggctacccatgggccgtcagtgtgtggcgcattaccgg
cggctgcagcgtcactgcgtgttctcccatgaggagctgctgtgtaagatggcagcggac
cctgagagcctggatgtggagctggcagcagtcgtgtgccgagagctggcagaggtgatc
gaggaggagagcagactccgacaggctgtgcaggacatggggttgcagtcctcagaacag
gaagtgtttgagctggttccagatgatgagcgtcagtgttacaaatgtaaaactacctgc
ttcttgtctgctctgacgtgctcgtgcagtccagagcgccttgtctgcctacaccatgct
gcagagctctgcagttgtcctcttgcaaacaagtgcctcaggtaccggtatgatgtggag
gagttccctgccatgctgtatggtgtaaagtcccgtgcccagtcctacgacacctgggcc
aaaagggtcagtgaggcactgtcagctgatcagaaaaacaagaaagatctgattgagctg
aaggtgttgctggaggacgcagaggacaggaagtatccagagaacaatctgttccgcaag
ctgagagagatggtgaaggaggcagagacctgctcttctgtagcccagcttctgctcaac
cacaaacagagacacaaaagggagcgcacagagatcagtcgtacacgcaccaagctgacg
gtggaggagctgaaggcgtttgtggagcagctgtaccgtctgccatgtatcatcagccag
gcgcggcaggtcaaagagctgctggagaacgtggaggatttccacgagcgcgctcagcta
gccctggcagacgagaccccagactctgctaaactgcaggttctggtagagctgggctca
gggcttgacgtggagctaccagagctggcacgattgaagcaagagctgcagcaggcgcgc
tggttggatgaggtgcgtctgaccctgcacgagccacagcgcgtcacactcgagctcatg
aagcgcctcattgactctggtgtgggtctggccccacaccacgccgtggagaaagctatg
gcagaactgcaggaaatcctcactgtctccgagcgctgggaggacaaggcacgggcatgt
ctgcatgccaggcctcgccacagtatgatcacccttgaaagcatcgttgttgaggccaag
aacatccctgcctatctgcctaatgttctggctctccgggaagctctccacaaagccaaa
gagtggacagcaagagtagaggccatccagaacggcaccaattatgcgtacctggatcag
ctggagtctttgttagcaaggggccgctccattcctgtacgtctggacgccctgccacag
gtggagtcccaggtagcttcagcacgagcttggagagagaggaccgcacgcacctttctt
aagaaaaactccacctacacactgctacaggttctgagtccccggaccgacattggtgtg
tacggcagcagcagaagcaagcgcaggcgagcaaaagagctgctggagaaagagcgtggt
gcagagcccgagagcctgagtgaccttgatgaggcggcagacgaggagcgctcaccgtct
gctgtggtggctgcctttaaggctcaggagcagcaggaggcagaagccatgcactcactg
cgggctgccaacctggccaagatgagcatggccgagcgcattgacgaggtccgcttctgc
ctgtgccgcaagactgctggaggtgtaatgcttcagtgcgagctgtgcaaagactggttc
catggtgcctgtgtgcccttgcccaaagcaagctcacagaagaagctgacaacaggcagc
agctggcagagtgctagcaaagagtctaagtttctgtgcccactgtgccagcgttcaagg
cgaccccgacttgagaccatcctctcgttattagtgtccctgcagaagcttcctgtgcga
ctgcctgagggtgaggcactgcagtgtttgacggagcgtgccatgagttggcaagaccgg
gcacggcaagccctggccaccgacgaactctcctctgctctagccaagctgtctgtcctc
agccagcgcatggtggagctcgcagcacgtgaaaagaccgagaagatcatcaacgccgag
ctgcagaaagctgctgccaatccagacttacagggacacattcagacgttccagcaggcc
ggattcaacaggacaacctcaccacggccgtctctagactatgacgatgaagagacagac
tccgatgaggacatccgtgagacgtatggctatgacatgaaggactcgggtgaggtaaag
ccctacttgttctgtgatgaggagatccctgtgaagtcagaagaggttgtgagtcacatg
tggccggccacaccatctttctgtgctgaacatgcctactcctctgcctccaagtcctgc
ccccagaatccaaccactccgcggaaacagcccaggaagacgcccctggtgccgcgcagt
ttggaacctcctgtgctggagctgtccccggctgccaaggcccaactggaggtactgatg
atggagggagacctgttggaggtctctctggatgaaactcagcacatctggagaatcctg
caggccacacacccgccctcggaggagcgcttcttgcaggtggagtcggaggacacactg
ctcgagaagccaatgaagctaaaggtaaaggaaatggagaagaagagaaagcggaaactg
gagagagccgagcagcaattactcttagcctcgtcaggcgtggaagttcgccccaaatgc
aaagacatgaaaagggtactcgaggttggtggcaagcccaaaaagaagaagctcaagctc
agtccggagaagtcacgtgagctgaagcaactggccaagcgccttgctaaggaggagaag
gagaggaagaggaaagaaaaagctgcagccaaagccgagttcgccaaggagggtctggag
aagaagaaggagaagaagatcttggacatcccctcgaagtatgactggtcaggtgcggag
gactccaacgacgagaatgctgtctgtgcagcaaagaactgccagagaccatgcaaggat
aaggtggactgggttcagtgtgatggaggatgtgacgagtggttccatcaggtgtgtgtg
ggcgtgtcatgcgagatggccgagaacgaagactacatttgctcggcttgttcacgtaag
gccggcggagtgatgggagtcaaagtgggcatagagactgtggtgatgacgtcagccatg
tgtagcacacagactctctcccccctgtaccaagcagaggttcaggagggcagctag

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