Neoarius graeffei (lesser salmon catfish): 132869795
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Entry
132869795 CDS
T10798
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132869795 (cbll1)
04131 Membrane trafficking [BR:
ngra04131
]
132869795 (cbll1)
04121 Ubiquitin system [BR:
ngra04121
]
132869795 (cbll1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132869795 (cbll1)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
132869795 (cbll1)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132869795 (cbll1)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132869795 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
AraC_N
Motif
Other DBs
NCBI-GeneID:
132869795
NCBI-ProteinID:
XP_060759211
LinkDB
All DBs
Position
21:complement(45714736..45719364)
Genome browser
AA seq
496 aa
AA seq
DB search
MDAIDSDMQGTEGALGGPDVRRRIPIKLLPKQARSKCFHISLIDTRRPWSFNSLPNAIHT
VCIVVWNSNIYIIFLVTESFAYKQEERFDCGVKSGDAYANQRRYPQPFFWDYKLNLIGEK
DETPIHFCDKCGLPIKTYGRMIPCKHVFCYECAVLHERKGDKMCPGLTLYSCTDPVQRIE
QCQRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRASKTSAGRSDPHHLPGSDVSERFR
VPPTHMPKPHVLIPPPLPHATHDPYTQPPPASHDDLRPPPGQAPTSDMGPPRSLAQETFR
ITTVTTRKHSNLITVPIQDDSASSASREPVNAPSHHHPGEYPGQPVVSHPHHMMAPPQQR
YGPPPPPPPITHPMQHPAQVFSQAPPPPLSSVPPPITPPPGHLMSQLPPYMNHPPPGPPP
QHAGPVNAPPPHHYNPQFSEDKGTLSPPFNQPGGLSPGMWPAPRGPPPPRMQGPPPQGQI
PGPHHPDQGRYRPYYQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattgacagtgacatgcagggaacagagggggcattaggaggtcctgatgtt
agaaggaggatacccatcaagcttctccctaaacaggctagaagtaagtgttttcatatt
tccctcatagatacacggagaccttggagtttcaactcattgcccaatgcaattcatact
gtgtgcatcgttgtctggaatagtaacatctatatcatttttctcgtaacagaaagcttt
gcctacaagcaggaggagaggtttgactgtggggtaaaatcaggagatgcttatgctaat
cagcggcgatatccccagccatttttttgggattataagcttaatctgattggtgaaaaa
gatgaaactcctattcatttttgtgacaagtgtggtctccccattaagacttatggacgc
atgattccatgtaaacatgttttctgctatgaatgtgcagtacttcatgaaaggaaaggt
gataaaatgtgcccaggtttgactttgtatagctgtacagacccagttcagcggattgaa
cagtgtcagcgcggctctcttttcatgtgcagcatcgttcagggctgtaaacgtacctac
ctctcacagagagacttgcaggcccacatcaaccaccgccacatgagagcgagcaagact
tcagcaggccgctctgaccctcaccatcttcctggctctgacgtttcagagcgtttccgt
gtgccccctactcacatgcccaaaccccatgtgctcatccctccccctcttccacacgcc
actcatgacccctacactcagccacctcctgcctctcatgatgacctccggccccctcct
ggccaggctcctacatccgacatggggcctcctcgctctctcgctcaggagacattccgc
attactacagtgaccacacggaagcatagcaacctcatcaccgtccccattcaggatgat
tcagcaagctctgcctcccgtgagcctgtgaacgccccgtcacatcaccacccaggagaa
tatccagggcagcctgtggtttcccacccacaccacatgatggctccacctcagcagcgc
tacgggcctccacctcctccacccccaatcactcatccaatgcagcatccagcacaggtc
tttagccaagcccctcctccacctttgtcctcagttcctcctcctatcacccctcctcct
ggacacctcatgagtcagttgccaccgtacatgaaccatcctccacctggccctccacct
caacacgcgggtccagtaaatgccccaccaccacaccattacaatcctcagttctctgag
gataaaggtacccttagcccaccattcaaccaaccagggggactcagtcctgggatgtgg
cctgctcccagaggacctcctccacccagaatgcagggtcctcctccacagggacagatt
ccaggacctcatcatccggaccagggccggtatagaccctattaccagtag
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