Neoarius graeffei (lesser salmon catfish): 132869826
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Entry
132869826 CDS
T10798
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132869826 (mkrn1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132869826 (mkrn1)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132869826 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
132869826
NCBI-ProteinID:
XP_060759274
LinkDB
All DBs
Position
21:complement(48561733..48624818)
Genome browser
AA seq
448 aa
AA seq
DB search
MAEAAAAAASTAAPGTTTGGWTKHVTCRYFMHGLCKEGDNCRYSHDQSSNKSTMICKFFQ
KGCCAFGDRCRYEHIKPAKQEELPGPMPSVPLPAAPLTLAGDSGSMPSGPAGTSKDQERP
HSSVGVDWVNAAEFVPGQPYCGRADPVIVDGPGPLIEEEYEKEQTNKELKKQLCPYAAVG
ECRYGLNCAYLHGDVCDMCGLQALHPSDAAQRSQHIRACIEAHEKDMEISFAIQRSKDMM
CGVCMEVVFEKANPSERRFGILSNCNHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNF
VIPSEYWVEDKEEKQNLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEEP
QPQSQNQRRQNGSNARNRGSRRTPLWDLFDERASNDSLDNDDEEMVTFELSEMLLMLLAA
GTDDDITDSEDDWDLFHEELDDYYELYL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggcggcagcgtctaccgcggctccgggaacaacaacgggaggc
tggacaaaacacgttacctgcaggtatttcatgcacggcctttgcaaagaaggggataac
tgtcgatactcgcatgaccaaagcagcaacaagtcaaccatgatctgcaagttctttcag
aaaggatgctgtgcgtttggagaccgttgcaggtatgaacacatcaaaccagccaagcaa
gaggagctccctggccccatgccctcggtgccgcttcccgctgcccccctcacccttgct
ggtgactctgggtctatgcccagtgggccagctggtacatctaaagaccaggaaaggccc
cacagctccgtgggagtggactgggtcaatgctgcagagtttgtgccaggccagccgtac
tgcggaagggcagatcctgtgattgtggatggtccagggcctctcatcgaggaggagtat
gaaaaggaacaaaccaacaaggagctgaagaagcagctgtgcccatatgcagctgttggc
gagtgccgttatggcctcaactgcgcctatctgcacggtgacgtgtgcgacatgtgtggc
ctgcaggcgctccatccatccgacgctgctcagcgctctcagcacatcagagcatgcatt
gaggcccacgagaaggacatggagatctcgtttgccatccagcgcagtaaggacatgatg
tgtggtgtgtgtatggaggtggtgttcgagaaggccaatcccagcgagcgtcgcttcggc
atcctgtccaactgcaaccactgctactgcctcaaatgcatccgcaagtggaggagtgcc
aagcagtttgagagcaagatcataaagtcctgcccagagtgtcgaatcacatccaacttt
gtcatcccaagcgagtactgggtggaggacaaggaggagaaacagaatctcattcagaag
tacaaggatggcatggggagtaagccatgtcgatattttgacgagggccgtggaacttgt
ccatttggcgctaattgcttctacaagcatgccttccctgatggacgccttgaggaacct
cagcctcagtcccaaaaccagcgaaggcagaatggttctaatgcaaggaacaggggctca
aggcgcacaccgctctgggatctgttcgatgagcgggcaagcaacgactccttggacaac
gacgatgaggagatggtaacgttcgagctgagcgagatgctccttatgcttctggcagca
ggaaccgatgatgacatcaccgactctgaagacgattgggacttgtttcacgaggagctg
gacgattactatgagctctacctatag
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