Neoarius graeffei (lesser salmon catfish): 132869922
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Entry
132869922 CDS
T10798
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132869922 (sox5)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132869922 (sox5)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Mis12
MPS2
Motif
Other DBs
NCBI-GeneID:
132869922
NCBI-ProteinID:
XP_060759458
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Position
21:62711914..63236836
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AA seq
779 aa
AA seq
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MLTEPEIPQEFNRMSSKRPASPYGGTDGEIVMATSRQRLDDDEVDGHAVIHLPLSSYCSS
PRAPDSPPTLHSSTEQESSKGLALSPYPQHNSSTSPSKQQQQDEGLGSVTALGTPERRKG
SLADVVDTLKQRKMEELIKSEPEEAPSIERLLSKDWKDKLLAMGSGHVGEIKGTPDSLAE
KERQLMGMISQLSSLREQLLAAHEEQKKLAASQIEKQRQQMELAKQQQDQIARQQQQLLQ
QQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQQGFLLPPGFNYKPGCNDPYP
LQLIPTTMAAAAAASPGLGPLQLQQQLYAAQLAAMQVSPGSKHSTMPQPNLAGGTHSPTS
GQSEKSRSSPPPKAKDEGAQPLNLSSKPKTSESKSPTSPASPQVPAMKLGPGSVKHSAPS
SIGGPPPRVSSIDLLSSITSGGYLNDHEAVSKAFQEARQMKEQLKREQQVLDAKVAAVNS
LTLNNGRSEKEKAALENLSQQMKQSEENKFTHAMMDFGMSGDSDGSPSVSDSRIFREARG
RGNSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEE
QARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEMRQYFTVGQQAQL
PLSSGGVVYPGALSMAGMPSPQMPSEHSSMSSSPEPAPPTGPPSYLSISKGDEPRIKEEV
LRMDESNGDAYDDFDYEDEDGDFGSDSENHVAQTQKEPRPHPPALLPDTSSSKAQDASE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgctcacagagcctgagatacctcaggagtttaacaggatgtcttccaagcgaccagcc
tctccatatgggggaacagatggagagatagtcatggcaacgagcagacagcgattggac
gatgatgaggttgacggacatgctgtcattcacctgcccctgagctcatactgcagctcg
ccgcgcgccccggacagcccacccacactacacagcagcacggagcaggagagcagtaaa
ggcctggccctgagcccataccctcagcacaactcttctacctcacccagtaaacagcag
cagcaggacgagggcttgggttcagtcacggctctgggaacgccggagaggcgtaaaggc
agtctggccgacgtggtggacacgctgaagcagcgcaagatggaagagctgatcaaaagc
gagcctgaggaggcccccagcattgagaggcttctgtccaaggattggaaggacaagctg
cttgcgatgggctccggtcacgttggagagatcaaaggtactccagacagcctggcggag
aaggagaggcagctgatggggatgatcagccagctgagcagcctgagggagcagctgtta
gccgcccacgaggagcagaagaagctggccgcctcgcagatcgagaaacagagacagcag
atggagctggccaagcagcagcaagaccagattgctcgacaacaacagcagcttctgcag
caacagcacaaaatcaacctcctgcagcaacagatccagcaggtccagggtcagctgcca
cctctgatgattcctgttttccctccagatcagaggactctggcagcagccgcagcccag
caaggattcctcctgcccccaggcttcaactacaaacccggctgcaatgatccatacccc
cttcaactcatcccaaccaccatggcagctgctgcagctgcctcacccggcctcggcccc
cttcagcttcagcagcagctgtatgcagctcagttggcagccatgcaggtatctccgggg
tccaagcacagcaccatgccccagcccaacctggcaggaggaacacactcgcctaccagt
ggccagagcgagaagagcaggagcagcccaccacccaaggccaaggacgagggcgctcag
cccctgaatctgtcatccaagcctaagacatccgagagcaagtcacccacctcccccgct
tccccacaggtccctgccatgaagctgggtcccggatctgtgaagcacagtgccccctca
agcatcggaggacctccgcccagagtcagctccatagacctgctgtcgtccatcacttcc
ggaggctacctgaacgaccacgaggccgtgagcaaggctttccaggaggcacggcagatg
aaggagcagctgaagagagagcagcaggtcctggatgccaaggtggcagcagtgaacagc
ctcaccctcaacaacggacgctcagagaaggagaaagcggctcttgaaaacctgagtcag
cagatgaagcagtccgaggagaacaagttcacacacgccatgatggacttcggcatgagc
ggcgactccgacggaagccccagcgtgtcagattcaaggattttccgcgaggctcgaggt
cgtggtaacagtgaaccgcacatcaagaggcccatgaacgccttcatggtttgggcaaaa
gacgagaggaggaaaatcctgcaggcttttcctgacatgcacaactccaacatcagcaaa
atcctcggttctcgctggaaggcgatgactaatctggagaaacagccgtactacgaggag
caggcgcgtctcagcaagcagcacctggagaaataccccgactacaagtacaagccccgc
cccaagcgcacctgtctggtggacggcaagaagctgcgtatcggcgagtacaaggccatc
atgcgcagccgcaggcaggagatgcgtcaatacttcactgtggggcagcaggcccagtta
ccgctctcctcagggggcgtggtctaccccggcgctctctccatggctggtatgccgtct
cctcagatgccatccgagcactcgagcatgtccagcagccccgagccggctccgcccacc
ggcccaccctcgtacctcagcatcagcaaaggggatgagccccgaatcaaggaggaggtg
ctccggatggacgagagcaacggcgacgcctacgacgattttgattacgaggatgaggat
ggagacttcggcagcgacagcgaaaaccacgtcgcacagactcagaaagagccacgccca
catccccccgccctcctccctgataccagcagcagtaaagcacaggacgcatcagagtaa
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