Neoarius graeffei (lesser salmon catfish): 132870229
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Entry
132870229 CDS
T10798
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
132870229 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngra02000
]
132870229 (slco1c1)
Transporters [BR:
ngra02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
132870229 (slco1c1)
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
132870229
NCBI-ProteinID:
XP_060759840
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Position
21:11171608..11374005
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AA seq
703 aa
AA seq
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MARNFFQENGTYLRRMEPPRKATWSPENGITLKRKRSCCSGLKMFLVALSFAYFSKALSG
SYMKSTITQLERRFDIPSYLVGIIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAIGCLLMS
LGTFLIALPHFIIGRYKFETSVRSSVNSTHNVTPCPASPPRMLPVGNHPSTALNTGCENE
SKLSMWIYVLLGNILRGIGETPVQPLGISYIDDHAPDDSAAFYIGFVQTISVIGPVFGYL
LGSLCAKLYVDIGFVNMEGITITPGDARWVGAWWLGYLVAGLITLLSAVPLWFMPKSLPV
LEGQLSKCPPEQTNFIQDCHKCQADEATSFVELAKDFLPTLRSLLGNPVYILYLCITIIQ
FNSLIGMVTYKPKYIEQHYGQSASKANFLMGIINIPAVALGMFSGGVLMKKFKLGIMGAA
KFALGTSLLGYFLSLFFFALGCENAKVAGITVSYDGIENISIEESSLFVSCNADCLCSET
EWDPVCGENGLTYVSACLAGCRMSRGSGVDMMFEQCSCVAGGNLTAYLGQCKHRESCQQV
FPYFLALSVITSFIISLGGTPGYMLLIRCIKPELKSLALGFHTLTTRTLAGIPAPIYYGA
IIDTTCLKWGHKKCGGKGACRIYNTTAYRIAYLGLTLGLRTVSFFLCVLGLVILQWHVKR
QKTRTLSNGSTITELQALRKEEISNSHQSPRTSDYDPERETHL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaatttctttcaggaaaatggaacttatttgaggaggatggaaccaccgaga
aaagccacttggtcaccagaaaatgggattacactgaaaaggaaacgttcatgctgttcc
ggcctaaaaatgttcctcgtagcattgtcctttgcatacttttcaaaggctttatctggg
agctatatgaaaagcacaataactcagctggagcggcgctttgacatccccagttactta
gtaggcatcattgatggcagctttgaaataggtaacctgctggttattgcctttgtcagt
tactttggtgccaagcttcatcgaccaaaaatcattgccattgggtgtcttctgatgtca
ctggggacattcctaattgcactccctcattttataattggacgatacaagtttgaaaca
tcagttagatcttcagtgaactcgacacataacgtcacaccatgtccagccagtccacct
cgaatgctgcctgtgggtaaccacccctctacagcgttaaacacaggttgtgaaaatgag
tccaagttatccatgtggatctatgtattactggggaacattttgcgtggaattggtgaa
actccagtacagcctttgggaatttcatatatagatgatcatgctccagatgacagtgct
gctttctacattgggtttgttcagacaatttcggtcattggcccagtgtttggctacctg
cttggatctctctgtgcaaagttatatgtagacattggatttgtcaacatggagggtatt
acaatcacaccaggagatgcacgctgggtgggcgcatggtggctgggctaccttgtagca
gggctcatcacactgttgtcagctgtgcctttgtggttcatgcccaagtccctgcctgtg
ttagagggtcaattgtccaagtgcccccctgagcagaccaactttatccaagactgccac
aagtgccaggcagatgaggccaccagctttgtagaattggccaaagattttttgccaaca
ctgaggtcactcctggggaaccctgtctacattttgtacctgtgtataacaatcatccag
tttaattctttaataggcatggtcacatataaaccaaaatacatagagcaacattatggg
cagtcagcatccaaagccaactttttgatgggaataatcaacatcccagccgttgcctta
ggaatgttctcagggggagtgcttatgaagaagtttaagttgggcatcatgggagctgcc
aagtttgcactgggaacatctctgttgggctacttcctttctctgttcttctttgccttg
ggttgtgagaatgccaaagtggctgggatcactgtgtcatacgatgggatagagaatatc
tctattgaggagagctcactatttgtgagctgtaatgcagactgtctgtgctcagagacc
gaatgggacccggtgtgtggtgagaatggtctcacgtatgtctctgcatgcctggctggg
tgccggatgtctcgtggctctggagtggacatgatgtttgagcagtgcagctgtgtggca
gggggaaatctaaccgcctatttggggcagtgtaaacatagggagagctgccagcaagta
ttcccctatttccttgctttgtctgtcatcacttcctttatcatctccctgggtggaaca
ccaggatacatgctactaatcagatgtatcaagccagagctgaagtccctcgctttagga
tttcacaccctgacaacacgcactctagctggcatcccagctccaatatactatggagca
atcattgacaccacgtgtctgaaatggggccataagaagtgtggaggaaaaggagcatgt
aggatctacaacactactgcctacaggattgcatatctgggcctaacactgggcctcagg
acagtttccttcttcctctgtgttctgggcttggtgatcttacaatggcatgtcaagagg
cagaagaccagaacactctctaatggaagcaccatcacagaactgcaagctctgcgaaaa
gaggaaatcagcaactcacatcagtccccaaggacctcagactatgaccctgagagggag
acacacttgtga
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