Neoarius graeffei (lesser salmon catfish): 132870308
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Entry
132870308 CDS
T10798
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132870308 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132870308 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132870308 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ngra00535
]
132870308 (col9a2)
Proteoglycans [BR:
ngra00535
]
Extracellular matrix (ECM) proteoglycans
Others
132870308 (col9a2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
132870308
NCBI-ProteinID:
XP_060759923
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Position
22:30147688..30216084
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AA seq
526 aa
AA seq
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MAQDFHILQIAVLLQVLCLALAQVGLKGPPGPPGPPGQKGDPGQPGPDGPPGNDGIDGPG
LPGLPGPAGPIGLPGEIGLPGPKGTLGLPGPPGLPGPPGKPGLPGKFLGLEEGSADFQCP
TNCPHGPKGPQGLQGMKGHKGRAGLLGAPGSIGKPGPQGLRGYPGVVGRKGETGPQGYKG
ILGPIGLPGIPGKEGPRGPPGESGEKGDRGLPGSPGTKGGVGAKGEPGPRGFVGMSGAPG
PQGEPGPPGETGMAGVPGPKGDRGERGPVGPRGIVGKPGNKGEQGPPGIPGPQGLTGTKG
DKQGVSGDQGHNGPTGDAGKPGDQGPPGLPGPRGIHGVRGVPGMPGIKGPPGSDATDQHI
IEVVLKMMQEKLASLAVSSKRDILGGAGVMGPPGPPGSPGPPGPQGAHGLTGARGIPGMT
GAAGQIGNTGLKGKQGAKGDRGDPGRPHPGLPGPPGLPGPPGLDGVAQDGKPGERGPQGV
AGQPGHPGKAGLPGLPGFCEMAACLAASAYTSPRLQEAGTVKGPST
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggactttcacatcctccaaattgctgtgctcctgcaggtgctgtgtctggct
ctggctcaagtgggtttaaaagggccacctgggcctcctggacctcctggtcagaaggga
gatccaggccagccgggcccagacggtcctcctgggaatgatggaattgatggacctggg
cttcctggacttcctggaccagcaggtccgattgggcttcctggggaaattgggctccct
ggacccaagggaactctgggactgcctggaccaccaggtttgccaggacctccagggaaa
cctgggctgcctgggaagttcttgggtttagaagaaggcagtgctgatttccagtgccca
actaactgtccacatggacctaaaggtcctcaaggtctccagggtatgaagggtcacaaa
ggtcgtgctggtttactgggagctccgggaagcattggaaagccgggcccacagggactg
agaggctatccaggagtggttgggcgcaaaggagagacgggccctcaaggttacaaaggt
attcttggacccattggacttcctggaatccctggtaaagagggacctcgaggtcctcct
ggagagagtggggagaaaggtgataggggtttgcctggaagccctggcaccaaaggtggc
gtaggtgctaagggtgagccaggacctaggggttttgtaggaatgtctggtgctccaggt
cctcagggtgagccagggccaccgggtgaaactggaatggctggagttcctgggccaaag
ggtgaccggggtgagagaggacccgttgggcctcggggaattgttggcaagcctggaaat
aaaggagagcaagggccaccaggtataccaggacctcaaggccttactggaaccaaaggt
gataagcaaggagtgagtggtgatcaaggacacaatggccctacaggtgatgctggaaaa
cctggagaccagggtccgccaggtcttccaggacctcgaggcatccatggagtgagaggt
gtgccaggcatgccaggaataaagggaccacctggtagtgatgccacagatcagcacatc
atcgaggtggtcttgaagatgatgcaggaaaagttagcttctttagcagtgagcagtaag
cgggacatactaggaggagctggtgtaatgggaccaccaggccctccagggtctcccgga
cctccaggtcctcagggagcacatggtcttactggtgcccgaggcatccctggtatgact
ggagctgcaggccaaattgggaacactggccttaaaggaaagcaaggtgcaaagggagac
cgaggagaccctggtcgccctcatccaggtctaccaggcccacctggccttccaggtcct
cctggtctggatggagttgcacaggatggcaagccaggagaaagaggaccacagggtgta
gcgggtcaaccaggtcatcccggaaaagcaggtcttcctggcctccctggcttctgtgaa
atggcagcatgcctggcggcatcagcttacacttccccgcgactccaggaagctggaaca
gtcaagggaccatccacttaa
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