Neoarius graeffei (lesser salmon catfish): 132870620
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Entry
132870620 CDS
T10798
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132870620 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132870620 (nup85)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132870620 (nup85)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132870620 (nup85)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132870620 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_14
4HB_MCP_1
Activator_LAG-3
Motif
Other DBs
NCBI-GeneID:
132870620
NCBI-ProteinID:
XP_060760322
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Position
22:10119475..10169742
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AA seq
654 aa
AA seq
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MEELDVEPTTTLIPGAGLKQKHLGFEWGPGDLLVYETNLKLQGPGSGGSGCPFVHVVRRD
EDIYSPILRKLFNESHHIFVGLQNIKDDLPSKSKKPQFVSISKNYRSVIRACMEELQQAA
GVCAVSTKDTQYSNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEK
AREVLQGESPAQHRAYWDVVMSFVLQGRMDEARQVLQKQASLQPASRAVYQLLDNLLHKM
PVFNPGGTQTLTEFDVKWRHWHEECDRCLQDNSFASSHHLATICKILVGDEDALLEQKEL
LGTWYHLLISRLLFSHPTVKPAELHYYAQSSMDMFLEPHSAPEPLDSILLAAFEFDLHQV
IKDCSFALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFSHHSLWQLA
VDYFDHCPEFGRVYLELQIERVPLETERKALKVLRICEQRQMNEQVHSICKIMAKRALSN
NRLGSALSWSIRAKDAAFATLISERFLQDYCTRGSFSDLDLIDNLGPAMLLSDRLTFLGK
YREFHRLYGEKLFTEAAKLLLSLMTAKIAPRSFWMTLLMDALPLLEQKEVIFSVDQTHEL
LFCLEELTSDNSELKPEHRLQEEDEVESTKLELLRLALARNLAMAIVKEGTVKA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattagatgtggaaccgacaaccacgctaattccaggtgcaggcctgaaacag
aagcacctgggcttcgagtggggtccaggagacctgctggtgtacgagaccaacttgaaa
ttacaaggtcctggctctggaggctccggttgtccctttgtccatgtggtacgcagagat
gaagacatctactcgcccatcctgcgcaagctcttcaacgagtctcatcacatcttcgtc
gggctgcagaacattaaagatgaccttccgagcaagagcaagaagccgcagtttgtgagc
atcagtaagaactacaggtctgtaatacgagcctgtatggaggaactgcagcaggccgca
ggtgtgtgtgcggtatctactaaagacacacagtacagcaaccaggtgtccattctctta
gcaatcgagctcatctggaatctgtgtgaggttcttttcatcgacgctgcaccagctggc
tctctgctgctgcacctgctcgactgggtgcgtttacacaaagctgatgtggatgaaaaa
gcgcgggaggtcctgcagggcgaaagccccgcgcagcatcgtgcttactgggacgtggtg
atgagttttgtcctgcagggccgtatggacgaggctcggcaggttcttcagaaacaggct
tctctacagccggcgtccagagccgtgtatcagctcctggacaacctgctgcacaaaatg
cctgtgtttaatcctggtggcactcagaccctcacagaatttgatgtgaagtggagacac
tggcacgaggagtgtgaccgctgtcttcaagacaactccttcgctagcagccatcacctt
gcgaccatctgcaagatcctggttggtgatgaagatgctctgttggagcagaaagagctg
ctgggaacctggtaccatttactgatcagccgtctgctgttctctcatcctactgttaaa
cctgctgagctgcattactatgctcagtcgagtatggacatgttcctggagcctcacagt
gctcccgagcctctggacagcatcttactggctgcatttgagttcgaccttcaccaggtt
attaaagactgcagctttgccctgaataactggtggtttgtagctcacctgactgacctg
ctggatcactgcaaactcctgcagtcacacaacctccattttggctctaacctgcgggag
ttcctggtgctggagtacgcctccggactcttctctcatcacagtctgtggcagctggcg
gtggattatttcgatcactgccctgagtttggccgtgtgtatctggagctgcagattgag
agagtgccactggagacggagcgcaaagcgctgaaggtgctcaggatctgcgaacagaga
cagatgaatgagcaagtgcacagtatctgtaagatcatggctaaaagggctctcagtaat
aacagactgggttctgctctgtcctggagtatcagagcaaaagatgcagcctttgccacc
ctcatctctgagaggtttctgcaggattactgcacacgtggctcattttctgatctggat
cttatcgataacctcggacctgccatgctcctcagcgacagactcacattccttggaaag
taccgagaattccaccggctgtatggagaaaagttgttcactgaggcagcgaagctcctg
ctgtccctcatgacggcaaagatcgcgcctcgtagcttctggatgactctgctcatggac
gccctgcccttactggagcaaaaagaggtgatcttttcagtggatcagacccatgaactc
ttgttctgtttggaagagctgacctctgacaacagtgagctcaaaccagagcatcgatta
caggaggaggatgaggtcgagtccacaaaactggagctgctgcgattggctctggcgcgt
aacctggcgatggccattgtgaaggaaggaacagtcaaggcctaa
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