Neoarius graeffei (lesser salmon catfish): 132870669
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Entry
132870669 CDS
T10798
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132870669 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132870669 (gga3b)
Membrane trafficking [BR:
ngra04131
]
Endosome - Golgi transport
Others
GGA
132870669 (gga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DASH_Dad4
VCIP135_N
cas_Cpf1_2nd
EF-hand_14
DUF2096_N
HBM
SesA
DUF6675
Motif
Other DBs
NCBI-GeneID:
132870669
NCBI-ProteinID:
XP_060760410
LinkDB
All DBs
Position
22:complement(14453023..14479801)
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AA seq
713 aa
AA seq
DB search
MAYQEGETLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQIAIQLLVHKIHSPQEW
EALQALTVLEACMKNCGRRFHNEVAKYRFLNELIKVVSPKYMGEGVSERVKTKIIEMLYS
WTVAFPNEAKISEAYQTLRRQGLISSDPELTADKTLIPSPPSRPKNPVFDNEDMGKLLAE
LLRSKNPEDLQEANRLIKNMVKEDDARVQKMTKRMNTLEEVNNNVKLLSEMLSHYDQDRS
SDADRDLIKELYERCDKLRRTAFKLATETEDHDTSLGEILQASDELERVINLYKKVVKGE
TEGETTEEQKPALGKGEKTHTGCETDTLIDLAGLDELPAPQTAPPTQVSRAPLTNQTSCS
IPVIPPPPRRLAGGSASQTSSPIHKTSEPSPAHSLLDDELLSLGLNEPPPVQSRPKLEDA
SNKWTSLQAPAPPGLDLFSDEVLSSGTALPPPHTSGHPTHHDGVNQGLQDLAMLNLGEVK
SVSGQPTMAAGVGLGFAVPSSLSSSNPFISSTMPGSPLRSLQGNSVRSEASLSNLHVPLD
SIKTNLDIDTPTSWRVLFTWLAVVKGFLFAMEIILRSSTTVVSCKALPVTAYDKDGVRVL
LHFGSECPPGRPDVLVIVVSMLNTAPLAVKNIELQAAVPKSMKVKLQSPSGAELTPFNPI
LPPSSITQVMLLANPLKEKVRLRYKLMFLLGERQYCEVGELDQFPPPERWGNL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaggaaggagagacgctcgaatcgtggctcaacaaagccactcacccaacg
aacaggcaggaggactgggagtacatcatcggcttctgtgaccagatcaacaaggaactg
gaaggtccacagattgctatacagcttcttgttcacaaaatccactcacctcaggaatgg
gaggctctccaggcattaactgtgttggaggcctgcatgaagaactgtgggagacggttt
cacaacgaagtggccaaatacaggtttttaaacgagctcatcaaagtggtttcccccaag
tacatgggagaaggagtctctgagcgggtgaagacgaagattattgaaatgctgtacagc
tggactgtagcgtttcctaatgaggccaaaataagtgaagcataccaaactctgaggaga
caaggactcatctcatcagatcctgagctgacggccgataaaactctgatcccgtctcca
ccttctcgccctaaaaacccggtgttcgacaacgaggacatgggcaagttgttggcggag
ctgcttcggagtaagaaccctgaggatctgcaggaggccaacaggctgatcaagaacatg
gtgaaggaggacgatgctcgggttcagaaaatgaccaaacgcatgaacacgctggaggag
gtaaataataatgtcaagctgctgagcgagatgctgagtcattacgaccaagacaggtca
tcagacgcagatcgtgacctcatcaaggagctgtatgagcgctgtgacaaactgagacgc
acggcattcaaactggccacagaaacggaggaccacgacactagtttaggtgaaattctt
caggctagcgatgagctggagagagttataaacttgtataagaaggttgtaaagggcgag
acagaaggagagaccacagaggaacagaaaccagcactcgggaaaggtgaaaagacacac
acaggttgtgagacagacacactcattgatctcgctggtctggatgaactgcctgctccc
cagacagctccgcccacacaagtctccagagcacctttgaccaaccagacttcttgcagc
attccagtgatcccgccccctcctcgccgattggctggaggatctgccagtcagaccagc
agcccaattcacaaaacctcagagccttcaccagcccactccctgctcgacgatgagctg
ctgtccctagggttgaatgagcctcctccggtgcagagcaggcccaaactggaagacgca
tctaacaagtggacgtctttacaggctcctgctcctcctggactcgacctgttctctgat
gaagtgctatcatcaggcaccgcgcttcctcctccacacacctcaggccaccccacacac
catgacggggtgaatcaggggctgcaagatctcgccatgctgaacctgggagaggtgaag
agtgtctcaggtcagcccaccatggccgccggtgttggtttgggtttcgctgtgccctcc
tccctctcctcgtccaatccgtttatcagctccaccatgcctggctcgcctctgcgctct
ctccagggaaactcggtgcgctccgaggcatccctcagcaacctgcatgttcccctggac
tccatcaaaaccaatttggatattgatacacctacctcctggagagtgttgttcacttgg
ttggctgttgtgaaggggtttctcttcgccatggaaattattctgcgatcatccaccact
gttgtctcctgtaaggctcttcctgtgactgcatacgataaagacggagtgcgtgtcctc
ctgcactttggctccgagtgtcctcctgggagaccggacgtcctcgtcatcgtggtgtcc
atgctgaatactgctcctctcgcagtgaagaacattgagctacaggccgcggtgccgaag
tctatgaaggtgaagcttcagagtccctcaggagccgagctgacgccctttaaccctatc
ctgcccccttcctctatcacacaggtcatgcttctcgctaacccgcttaaggagaaggtg
cgtctgcgctataagctgatgttcctcctcggggagagacagtactgtgaagtgggtgaa
ctggatcagtttcctccgcctgaaagatggggaaacctgtag
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