Neoarius graeffei (lesser salmon catfish): 132870797
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Entry
132870797 CDS
T10798
Symbol
vars2
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132870797 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ngra01007
]
132870797 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132870797 (vars2)
Enzymes [BR:
ngra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
132870797 (vars2)
Amino acid related enzymes [BR:
ngra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132870797 (vars2)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132870797 (vars2)
Prokaryotic type
132870797 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
DUF4614
Motif
Other DBs
NCBI-GeneID:
132870797
NCBI-ProteinID:
XP_060760657
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All DBs
Position
22:complement(24286830..24351499)
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AA seq
1074 aa
AA seq
DB search
MWRHTWGRCSRPGYGVWSTWRRKLCSRLSSSSSSQPLQSLRSQSEKAKRKRKRETAIQSS
DVDSVGMKWSEKEKITYTAAFLPGEKKDTTLPLPQSYSPEYVESCWYQWWEQQGFFSPEK
HSEMPQAVDKYFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYRVLWVPGCDHAG
IATQSVVERRLFQEQGKRRQDYGREEFLQEVWRWKNEKGDEIYRQLKKLGASLDWSRACF
TMDTNFSNAVTEAFVRMCDSGLIYRSESLVNWSCALESAISDIEVDSKQLSGRTLLSVPG
YQRKVEFGTMVTFAYPIEGQKGEVSVSTTRPETMLGDVAIAVHSDDPRYQALHGKQCRHP
FTDRLLPIITDTTVDMELGTGAVKLTPAHDHTDFRLSQRHSLPRLTVIGGDGTMTSLCGQ
WLQGVKRFDARERVISALMERKLFRGKRDHPMSLPICSRSGDVIEPLLKKQWFVRCEEMA
QKAIQVVDDGELEIIPHFYTKTWKKWLTNISDWCISRQLWWGHQIPAYRVTSPFSPTQEE
QWVWGRSESEARERAAAKFGVDPNAVVLTRDPDVLDTWFSSALFPFAMLGWPEQTEDLKQ
FYPNSILETGSDLIFFWVARMVMLGTALTGQLPFNQVLFHSLVRDKYGRKMSKSLGNVID
PLDVISGVSLEKLQEKVMEGNLDERERALALEAQRKDFPKGIPECGTDALRFALCSYKAQ
GEDISMSVSQVLSCRHFCNKMWQTVRFTLGALLDARAPLTTLAETFPASRIDRWICSRLY
STVIQCDKGFESYELHTVTSALHSFWLHSLCDVYLECIKPVLKRDVNENEVRDEEKQIAS
AVLYHCVSISLRLLSPFMPFLTEELWQRLQPYSPDPSPASSSVCVQPYPTASQLGHWYFP
EEETDFPMVQEVVRVARSLRAQCHITKEKPDMLAVCTADQAQTLHSFRRAICILGRISNL
HLHCPQEGTSSLPFSTAPPPDMESAIGVTDHSVQLHLDVQSCRNSNKQMILLSQRREKLL
FQLEQFLSRTRVPNYTEKVPDHVRQETGNKITALEQEIKSIEKQXLEPVKKDSR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacacacctggggcagatgttccagaccagggtatggagtgtggagtacatgg
agacgaaaactctgctctcgactttcctcctcatcttcatcacagcccttacagtctctt
aggtctcagtctgaaaaggccaagcggaaaagaaagagagagacggccatacaaagcagc
gatgttgacagtgttggcatgaaatggtcagaaaaagaaaagataacatacactgctgca
ttcttgcctggagagaagaaagataccactctgcccctcccgcagtcctatagcccagaa
tatgtggagtcgtgctggtatcagtggtgggaacagcaggggttcttcagccctgagaag
catagtgagatgccacaagctgtggataaatatttctccctgtgtatccctccaccgaat
gtgacgggcacgctgcacctcggccacgctctgacagtggcaattgaggacgctttggct
cgctggcggcgaatgcaaggctacagagtgctgtgggtgccgggctgtgatcacgctggg
atcgcaacacagtctgtggttgagaggaggctgttccaggagcagggaaagcggcggcag
gactacggtcgagaggaattcctgcaagaggtgtggagatggaaaaacgagaaaggagat
gagatttatcgacagttaaagaaactcggagcttcactggactggagcagggcttgtttc
accatggacacgaatttcagtaatgccgtgacggaggcttttgtgaggatgtgtgattca
gggctgatctatcgctctgaaagcctggtcaactggagctgcgcgttagagtcggccatc
tccgatatcgaggtcgactcgaagcagttatcaggccggactcttctgtctgttcctggc
taccagcgaaaagtcgaatttgggaccatggttacgttcgcctacccgatagagggacag
aaaggagaggtttctgtatcgaccactcgtcctgagaccatgctgggggacgtggccatc
gctgtgcattctgacgatcctcgataccaagctctccatggaaaacagtgcagacaccca
tttactgacaggctgttacccataatcacagacactacggtggacatggaattgggaacg
ggagctgtgaagctgactccggctcacgatcacactgacttccggctctctcagagacac
tcgctgcctcgcctcactgtgatcgggggagacggaactatgacgtccctttgtggccag
tggctccagggcgtgaagcgattcgatgccagggagcgtgtgattagtgcactgatggag
agaaagttgtttcgagggaagagagatcatcccatgtctttaccgatatgcagccgatct
ggagacgtcattgaacctctgctgaagaaacagtggtttgttcgatgtgaggaaatggca
cagaaggcaattcaagtcgtggatgatggagagctggaaataattcctcacttctacact
aaaacatggaagaaatggctcactaatatcagtgattggtgcatttctagacaactttgg
tggggacatcaaattccagcttacagagtgacatcaccattttctcccacacaggaggag
cagtgggtttggggccggagtgaatcggaggccagggaacgtgctgctgctaaattcgga
gtggaccctaatgctgtcgttctgactcgagatccagatgtgttggatacgtggttctct
tcagctctttttcctttcgcgatgttgggctggcctgagcagacggaggacctgaagcag
ttttatcccaactccattctggagacaggaagtgacctcatctttttctgggtggcccgg
atggtaatgctaggcactgcgctgactggacagctgcccttcaatcaggttctcttccac
tccctggtgagagataaatacggccggaagatgagcaagtctttaggaaatgtcatcgac
cctttggatgtaatctcaggtgtctctctggagaaacttcaggaaaaagtgatggaagga
aacttggatgaaagagagcgagcacttgctctggaagcgcagagaaaagatttcccaaag
ggtatcccggaatgtggcacagatgcgttacggtttgctctctgctcgtacaaagcccag
ggagaggacatcagcatgtctgtatctcaggtcctgagctgcagacacttctgtaataag
atgtggcagacggtccgcttcactctgggagctctgctggacgcacgagctcctctgacg
acacttgcagagacctttcctgcgtcgaggatagacagatggatctgctcgcgactttac
agtacagtgatacagtgtgataaaggctttgagagctatgagctccacacagtcacctcc
gctctgcattccttctggctccacagcctctgtgacgtgtatctggaatgcattaagccg
gttttgaaacgggacgtaaacgaaaacgaagtgcgagatgaagagaagcagattgcctct
gctgtgctctaccactgcgtgtccatttctctccgcctcctttcccctttcatgcctttt
ctcacggaggagctctggcagagactgcagccctatagcccagacccctctccagcttcc
tccagtgtgtgtgtgcagccatatccaacagcctctcagctgggccattggtactttcct
gaagaggaaacagattttccgatggtgcaggaagtggtcagggtggccagatcactcaga
gcccagtgtcacatcacgaaggaaaaacctgacatgttggcagtgtgcacagcagaccaa
gcacaaacacttcacagcttcagacgtgctatctgcatcctgggccggatctctaacctt
catctgcactgccctcaggagggcaccagctccctccccttctccactgcaccacctcca
gacatggagagtgccatcggggtgactgaccattcagtccagttacacctcgatgtacag
agttgcaggaatagtaacaaacagatgatcctactttctcagcgtagagaaaaacttctc
tttcaacttgagcaattcctgtctcggacgagagtaccaaactacacagagaaggttcct
gatcacgttcggcaggaaaccgggaataagatcacagcactggagcaggaaataaagagc
attgagaaacaanctttggagccggtcaaaaaagactccagatag
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integrated database retrieval system
