Neoarius graeffei (lesser salmon catfish): 132870890
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Entry
132870890 CDS
T10798
Symbol
cica
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132870890 (cica)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132870890 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
132870890
NCBI-ProteinID:
XP_060760819
LinkDB
All DBs
Position
22:complement(43415486..43582146)
Genome browser
AA seq
2469 aa
AA seq
DB search
MKPFKKQGRRSPPSTRAKGSKRRLTDPSPEEEKRDTEEKPRLSPSSPKRLVSSNSDSSQD
ELVRTIRTPEREGKREGILDVSEDYGNAKEHSQSFKSGGTQSDSNSPNPSSSRKTATFKA
RVPKKKYTSEHYAGNHGNDGNSNTPPQSNSSMPHNCSSACQDNTSGAEYTDTVSQINQVP
VASTSGVIQNNMSALSNRLGAESSEREKINTSSPQRCSSTDTASEHSADLEVTTQQPGSH
SSVQGGPSHVRPETPQENLPAGLSQTLAKGLKNQRVLARVNTRRGDSWPPDKGQESSGVF
CAGVVREVSGEHGSVEVQLHGEETICKYPFRVVNDTVDVILDAPPPGHASVPIGTRVCVP
FGGGSEGSEGAQQWYREGLITQVDPHPAVSFPYRVQLQNDPADEKDRTGPEEDWRGKTAQ
AVWVSRQSLRLLVPPWDLELPQTTDQEKGGRRVGEREREWEDKEEMEMESELCRFSMVHG
VTGPVLVTGLLQPETSSLPLPSSCPISTAITSVLSIAPDRPWDCSRQKELEKERELQRQS
EKERERERISLQAPAPEEDMEVSHFSMAPLREGGLTLAMGTKPSGVPSQHRPILSKPDYL
SPHLSVVRGIGTPLAPHLSLGPSPILLGMDATAGAAVISSTPQLPPLPPSSSRSSLEKTS
TSSSHGTSGGGSSSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSREG
CSKESQRRGYCSRHLSMRTKEMEAGGSLGRDRSGASSTGTLTPDLRLGGRTSSEIDWDET
SHDSSEASSRGGDSRPRLILPSLLPQELPRDLSRFDFDECEAANMLVSLGSSRSGTPSFS
PVSNQSPFSPAPSPSPSPLFGFRPANFSPITPPSSLTPRRPRHLSGTKLGTPSAERDRHL
SGIMPTFQTNLTFTVPMSPSKRKLDVPPPPLPIAPDYTKSDPQLSDLPLGLSSAAFRAVS
PQSQSNTPSLSFTRPRSTTSRPSSSAASTPPPMLVSPTPPSPLPQDPSSRRIVPLRDSPV
IVRNPDVPLAKFSDGPLSGRTGSHSREHTQPSHLAVGLQAPIPINRAATNGTVLLRNSAP
TLVLVTSAQSLTTAASGHQTYSSQSPSCVSSSGIATGPASSGSGGREQDRKPGDHADVQG
GILPQPVACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVEPRSVQVFPWHSLV
PFLETSQTNSSNHPIDGQTQSKEPLCGVALMTDDQSVVERASPSCPPPFVGEPPAERVGD
SETESDADDLFYSGGAQDPAPLTGPVKRRTQSLSALPKDSDKKREKDHIRRPMNAFMIFS
KRHRALVHQRHPNQDNRTVSKILGEWWYALGAKEKQKYHDLAFQVKEAHFRAHPDWKWCN
KDRRKSLSEGRGTPGAKEPRERSASESTETQSVSQRGEHKGAGPSWVSPESEHWGGPAGG
QLTRPRALSQSAVHSPDRREGEKDLVKNEVSSFQTCTPPISQRRTSEDVTSDEEPMVICE
EEGDDDVIGDSFPEGSIDLKCKERVTDSDEENDPADETDGKRMVHSILLSSPGDESANKE
TEHKGERTESKIKQETEAGDVCERIKEGKEGGRGMGDGGTDQVPKCFSINGTFSSEAKEI
QVPGTVRTAPTVVTNVVRPVTSAPIAIASKPAEGGMSLGAPYPDEKPKLLIGGGAAAGIG
AKPVGQGGLVTGLVLGGAFPNPPTVRLITPPQPLPGPTTSNGVPNNSAVPLPLLQPQFLP
AASLTPPTNGKQVTQVQYILPTLPATATRNSPSSQQTHQSTGVLALPTALPAHLSLSNGL
HAGSGPGMRYASVPAVGGVSTGARARSPVLQNKMLVPMTTVRPGSTPPQPISLVAQPLPV
QNGVQPGSKLIQIAPMPVVQTNVQPARTVHSAASFPVSMATATVMASGVTSPQTVLLTPS
ATRITYVQSTTGVATPLSLGSTTAVSTPQRAVPPHTQAFLPSAMATLGFTAIAPAGPTLV
HPVVTGQPPLLAQVPSPSCLPQSSASESSRQLVTALYPGPSVTLATGVVSMTTTSQNVTN
PLPVLTSPSSPHMKTSVASDVHFHSHTYTDSLSQVTLKMESLKRPDADTHREAVLSNTSS
QMEELGRLVSPTPHLHSGSKAGSPKLPLSPQKIKAQVEYPSSRQEGEEQDGKKASTMEHD
SERDGGGMGSIWIEKAVRERGTEGAPKSPLTNNKEEHGREAGQKEVDLPPPPMQTDTPAL
KKNKSRPPPLKSTTGSVDKVMSGTYFEERLAELPEFKPDDALPSPSLQNLATSPRAILGS
YRKKRNSTDLDSIDDPSSPRRKSRRLSSCSSEPNTPKSAAKCEGDIFTFDRTAGETEDIL
GELDRVPYSLRRTLDQRRALVMQLFQEQGSFFPSAQATVAFQARYSDTFPTKVCLQLKIR
EVRQKIMQTATPGSSEATVMGGPFSGSDSACAPGPSNPVTGEDGVARVDEKGCEWEKPKP
GMDESQDLR
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttttaaaaaacaaggcagacggtcacctccatccacacgagccaaagggagt
aagagaagactaactgatccaagcccagaagaggagaagagggacacagaggaaaaacct
aggctctcaccctcctctcccaagagattggtgtcctcaaattcagactcatcacaggat
gagctagttagaaccatcaggaccccagagagagagggaaaaagagaaggaatactggat
gtatcagaggattatgggaatgcaaaagaacattctcagagcttcaaatcaggtggaaca
cagagtgacagtaacagccccaatccctcatctagccgcaagacagccacctttaaggcc
cgtgtgccgaagaaaaaatatacctctgagcactatgctggaaaccatggcaatgatgga
aattcaaatactcctccacagagtaacagcagtatgcctcacaattgttccagtgcttgt
caagacaacacctctggagctgaatacacagatacagtcagtcagatcaatcaggtacct
gtagccagcacctcaggggtcatacagaacaacatgtcagcactgtcaaacagattggga
gctgaaagtagtgagagagaaaagataaacacatctagtcctcagcgttgctcctctaca
gacacagccagtgagcactcagctgaccttgaggtaacaacacagcaacctggatctcac
tccagtgttcaaggaggcccatctcatgttagacctgagactccacaggaaaacctacca
gctgggctttcacaaacacttgctaagggtttaaagaaccagagggtcctggccagagtg
aacacaagaagaggggacagttggccacctgataaaggacaagagtcatcaggagttttt
tgtgctggtgttgtacgagaagtcagtggagagcatggaagtgtggaggtgcaattacat
ggagaggaaacaatatgcaaataccctttccgagtggttaatgatacggtagatgttata
ttagatgcaccccctccagggcatgcatctgtgcccataggaacacgtgtgtgtgtgccc
tttggaggtggcagtgaaggcagtgagggggcacaacagtggtacagagaaggcctgatc
actcaggtggaccctcaccctgctgtttccttcccttatcgtgtccagctccagaatgat
ccagcagatgaaaaggatagaactggaccagaggaggactggaggggcaaaactgctcaa
gcagtgtgggtctcacggcagagtcttcgccttctggttccaccatgggacctggagctg
cctcaaactactgaccaagagaagggtggtcgaagggtgggagaaagagagagggagtgg
gaggacaaagaggagatggaaatggaatcagagctgtgccgtttcagcatggtacatggg
gtaacaggaccagtcttagttacaggactgttacagcctgaaacttcttcattaccactc
ccctcatcttgtccaattagcactgccatcacttccgtactaagcatagctccagacaga
ccttgggactgcagccggcaaaaagagctggagaaagagagggagttgcaaaggcaatct
gaaaaagaacgagaaagggaaaggatttctttacaagcaccagccccagaagaggacatg
gaggttagccatttcagcatggctccactcagggagggtggcctcactttagccatgggc
accaaaccttcaggtgtgccctcccaacatcgacccattctctctaagcctgactacctc
agccctcatctgtcagtggtgagaggcataggcacaccattagcaccccacttatccctt
ggcccctcccctatactactgggaatggatgcaactgcaggggctgcagtcatctcttct
accccacagttgcctccactgcctccctcttcttctcgcagctccttggagaaaacatcc
acttccagctcccatggtacatcagggggaggctctagctcatcttcttcatcacgttcc
cggacacctctcacagctgctcagcaaaagtacaaaaagggggatgtggtatgtactcct
acaggaatccggaaaaagtttaatgggaagcagtggcggcgactgtgctctcgtgagggc
tgttctaaggagtcccagcgacgtggctactgctcccgtcatctctctatgcgtactaaa
gagatggaggcaggaggcagtttgggcagagacagaagtggtgccagcagtacaggcacc
ctcacacctgatctccggttaggaggtcgtaccagcagtgagattgactgggatgagaca
tcacatgacagtagtgaagccagcagtcgtggaggagattcacgccctcgtctaattttg
ccttcccttctaccgcaagagctgccacgtgatttgtcacgctttgactttgatgagtgt
gaggcagcaaacatgttggtgtctctgggcagctcacgctccggcactccctcattctcc
cctgtgtccaatcagtcaccattctcccctgccccatctccttcaccatctccactcttt
ggttttcgcccagccaatttcagccccatcactccaccttcatctctcactcctcgccgt
ccacgccatctcagtggtaccaaactgggtactcccagtgcagagcgggatcgccaccta
tctggcattatgcccacttttcagaccaatctgacctttactgtgcctatgagtcccagc
aagcgtaagttggatgttccaccacccccacttccgatcgcacctgattatactaagtct
gatccccaattaagtgacttgccactgggtctcagttctgcagccttcagagcagtatca
cctcaaagccagtcaaacacaccttcactttcttttactcgaccaaggagcacaaccagt
cgtccgtcatcttctgctgcatccacccctccacctatgttggtttctcctacacccccc
tcaccactgccacaggaccccagttcacgacgtattgttcccctgcgtgattcacccgta
attgtccgcaatcctgatgtgccactggcaaaattcagtgatggccccttgagcggaaga
acaggttcccactccagagagcacactcaaccatctcatcttgctgtgggtctccaggct
cctattcccattaacagagctgccacaaatggtacagtactgctccggaactctgctccc
accttggtgctggtgacctctgcccagtcactaactactgcagcatctggtcatcaaacc
tactcaagccagagccccagttgtgtttcttcttctggtatagccactggtcctgccagt
tcaggctctggagggagagagcaagacagaaagccaggtgaccatgcagatgtacaagga
gggattttaccacaacctgtggcctgccatccgagtcccactgccctactgcctctcatt
ctaccagcagagtctccacatcctgcccctcgcaaagacattataatgggacgacctggc
acagtctggacgaatgtggagcctcgctcagtgcaagtgtttccctggcattcattagtt
cctttcctggagaccagccaaacaaattcatccaaccatcctatagatggtcaaacacaa
agcaaagagccattatgtggagttgctctcatgactgatgaccaatcagttgttgaaaga
gcgtcgccctcctgcccaccaccctttgtaggtgaacctccagcagaaagagttggagat
agtgagacggagagtgatgctgatgatctcttttactcaggtggagcccaagatcctgcc
ccactgactggtccagtgaagagacggacacaatcactcagcgctttgcccaaagacagt
gacaaaaagagagagaaagaccacatacgccggccgatgaatgccttcatgatcttcagt
aagcgtcatcgtgctctggtgcaccagaggcacccaaaccaggacaatcgcacggtcagt
aagatcttgggtgagtggtggtatgctctaggtgccaaggagaagcagaaataccacgac
cttgccttccaggttaaggaggctcatttcagggctcaccctgactggaaatggtgtaat
aaggacaggaggaagtctttgtctgagggcagaggcactccaggggctaaagaaccccga
gaacgaagtgcttctgaaagcacagagacccagtcagtttctcagcggggtgagcacaag
ggagcaggacctagctgggtgtcaccagagtctgagcactggggagggccagcaggaggc
cagctgacacggcctcgtgctttgtcccagagtgcagtgcatagcccggacagaagagag
ggagaaaaggatcttgtaaagaatgaagtaagttcatttcagacttgcacccctcctatc
tcacagcgtaggactagtgaggatgtaactagtgatgaagaaccaatggtcatctgtgag
gaagaaggagatgatgatgtcataggtgattcatttccagaaggctcaatagacctaaag
tgcaaagaaagagtgacagacagtgatgaagagaatgaccctgcagatgaaactgatggc
aagcgaatggttcattccatcttgctctcatctcctggagatgaatctgcaaataaagag
acagaacacaagggagagaggacagagagtaagataaagcaggagacagaggctggagat
gtgtgtgaaagaataaaagaaggaaaggaaggaggcagaggaatgggagatggaggaaca
gaccaggtccctaaatgttttagcataaatggcactttctcatctgaagcaaaagaaata
caggtgccagggacagtccgaacagcccccacggtagtgacaaatgttgttagacctgta
actagtgcccccattgcaatagccagcaagcctgctgaagggggcatgtctcttggggct
ccataccctgatgagaagcccaaacttttgattggtgggggagcagcagcaggaattggg
gccaaacctgttgggcaaggcggtttagtcacaggtttagtacttggaggagcgtttccg
aacccacccactgttcgactcataaccccgccccaacctttgccaggccccaccactagc
aatggagttcctaacaacagcgctgtgccactccctctgcttcagccacagttcctccca
gcagcttcactcactccccctaccaatggcaaacaagtcacccaagtgcagtacatcctt
ccaactctaccagcaacagccacccgaaacagcccctcttcacagcagacccaccagtca
actggtgttcttgccctgcccactgccctgccagcacacttatcattgtctaatggattg
catgcagggtctgggccagggatgagatatgcctcagtgccagcagtgggaggggtcagc
acaggagcaagagcccggtctccagtcttacaaaacaagatgttggttcccatgacaaca
gtaagaccaggatccacacctccacagcccatttccctagtggctcagcctcttcctgtt
caaaatggggtgcagcctggaagtaagcttattcagattgccccaatgccagtggtccaa
actaatgtccagcctgcacgaacagtacattctgctgcctctttcccagtctctatggca
acagcaactgtcatggcctcaggtgtcacatctcctcagacagtgctgttgactccatct
gctacaaggattacatatgttcaatcaaccactggtgtcgctacccctttgtcattgggg
tccacaacagcagtctccacccctcaaagagcagtgccccctcacacacaagcatttttg
ccatctgccatggccacactgggcttcactgccattgcacctgctggtcctacattggtg
catccagtagtgacaggccagcctccactcttggctcaggttccatctcctagctgtttg
ccccagtcctcagcctcagaatcaagtcgacagctagtgactgctctttaccctggccca
agtgtcaccctggcgacaggagtggtttccatgacaaccacatctcaaaacgtgactaat
cctctgccagtgctgacatccccatcatcacctcatatgaagacatctgtggcatcagac
gtgcacttccattctcacacctacacagactcactgtctcaagtcactttgaagatggaa
agtcttaaaaggccagatgcagatacacacagagaagcagtgttatcaaacacatcaagc
cagatggaagaattaggacggcttgttagtccaactccacacctgcattcaggaagtaag
gcaggatcccccaaactgcccctgagcccgcagaagatcaaagctcaagttgaatatcct
tcatcaagacaagaaggggaagagcaagatggaaagaaggcaagcacaatggagcatgac
agtgagagagacggtggaggaatggggtctatttggatagagaaagcagtgagggagagg
ggaacagaaggagctcccaaaagcccgttaactaataacaaggaggaacatgggagagag
gctggacaaaaagaggtggacctgcctcctccaccaatgcaaactgacactccagcactc
aagaagaataaatcccgccccccaccactcaaaagcaccactggctctgtggacaaagtg
atgtcaggcacatatttcgaggagcgcttagctgagctgccagagtttaagccagatgat
gcattgccctcccccagcttgcaaaacctggccacatctccccgtgcaattctcggcagc
taccgcaagaagaggaattcaacagatttggactctattgatgaccccagctctccaagg
aggaagagtcgtcgcttatcgagttgtagctcagaacccaacacacccaagagtgctgca
aagtgtgagggagacatattcacctttgatcgaactgcaggagagactgaggacatttta
ggtgagctggaccgtgtaccatactctcttcgccgcactttggatcagcgccgggcactt
gtcatgcagctttttcaggaacaaggctctttcttcccatcagcccaggccacagttgct
ttccaggcccgctactctgatactttccccactaaagtgtgtttgcaactgaagattcgt
gaagtgaggcagaagatcatgcagactgccacacctggtagttcagaggccacagtgatg
ggaggacctttcagtggttcagattctgcttgtgcaccaggaccatccaatcctgtaact
ggtgaagatggtgtggccagggtagatgaaaagggctgtgagtgggaaaagcccaagcct
ggcatggatgaatcacaggatcttagatga
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integrated database retrieval system
