KEGG   Neoarius graeffei (lesser salmon catfish): 132870949
Entry
132870949         CDS       T10798                                 
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132870949 (arid1ab)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ngra03000]
    132870949 (arid1ab)
   03021 Transcription machinery [BR:ngra03021]
    132870949 (arid1ab)
   03036 Chromosome and associated proteins [BR:ngra03036]
    132870949 (arid1ab)
Transcription factors [BR:ngra03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    132870949 (arid1ab)
Transcription machinery [BR:ngra03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     132870949 (arid1ab)
Chromosome and associated proteins [BR:ngra03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    132870949 (arid1ab)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 132870949
NCBI-ProteinID: XP_060760957
LinkDB
Position
22:complement(54717733..54898104)
AA seq 2236 aa
MAAQVAALSSTSPAAAAELKKPQEEEEEEEDSIPADTQQEKREQKELQDGTEVITNVRGG
GGGGGGGDPDMKNGNDNSSRMNNNNNQNDLDANSHPGIAHHHPAAFPPPPYGCSQHYTRG
PFHQHGGQQSPGMAPVLPGAVIEPYPGNSHDHGFSNHYNNYGPFPNRTQYQGQGFGMSSP
RTNTAGQPAKQPAAGTLMAGAFNNQRYNMSNPQPSPTPTLNQLLTSPSASRGYPGYPQGD
YSSPDGPGKGPGDMGSTNHYAAPWQQRGHHAPPMSPGNAPHALNRNQTPSPMDQVGKIRG
QHYGAANPYSQQQGPPPGAQQGPSYPGQGYGSPGPQRYPMGMQGRTPGAMGGMQYGQQMG
YGQQGPGAYGQSQGGYYGQQNPLAPHGGLQQGSYPQQHSSGPGSQHPYSQPPSGPPLSQG
GPSYSQQSQGQSSYPQPPHSQAGQPPYPQSQGTPQSAQGPQQQSGFPQAPPGSGQPLPPS
QQQQQQQQQGASQQQQQQQPSVGPPPQSQQPMGHGPPPQGHQPSPYSQTPPTQPQQQTPF
ERFPPPQQELSQDSFSSHASGPTSNQPMASSKSGTEDSMQGRPSSLPDLGSIDDLPTGTE
GALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHVPGIRGPSPSPVGSPASATPSRTGPL
SPAGNQMPPRPSSVQSDGILHSSINQSAVAQDRVYMRNTQLPAYGSPQPASALSPRPSSG
GQVHAGMAHYPQNNSLGNYGPQGGQYVPQGYPRQQGYAGMPGANYPGGPGMGSPMNPMSG
QGGGSAYSGMPPGRMGPGQMGSRPYGPGMSPNMAGIPPQVASGMCPPPGMNRKPQDPTSA
GMHHGPSNSIHRPPGYPSMTQGMMGAGSPYVPPMNSMHGIMNQAGPYPMGGNVANNSAGM
APSPEFGMDKLNQNQKMNNKVDGTPKTESKKKSNSSTTTNEKITRLYELGAEPERKMWVD
RYLAFAEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTS
SSAASSLKKQYIQCLYAFECKIERGEDPPPDIFNNDPKKNQAKVQPPSPAGSGSLQGPQT
PQSTSSSMTEGNDLKPPTPASTPHSQMPPMPGVRSSVNVQDPFADGGDPAFARRNSLTPN
SSFQPGMGGPDIMGRLGPYEPNKDPFGGMRKAGEQFMNPGQGPSSGMSEQYNRGPPGPIS
NMQLGHRQQYGPFGPGYDRRQEPGLSPDGSIGPGAPQTNALPSGADSGMYSPNPQQQRHD
SYVNQYPGQSAPPSGQYPNQQPGIYPQQANYTQKRPGDGGYCPPAKRHEGEMYSFTGQQQ
QGPQPSGGPQPQQDLYSQYNAYPGTDRRPPGPQGQFPFGFVRDRGPNAGGSNSQSSVPPQ
MMGSPLPSVPDGPQGPMWQGRNDLNYPNYPSRQGPPGVPAPGPGYHAMNRSEDMLPSDQR
MNHEGPWPGHVNQRQPPYGSGGSGPPMSRTLQSNFQSSQNHIPQVSSPAPMPRTMENSPS
PSKSPFMHTGIKNQKAVPLVPASHAAPPPVQPPVIRRDVAFPSGSVEATQPILKPRRRLM
MKDIGTPEAWRVMMSLKSGLLAESTWALDTISILLYDDNSISTFSLCQLPGFLELIVEYF
RRCLIEIFGILKEYEVGDPGQRTLIDPDAPDTDMSDEESLEVGQVDEEEDKEEQSSQHAS
QIQVKHENDELMHDQKSSEKSEEEKNGESSSSREHELSAPLQDSGAVQEKLKQGSKFDKL
PIKVVWKKDPFVIGRTSKLGRRQTFDSGLIHWSVGGGDTTEHIQTHFETKMELLKLHKRV
PVNTEVPPIADLVTENRNKDEKSIPHQQNEQQPESQTSSGQPLENENTTAVASASTTIMA
TVDDVLSGWSGAVPEESVRNDIENEEKNKFLFGIDPSQQINSIKILEDEPYSKDESPLCI
LSEWQDALARRCICVSNIVRSLSFIPGNDSEMSKHPGLLLILGRVVLLHHRHPERKEAPV
TYEKEEEEEGGVNCERGEWWWDCLEVLRENCLVTLANISGQLDLSMYPESICLPLLDGLL
HWAVCPSAEAIDPFPTLGLNGAVSPQRMVLETLSKLSIQDNNVDLILATPPFSRLEKFYS
SLVRLIGDRKVPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSIAATQFQ
QSQASLLHMQGPHFEPTSVDMMRRAARALHALAKVEENHSEFMLYESRLLDVSVSPLLNS
GVSHMICDVLFLIGQS
NT seq 6711 nt   +upstreamnt  +downstreamnt
atggccgctcaggtcgctgcgctgagcagcacgagccccgccgccgccgccgagctgaag
aagccgcaggaggaggaggaggaggaggaggactccataccggccgacacgcagcaggaa
aagcgcgagcagaaagagctccaggacggcaccgaggtgatcacgaatgtccgtggagga
ggaggaggaggaggaggtggagaccctgacatgaagaacggcaacgacaattcatcccgg
atgaacaataataacaaccagaacgatctagacgcgaacagtcacccgggcatcgctcat
caccacccggccgccttccctccaccgccgtacggctgcagccagcactacacccggggc
ccttttcatcaacatggcggacaacaaagccctggcatggcaccggtgctcccgggcgct
gtgatcgagccttacccgggcaactcgcacgaccacggcttctccaaccactacaacaac
tacgggccgttcccaaaccggactcagtaccagggccaggggttcggcatgagctccccg
cgcaccaacaccgccggccagccggccaagcagccggcagcaggaactctcatggcgggt
gcctttaacaaccagaggtataacatgagcaaccctcagcccagcccgaccccgacttta
aaccagctcctgacctcccccagcgcctcccggggctacccgggctacccgcagggcgac
tacagcagcccggacgggccggggaaagggcccggggacatgggcagcaccaatcactac
gcagcgccatggcaacaaagaggccatcacgcgccccccatgagcccggggaacgccccg
cacgcgctcaacaggaaccagaccccaagcccaatggaccaggtggggaagatcaggggc
cagcattatggagcagcaaacccttactctcagcagcaggggcctccaccgggggcccag
caagggccctcctaccctgggcaaggctacggttccccagggccacagagatacccaatg
ggcatgcaagggcggactcctggtgctatgggaggcatgcagtacgggcagcagatgggt
tatggacagcaaggcccaggagcttatggccagagccaaggaggctactacggtcagcag
aaccctcttgctccccatggaggccttcagcagggttcgtaccctcagcagcattccagt
ggcccaggctcccagcatccgtactcccaacctccatcaggtcctcctctgtctcagggt
gggccttcttactcccagcagtcccagggccaatcttcatacccccaacctccacattcc
caggctggccagccaccttatcctcagtcccagggtacacctcagtcagctcagggccct
cagcagcagtccggattcccccaagcaccgcctggttctgggcagcctcttcctccatct
cagcagcagcagcagcagcagcagcaaggtgcatctcagcagcagcagcagcagcagccc
agtgtagggcctcctccgcagtcccagcagccaatgggtcacggtcctcctccacagggg
caccagccctcaccctattcacaaactccgccaacgcagcctcagcagcagacgcccttc
gagcgcttcccacctccgcagcaggagctgtcccaagactccttcagttcccatgcttcc
ggtcctacctcgaaccagcccatggcctccagtaagagtggtacagaggacagcatgcaa
ggccgtccttcaagtctgccggacctgggctcgatcgatgacctgcccacaggcacggag
ggtgcgctgagtccaggggtcagcacatctggtgtctccagcagtcagggcgagcagagc
aacccggctcagtcgccgttctccccgcacacctcgcctcacgtgccgggcatccgtggg
ccttccccatcacctgtgggctcgcccgccagtgccacgccttctcgcactggacccctg
tcacctgcaggaaatcagatgcctcccagaccttccagtgttcagtcagatggaattttg
cattcttccataaaccagtctgctgtggctcaggacagagtctacatgcggaacacacag
ttgcctgcctacggctcacctcagcctgcttctgccttatcgccacgaccgtcatctgga
ggccaagtgcatgctgggatggctcattatcctcagaacaactctctgggcaattacggg
ccacagggcgggcagtacgttcctcagggctacccgaggcagcaaggctatgctggcatg
cctggtgctaactatcctggtggtccaggcatgggcagcccgatgaatcccatgtcaggg
cagggaggaggcagtgcatatagtggtatgcctcctgggcgcatgggtccaggacagatg
ggctcaaggccgtatggtcctggaatgagtcccaacatggctggtataccacctcaagtg
gcttcagggatgtgccctccacctggcatgaacagaaaaccccaagatccaacctcagca
gggatgcaccatggtccatctaactccatacacaggcctcctggttatcccagtatgacc
caggggatgatgggagctggttctccgtatgtgccgcctatgaacagcatgcatgggata
atgaaccaggcagggccgtaccccatgggtggtaacgtggccaacaactctgcaggtatg
gctcccagcccagagtttggcatggataaacttaaccaaaaccagaagatgaataataaa
gttgatgggactcctaaaacagaatcgaaaaagaagtcaaattcgtccaccacaacaaat
gagaaaataactcggctatatgagttgggtgccgagccagagaggaagatgtgggtggac
cgttacctggcctttgctgaggagaaagccatgggcatgaccaacctcccggcggtgggc
cgtaagcctctcgacctctttcgtctctatgtgtcagttaaagagattgggggccttaca
caggtgaataagaataaaaagtggagggagttggcgacaaacctgaatgttgggacctcc
agtagtgcagctagttcactaaagaagcaatacattcagtgtctgtatgccttcgagtgc
aagattgagcgtggtgaggacccacctcctgatattttcaacaatgaccccaaaaagaac
caggcgaaggtacagccaccctctccagcgggctctggatcattacagggcccccagact
ccacagtcaactagtagctccatgactgaaggaaatgatctgaagccccctacccctgca
tcaacaccccacagccagatgccccctatgcctggtgtgcggagcagtgtgaacgttcaa
gacccctttgctgatggaggagaccctgcctttgctagacggaactcactgacgcctaac
tctagcttccagcccgggatggggggcccagatataatgggtcgtttaggtccttatgag
ccaaataaggacccttttggtggtatgaggaaagcaggtgagcagttcatgaatccggga
caaggccccagcagtggaatgagtgaacaatataaccgaggccctccaggacctatcagt
aacatgcagttaggtcacagacaacagtacggaccttttggaccaggatatgaccgaaga
caagagccaggtctgagtccagatggcagtataggtcctggagccccacaaacgaacgcc
ttgccgtctggtgcggactcggggatgtattcacctaatccgcagcagcaaaggcatgat
tcctatgttaatcagtaccctggccaaagtgcaccacctagtggacaatacccaaatcag
cagcctggaatctacccacagcaggcgaattacacacagaagaggcctggagatggaggt
tattgtcctccagcaaagcgtcatgagggggaaatgtattcattcactggccagcagcaa
caaggccctcagccctcaggtggacctcaaccccagcaggacctgtacagccagtataat
gcctaccctggtacagaccgacgtccacctggtccacagggtcagttcccgtttggtttt
gtacgggacagggggcctaatgccggaggctctaactctcagtcctccgtgccaccacag
atgatgggcagccctttgccatctgtccctgatgggcctcaaggtcccatgtggcaaggc
agaaatgacctaaactatcccaactatcccagtcgtcagggacctcccggagttcccgct
ccgggtccagggtaccatgccatgaaccgttctgaagacatgttgccttcagaccagcga
atgaatcatgaaggtccatggcctggtcatgtcaaccagagacagcctccttatggatct
ggtggttctggcccacccatgtctagaacactacaatccaattttcagtcctctcagaat
cacattccacaggtatcaagtccagcacccatgccaagaaccatggagaacagtccatca
cccagcaagtccccttttatgcacactgggataaaaaatcagaaagctgtacctctagtc
ccagcctcacacgcagctcccccgccagtacagcctcccgtgatcaggagagatgtggcc
tttccttcaggatctgtagaggcgacgcagcccatcctcaaaccacgccgccgactcatg
atgaaagatattggaacgccggaagcctggagagtcatgatgtctctcaaatcaggattg
ctggcagagagcacttgggccttggacaccatcagtattcttctatatgacgataatagc
atttctaccttcagtctgtgtcagcttcctggcttccttgaactgatagttgagtacttc
cgaagatgcctcattgaaatttttggcatcttgaaagaatacgaggttggagatcctggg
cagcggacactgattgacccagatgctcccgacactgatatgtctgatgaagaaagcctg
gaagtagggcaggtggatgaagaagaggataaagaggagcagagcagtcaacacgcatca
cagatccaagtcaagcatgagaatgatgagcttatgcatgaccagaaatccagtgaaaag
tctgaagaagagaagaatggagaaagctcttcatctagagagcatgagttatctgctccc
ttacaagacagtggtgcagtacaggaaaagcttaaacagggtagcaaatttgacaagctt
cccattaaggtagtgtggaagaaagacccatttgtcattggtcgcaccagcaagttgggc
cggagacagacttttgacagtgggctgattcattggagtgttggtggaggtgacaccacg
gagcacatccaaactcactttgagaccaagatggagctgctaaaacttcacaaacgggtg
cctgtcaatactgaggtacctcccatagcagacctggtcactgagaacagaaataaggat
gaaaagagcataccacaccagcaaaatgagcagcaaccagagtctcagacttcctcaggc
caaccattggagaatgagaacaccacagctgttgccagtgcatctactaccattatggcc
actgttgacgacgtgctctctggctggtcgggagcagtgcctgaagaatctgtgcggaat
gacattgagaacgaggagaagaacaagttcctgtttggtattgacccttcacagcaaatc
aacagcattaaaatccttgaggatgagccatacagcaaggatgagtccccattgtgcata
ttgtcagaatggcaggacgcgttagcccgccgctgcatatgcgtctctaacatcgtccgg
agtctatcctttatccccggcaatgacagtgaaatgtccaaacacccaggcctgctgcta
atactgggccgtgtggtgctcctgcaccaccggcatcctgagcgcaaggaggctcctgtc
acctatgagaaagaggaagaggaggaaggaggagtcaattgtgagcgaggtgaatggtgg
tgggactgtctggaggttctgcgagaaaactgtctggtcacgttggccaacatatcaggc
cagttggacctgtccatgtaccccgagagtatctgcctaccactgctggatggtcttctc
cactgggctgtctgcccctcagcagaagccattgatcccttcccaacactggggcttaat
ggtgctgtttcccctcagagaatggttcttgagacccttagcaagctcagcatccaggac
aataatgttgacctcattctagccacgccacccttcagtcgcctggagaaattctatagt
tcactggtacgcttaattggtgaccgtaaggtacccgtgtgccgggagatggcagtggtg
ctgttagccaacctggcccagggtgacagcctggcagctcgggccattgctgtgcagaaa
ggcagtatagggaacctcctggggtttctggaggacagtatagcagccacacagttccag
cagagtcaagcttcactgctgcatatgcagggaccacactttgaacccactagcgtggac
atgatgcggcgggctgcccgcgccctgcatgccctcgccaaagtagaggagaaccactcc
gagtttatgttgtatgagtcacggctactggacgtctctgtatcccccctcctgaactca
ggagtgtcccacatgatctgtgatgtactgtttctgattggccagtcatga

DBGET integrated database retrieval system