Neoarius graeffei (lesser salmon catfish): 132870954
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Entry
132870954 CDS
T10798
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngra01009
]
132870954 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132870954 (ctdp1)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132870954 (ctdp1)
Protein phosphatases and associated proteins [BR:
ngra01009
]
HAD phosphatases
Fcp/Scp phosphatases
132870954 (ctdp1)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132870954 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
Biotin_lipoyl
PTCB-BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
132870954
NCBI-ProteinID:
XP_060760967
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All DBs
Position
22:55495295..55581976
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AA seq
916 aa
AA seq
DB search
MEVTEIRLPAGARAVRLREWKVEPGALVKVDSVVALCVAVPTDTESGSEQPKRRLLEKKV
KSDRAGVVRELCSQLGEVISPGDVIARIEECSHPIVMKGLCAECGQDLTQLQNRNGKQQN
PISTAMVSMVHSVPELMVSSEQAEQLGREDQKRLHRNRKLVLMVDLDQTLIHTTEQHCQR
MSTKGIFHFQLGRGEPMLHTRLRPYCKEFLEKISKMYELHVFTFGSRLYAHTIADFLDPE
KKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYF
KGTGDINAPPGSREAQLAKKSAGSLSSQPVETTNPSGSSANGGKNNGLQKQDKDKKLDET
SVCVPDVQGASASQRTYPDGKRTEKSQSSNKSDIKLEESGDVDKMRQSSETVDQENGTVA
DGDDSAKPESPHNKNDQLSETIKLKQAEECCSTKENGDGHGVDTDSICDLDDEESFGDNG
CSDKKETETESQNSEQSGVTMGEESLDHSMVDEEEEDEEDTDKDDHLIYLQEILMRIHNE
YYSRYEAYLRGDCSEMPDIRKIVPELKSSSLAGTNIVFSGLYPTNYPMERTRESYHAKAL
GAKIGKRLVLNPKDPNCTTHLIAARAGTEKVRQAQACKHLHIVNPDWLWGCLERWDRVEE
QLFPLKDDYTKSQRSNSPSSIPDVPESFPAPVIHPVSIQPKGLLAPEVHTYDSVTGKLIR
RGPQAPRLTQKSSVALPGHEVHFRDLRFLQQEDAESSRADDEQPAASRRKRQPSLSETMP
LYTLCKEDLDSMDREVDDILGEESDNDSEGKEKEEKMEGEDEDEESSRQSAETTDYQRSL
DTSVKTTSSASKEHGSRTASAPRSHKRKLQDTRDDDDDDKDGDVTSQSSKESNEDGSSSE
ADEMAAALEAELNDFM
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacggagatccggctgccggcgggagcgcgcgctgtgcggctgcgggagtgg
aaggtggagcccggggcgctggttaaggtggactcggtggtcgcgctgtgtgtggcggtt
cccaccgacaccgagtccggctcggagcagcccaagaggcgcttgctggagaagaaggtg
aagtctgaccgcgccggagtggtgagggagctgtgctctcagctcggagaggtcatatct
cccggggatgttatagcacggatagaagaatgcagccaccccattgtgatgaagggtctg
tgtgcagagtgtggtcaagacttaactcagctgcagaacaggaacggcaaacagcagaac
cccatctctacagccatggtttccatggtgcacagtgttccagagctgatggtcagctcg
gagcaagcagagcagcttggccgagaagaccagaagaggctccacagaaacaggaagctg
gttctcatggtggatctggaccagactctaatccacaccacagagcagcactgtcagcgc
atgtctaccaaaggaatttttcatttccaactggggagaggcgagcccatgctgcacacg
cggctcaggccttactgcaaggagtttctggagaagatttccaagatgtacgaactgcat
gtgttcactttcggaagtcgcctctatgcacacaccattgcagacttcttggaccccgaa
aagaaacttttctcacatcgaatcctgtctcgagatgagtgcatcgacccgttttccaag
acaggaaatctgaggaatctgttcccatgtggcgattccatggtgtgcatcattgacgat
cgagaggatgtgtggaagtttgctccgaacctcattacagtgaaaaaatatgtctacttc
aaaggaacgggtgacatcaatgccccacccgggtcccgagaagcccagctggcaaaaaaa
agtgcaggtagcctatctagtcaacctgtcgagaccactaacccttctggatcatcagcc
aatggggggaagaataacggcctccagaaacaagacaaggataaaaagcttgacgaaaca
tcagtctgtgtcccggacgttcaaggagcatcagcgagccagagaacatatcctgatgga
aagaggacggaaaagtcgcaatcgagtaataagtctgatattaaattagaagagtcgggt
gacgtggacaagatgaggcagtcaagtgaaactgttgaccaggagaacggaactgtagct
gacggcgatgactcggctaaaccggaatcaccacataataaaaatgaccagctctcagaa
accataaaacttaaacaagctgaagagtgctgcagtacaaaggagaatggagatggacac
ggagtagacacggacagtatctgtgatctggatgacgaagagagttttggtgataacgga
tgttctgacaagaaggaaaccgagacggagtctcaaaacagcgagcagtcaggggtcacc
atgggagaggagtctttagaccacagcatggtggatgaagaagaggaggatgaggaagac
acggacaaggatgatcatttgatttaccttcaagagatcttgatgcgtattcataatgag
tattactcgcgctacgaggcttacctgcggggcgactgctcggagatgccagacatccgt
aaaattgtccctgagctgaagagcagttccctggctggcaccaacatcgtgttcagtgga
ttgtacccaacaaactaccccatggagcgaacacgagagagctaccatgcaaaagcactg
ggggccaagattggcaagagacttgtgctcaatcccaaagatcccaactgcaccacccac
ttgattgccgcgcgtgcaggtacggagaaggtccggcaggcccaggcctgtaagcatctg
cacatagtgaatccggattggctttggggatgcttggagcggtgggacagagtggaagag
cagctgttcccacttaaggatgactacacaaaatcacagagaagtaatagcccatcatca
attcctgatgttccagagtccttcccagcacctgttattcaccctgtttccatccagccc
aaaggccttctggctcctgaggtgcacacatatgattctgtaactgggaagttgatccga
agaggccctcaagcgccacgtctcacccaaaaatcatctgtggcgctgcctggacatgaa
gtgcactttagggatttaagatttctgcaacaggaagatgctgaaagctcaagagcagat
gatgagcagcctgcagcatcacgcaggaaacgccagccaagcctgtctgaaaccatgcct
ctttacacgctctgtaaggaggacctcgatagtatggacagagaggtggatgatattctt
ggagaagaaagtgataatgatagtgagggaaaagagaaggaagagaaaatggagggagaa
gacgaagatgaggagagcagcaggcaaagtgctgaaacgacagattaccaacggtccctg
gacacatctgtcaaaaccacatcatcagcatccaaagaacatggcagtcggactgcgagt
gcgccaagaagccacaagagaaaactgcaggacaccagagatgatgatgatgacgacaaa
gacggagatgtgaccagccagtccagtaaggagtcgaacgaggatggcagtagctccgaa
gcagatgagatggctgctgccctggaggcagagttaaacgacttcatgtga
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