Neoarius graeffei (lesser salmon catfish): 132871390
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Entry
132871390 CDS
T10798
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132871390
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132871390
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132871390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-RING_2
Torus
zf-CCCH_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-CCCH_3
zf-RING_UBOX
RING_XB3-XBAT31
zf-CCCH_DUS3L
IBR_1
zf-UDP
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-CCCH_PARP12
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
132871390
NCBI-ProteinID:
XP_060761493
LinkDB
All DBs
Position
23:<60504672..60505642
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AA seq
274 aa
AA seq
DB search
FNKGLLAEDHRVRNGICRQFVNGSCRFGPHCSYLHEYPAVPLVQVCRYFQKGGCWFGENC
RYLHIAGPDSGASGARHGSAPVVNAASDEATVNAASDVQEKTDSKTNQQGVPLLESGATV
SVTQGQSEAYNQSKDVVCGICMDKVYEKGTVQERRFGILPNCSHAFCLGCIMTWXKTKDF
QEEVIKACPQCRVKSPFYIPSKYWVCEGEPKEALIDSFKERLHCVGGHFYTPRLLSPLYV
ADGCIGQRAGGCFVPGGQGGGPPSLVHQQEAVGA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
tttaacaaagggttattggcagaagaccacagagtgcgtaatggtatttgtaggcagttt
gtaaacggctcatgcaggtttggtccacactgctcttatctgcatgaatatcctgccgtg
cctttagttcaggtgtgcaggtacttccagaaaggaggctgctggtttggcgagaactgc
aggtatcttcatattgctggaccagacagtggcgcttctggtgccaggcatggttcggca
cctgtagttaatgctgcatctgatgaggctacagttaatgctgcatctgatgttcaagag
aaaactgattctaaaacaaaccagcagggagtcccactgttggagagtggtgcaacagtt
tcagttactcagggacaatctgaggcctacaatcaaagcaaagatgtcgtctgtggaatc
tgcatggacaaggtttatgaaaagggcaccgtgcaagagaggcgctttggaatcctgccc
aactgcagtcatgccttctgtctcggctgcatcatgacctggtgaaaaaccaaagacttt
caggaagaggttatcaaagcctgtccacagtgtcgagtcaagtcccctttttacattccc
agtaagtactgggtttgtgagggggagccaaaggaagcactaattgattcatttaaagaa
aggctgcactgtgtggggggccacttttacactccccgacttctctctcccctttatgtt
gcagacggatgcatcggacagagggctgggggctgttttgtcccaggaggtcaaggggga
ggaccgcccagtcttgtacatcagcaggaagctgtcggtgcgtga
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