| Entry |
|
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| Symbol |
atm
|
|---|
| Name |
(RefSeq) serine-protein kinase ATM
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|---|
| KO |
|
|---|
| Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ngra00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132871522 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
132871522 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132871522 (atm)
04210 Apoptosis
132871522 (atm)
04115 p53 signaling pathway
132871522 (atm)
04218 Cellular senescence
132871522 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:ngra01001]
132871522 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ngra03032]
132871522 (atm)
03036 Chromosome and associated proteins [BR:ngra03036]
132871522 (atm)
03400 DNA repair and recombination proteins [BR:ngra03400]
132871522 (atm)
Enzymes [BR:ngra01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132871522 (atm)
Protein kinases [BR:ngra01001]
Serine/threonine kinases: Other
PIKK family [OT]
132871522 (atm)
DNA replication proteins [BR:ngra03032]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132871522 (atm)
Chromosome and associated proteins [BR:ngra03036]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
132871522 (atm)
DNA repair and recombination proteins [BR:ngra03400]
Eukaryotic type
Check point factors
Other check point factors
132871522 (atm)
|
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
23:9972665..10231073
|
|---|
| AA seq |
3083 aa
MSLRLNELLLCCRGLDNDKATERKKEVDRLRRLLRDPETVRELDSVSNGALKGSSHLTWD
AVFRFLKRYLQKETELLKSSKANVSAATRTNRQKKMQEISSLIKFFVRCANKRGSKLKCA
DLLNHVVEVLHSSFTCAAYGADYSSILLKDILCVRKYWCEITQQQWHQLLEVYCNLFTEP
KSINRVSVSRIIHTVVRGCCLQTDGLSHTLFSFFSTALSNIRTERQLQVLEHLISALNVF
LRSVAMNRRWRVCRLGEELLSSLLCVWSQMRPSSSLKEEMVEFFNMQLSVHHPKGAKTLE
TGAHAEDWVKWQSLLYSLYDALVGEISQIGSRGKYATGSRHIAVKENLIELTADICHQLF
SQDLRVVLRDGTQSSKRRRRMEIGWETLRDHLQPHHSDFDMIPWLQVTAALASKYPSMLP
AHELAPLLSLLCQLLGEQQRRGERGPYVLRCLKQVALCQAKISGKSQALLAEVGRIWARV
WMLAVRGVSSAHTEPLCLELLQTLVQCHLVPVDREFWKLFSGGMCKPSVVSVRSLAQALL
ECSIPKSVYSSECLSPALLDAGTPPSLKEAIIDWLLMNEQSDEMEESVRLHPIICRNFPL
NLIPMILVVLTLKDTMAGMAFLMSSLQPECISALDRPAVMEARTQLNEIETLYLQVSFDD
VALQCAVKEDGIRTCREKPQLTVIDSLRTRVEQSLQAIADHLLNSYSPDNPNTSPAAMVC
CLRLLTGTLGAFVCVGVLTEENACHTPLFQKAKTVAQDFSEYISSTKSKLSEDETLSALK
SVMLLYSESISTKNQDSVSTISHSLVMKALPARLLSELSEICKLMLGNSAKRDSTGVDND
PDDMDVSRTQMEENPQEEVDLFDDGDRAHHNNNGTQMLNADLADSQHGLGAKSPLSQDHL
TKQDLTFLDILEFLSLCASFEPSTGLTFKPLDLRRKLLKLLDLMDCAKPLHLHMYLVLLK
VLPAERRSLTAEEFDLLLKPLADICSQYRQDQEMCCAILLALLPCVRCLRGLRCLPEQDE
EMDHVRGALLQVVSGFCILGKSGRCTSAVRAALGRCLLALMEVDPCCEWVILSVKGEELP
AYVVLPSHLADLHHHVRMQAAMNVERLFLEKVVCDGEQKKMLPVKHQQTAFENIYLKAQE
GMKIQRNGSPEDLADETFNRRATLLKSLSMVMCCSPVCEKQALFALIQSYKENSIEENLI
KKVLTSVSLSLGYRSSEAFVCSHLNYLVAEWLSQGQTEASYTLQSFPYWLLNCSSLEEFY
RSWYHVLIPHLIFLNDFEQVKLIGSHLKQDWRQLVANCFPKIMVNILPHFALPGHDTEAA
KQREKAHHVYDLLKDDQCLGKQQIDSLICGNLADIVVELLMTLYEGVGSGTADRGDLQKF
IGELDPAPNPPFFSSHVIKATLDYLSKCHSTGHKCLVAILSKTPMSIQKILTSVCQRAAE
TTNAYERHRILMMYHLFVNLLLCEVKDGLGGAWAFVLQDIIYTLIHHINSRSGPQDEVSA
RSLALCCDLLTTVCKTAIRFCDDALESHLQVIVGTLTAQVTEQPAISQQVLSLLKFLVIE
NPDNQYLRRAIPLLEPFPDQPAFVELRAAQHALKYSSGAFTLRQEIEHFLSVTSCDSLPL
TRMEGLKDLKRQLHNHKQQIEQLLKECHADPASSVLVKLVLNLLQLCKLAANHPGGRDIL
EAVGGCLGELGPVDLSTIALHHGKDQIYAQASALYPDVLHQWVFIILSCMNNALTDQSIS
IRQAAAVCLKDILATQSGLDFWEMHKSQRDPMLLYLSPFRSAKKKELTVRPEVTLVSRDR
VDNVELWSVQPGKHKEWLRNLCMALLDSGGVCNEALLMTRALCEVKTDFCQKMLPLFIHD
MLLGDTHGSWRELLSTHIQCFFSSFCRQGISGSRPTTPMPSDSADTDVGVQSQTDKSSLR
TMLAVIDYLRQQRRPLGPNSAGCGTVCESNFWLDLNYLEVARAAQLCSAHFTALLYSEIY
VDNIRNSMEEKHRAQSRISRRITFDDSSQNLSIGSMSETSIEDSGMSLQDILIEVYRSIG
EPDSLYGCGGGKLINPLTRIRTYEHEAMWGKALASYDLHANLPEVTRQVGIMESLQNLGL
CGILNTYLHGLRRHGAEWAPALREFHFQAAWRNTQWETDVDERSEKLNPGFNESMFTALQ
ALKDKDCFMFEQTLKYTRGSVVEELCRGSLEAVSSLYPALRSLQMIEEIQSVKQLFREFS
QLDVFRKWHQHLDLLTDSDFSLVEPILALRSSIQETLLKCETDPDRKSFLSSTYSSHLME
LCRLARAAGNTQLAERALFQMKQQNSVASVSTATSWAWQLEEVQVFWVKKEQELALGLLK
QMIDKLEDLVDVNPAVVPVYAECLRLCGSWLAETCLESPAGILETYLERAVTVGRGGSSE
PKLQRQKTQAFLSLARFSDLQYESIKNYMRSSEFENKRALLEKAREEVELMKERKVTDNR
YTVKVQRELKLDVRALDNLKADRRRFLLKAVENYTHCLALGEEHDTWVFRLASLWLENVD
TKDVNELMKEGVKKIPSYKFLPLMYQLAARMGTKVSNPVTSEEDVGFHTVLNELICRSSM
DHPHHTLFIILALVNANKDECFSRSRLSRSSAQQPSPLDLDRAEVAQKILNAIRKKKAQL
IRGIETLCNAYITLAYMDVHKHKTEKKAIPIPADQPIMQIKDLKDVIIPTMEIKVDPSGK
YEDLVTISCFKPHYHLAGGVNLPKIIDCVGSDGQSRRQLVKGQDDLRQDAVMQQVFQMCS
TLLQRNADTRRRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDTQKGAHKRFRPQDW
SSMACRKKMMDAQRMEFDVKLQAYMEVCQNFRPVFRYFCMERFLDPATWMEKRLAYTRSV
ATSSIVGYIVGLGDRHIQNILIDEKTAELVHIDLGVAFEQGKILPTPETVPFRLSRDIVD
GMGITGVEGVFRRCCEKTMEVMRSSQEVLLTIVEVLLYDPLFDWTMNPLKAFYLQQQDEQ
AELNATLNPTPAGEEPETHRKPSSDSQSFNKVAERVLLRLQEKLKGVEEGTVLSVGGQVN
LLIQQAMDPKNLSRLFPGWQAWV |
|---|
| NT seq |
9252 nt +upstreamnt +downstreamnt
atgagtctgcgactgaatgagctgctgctgtgctgccgaggactggataatgacaaggcc
acagagaggaagaaggaagttgatcgtctcaggaggcttcttcgggatcccgaaacagtg
cgggaactcgacagtgtgtccaacggagccttgaaagggagcagccatctcacctgggat
gctgtgttcaggttcttgaagcggtacctgcagaaagagacagagctcctgaagtcgagc
aaagcgaacgtctcggctgccactcggaccaaccggcaaaagaagatgcaggagatcagc
agcctgataaagttcttcgtccgatgtgccaacaaacgagggtcgaagttaaagtgtgca
gatctgctgaatcacgtggtggaggttctgcatagctcctttacttgtgctgcgtatgga
gcggactacagcagcatcctgctcaaggacatcctctgtgtccgcaagtactggtgtgag
attactcagcagcagtggcaccagctgctggaagtgtattgcaatcttttcactgaacct
aaatccataaaccgggtttcagtgagcaggatcattcacaccgtggttcggggatgctgc
cttcagactgacggcttgtcccacacactcttcagctttttctcaacagctctaagtaac
ataaggacagagagacagctgcaggtgctggagcacctgatctccgctctgaacgtgttc
ctgcgctctgtggcgatgaaccgcaggtggcgagtgtgcagactgggagaggagctgctt
tcttccctcctgtgcgtgtggagccagatgaggcccagctccagtctgaaagaggaaatg
gtggagttctttaacatgcagctcagcgtgcatcaccccaaaggagccaagacgctggag
acaggtgcccatgcagaagactgggtgaaatggcagagtctcctctacagcctgtacgat
gctctcgtaggcgagatcagccagattggcagtcgtggaaagtacgcgacgggttctcgt
catatcgctgtcaaagaaaacctgatcgaactgactgcagacatttgccaccagttgttt
agtcaggatttacgtgttgtgttgagagacggcacacagagcagcaagcggcgacggcga
atggagatcggttgggaaacactgagggatcacctacaaccccatcacagcgacttcgac
atgataccttggctacaggtgacagctgccctggcctccaagtacccctccatgcttcct
gcccatgagctggcccctctgctgtctctgctgtgccagctgctgggtgagcagcaacgt
cgaggagagaggggcccgtacgtgctgcgctgcctgaagcaggtggctctgtgccaggcc
aaaatctcaggaaaaagccaggctctgctggcggaagtaggccggatttgggccagagtg
tggatgctggcagtgcgaggcgtcagttctgcccacacggagcctctgtgcctcgagctg
ttacaaaccctggtgcagtgccacctcgtgcctgtcgacagagagttctggaagctcttc
tctggtggcatgtgtaaaccatctgttgtttcggtgcgcagcctcgcccaggccttgttg
gagtgttcgattccgaagagtgtgtacagcagtgagtgtttgtcacctgcgctgctggac
gccggcactccgccctctctgaaagaagcgatcattgactggcttcttatgaacgagcag
agtgatgagatggaggagagcgtcaggcttcacccaatcatctgcaggaattttcctcta
aatcttatcccgatgattctggtggttttgacgctgaaagataccatggcaggaatggcg
tttctgatgagttctctacaaccagagtgcatatctgctctggatcggcctgcagtaatg
gaagctagaacccagctgaacgaaatcgagaccctgtacctgcaggtcagttttgatgac
gtggccttacagtgcgcagtcaaagaagacggaattcgaacatgtagagaaaagcctcag
ctcactgtcatcgactctctcaggactcgagtggagcagagtctacaggctatagctgat
catctcctcaactcctactctcctgacaaccctaatacctcccctgcggctatggtgtgc
tgcttgaggctacttaccggtacccttggagcctttgtctgcgtcggagtccttactgag
gaaaacgcctgtcacactcctctgtttcagaaagcaaagactgtagcgcaggacttcagt
gaatacatttcctctacaaagtccaagttaagtgaagatgaaactctgtccgcgcttaaa
tctgtgatgctgttgtactcagaaagcatcagcacgaagaatcaagacagcgtttctaca
atctctcacagtttggtcatgaaggctctccccgctcgactgctcagtgagctgtcagaa
atctgcaagctaatgctgggtaactctgctaaaagagacagcacaggggttgataatgat
cccgatgacatggacgtgagcagaactcaaatggaggagaacccacaggaggaagtcgat
ctgtttgatgatggtgaccgtgcacaccacaacaacaacggaacgcagatgcttaatgct
gacttggccgattcccagcatggcttaggagcgaagagccctttatcacaggaccacttg
accaaacaggacctgaccttcctggacattctggagtttctttcactgtgcgcctcattt
gaacccagtaccggactcacctttaaaccactggaccttcgacgcaagctgctgaaactt
ttggatctgatggactgtgccaaaccgctgcatctccacatgtatctggttctgctgaag
gtgcttccggcagagaggaggtctctgacagccgaagagttcgatttgctcctcaaacct
cttgcggacatatgttcacagtatcgccaagatcaagagatgtgctgtgccatcctgcta
gctctgctgccatgtgtgcgctgcctgcgcgggctacggtgtcttcctgagcaggatgag
gagatggatcacgttcggggtgcactactgcaagtggtctcaggcttctgcatcctgggt
aaaagcggcagatgcacttcagctgtcagggcagcactgggacgctgtttactcgcctta
atggaggttgacccttgctgtgagtgggtgatcttatctgtgaaaggggaggagcttccg
gcatatgtggttttgccctcacaccttgcagacctccaccaccatgttcgcatgcaagca
gccatgaatgtagaaagattgttcttggagaaagtagtttgtgatggagagcagaagaag
atgctcccagtaaaacaccagcaaacagcctttgagaacatctacctaaaggcacaggag
gggatgaagatccagagaaacggatcccctgaagacctggctgatgagacctttaatcgc
agggcgacgctgctgaaaagcctgtccatggtgatgtgctgcagccctgtgtgtgagaag
caggccctctttgcgctcattcagtcctataaggagaacagcattgaggagaacctgatt
aaaaaggtgctgacgagcgtctctctttctctgggctacagaagctctgaggcgtttgtc
tgctctcatctgaattatctggtggctgaatggttgagccagggacagacggaagccagc
tacacgctacagtccttcccttactggcttttaaactgcagcagtctggaggagttttac
aggtcatggtatcatgttctgatcccacacttgatcttcctgaatgactttgagcaggtt
aaattgatcgggagtcacctgaagcaagactggaggcagcttgtggccaactgctttcct
aaaatcatggtgaacatcctgccccacttcgccctccctgggcacgacacagaggcagca
aagcagagagagaaagcacaccacgtttatgacctgctgaaggatgaccagtgcctggga
aaacagcaaatcgacagcctgatatgtggcaacctggcagacattgttgttgagctgttg
atgacgctgtatgagggtgtagggtcaggcactgctgacagaggagacctgcagaaattt
attggggagctggatcctgctccgaatccacctttcttcagctcacacgtgattaaagca
acactagattacctcagcaagtgtcatagcaccggtcacaagtgtctggtagccatactg
tccaagactccgatgtccatacagaagatcctgacctcggtttgtcagcgcgcagccgag
accaccaacgcctacgagaggcaccgcatcctcatgatgtatcacctgtttgtgaacctg
ctgctgtgtgaggttaaggatggcctgggcggagcctgggccttcgtgctccaagacatc
atctacacccttatacaccacatcaacagcaggtccggtccacaggacgaggtctctgcg
cgcagtctcgcgctgtgctgcgacctgctcaccaccgtatgcaaaacggccatccgcttc
tgcgacgatgctctcgagagccacctacaagtcattgtaggaactctcacagcgcaagtc
actgagcagccagctatatctcaacaggtgctgagtctgctcaagtttctggtgatcgaa
aacccagacaaccagtacctgaggagagcaattcctttgcttgagccgtttcctgaccaa
ccggccttcgtagagctccgagcggctcagcacgcactcaaatacagctctggagccttc
actctcagacaggaaattgagcatttcttgtctgtgacatcatgtgactcgttacctctt
acacgaatggagggcttaaaggatttaaagagacagttacacaatcacaaacagcagatt
gagcagctgctgaaagaatgtcatgctgatccagccagcagcgtgctggtcaagctggtg
ttgaacctcctgcagctgtgcaaactggcagccaaccatcctggaggcagagacatctta
gaggctgttggaggttgcttaggagaactcgggcctgtggacttgtctaccattgcgctg
catcatggcaaagatcagatttacgcccaggcatctgcactttatcctgatgttcttcat
cagtgggtcttcatcatcctcagctgtatgaacaacgcactgacggaccaaagtatttct
atccgccaggctgctgctgtgtgtttgaaggacattttggccactcaatctggcttggat
ttctgggagatgcacaagagccagagagacccgatgctgctttacctgagcccttttcgc
tcagcaaagaaaaaagagctgacggtgagaccggaggtgactttagtttccagagatcga
gtggacaatgtagagttgtggtcagtgcagcctggaaaacacaaagagtggctaaggaac
ctgtgcatggctctgctggacagtggaggggtctgcaacgaagccttgctcatgaccaga
gccctttgtgaggtgaaaacagatttctgccaaaagatgcttcccctcttcatccatgac
atgctgttgggagacacacatggctcatggagggaacttctctccacacacatccagtgc
ttcttcagcagcttctgcagacagggcatttccggcagccgacccaccacccccatgccc
tctgattcagcggacacagatgtcggagttcagtcccaaacagataaaagttctctgcgc
accatgttagcagtcatcgactacctcagacagcagagacgaccactgggacctaacagt
gctggatgtggaaccgtgtgcgagtccaacttctggctggatctgaactatctggaagtg
gctcgagccgcacagctctgctccgcccatttcaccgccctgctgtactccgagatctat
gtggacaacatccgcaacagcatggaggagaagcacagagctcaatccagaatatcacgc
cggatcacgtttgatgatagcagtcaaaacctgtccatcggcagtatgtctgagacgagt
attgaagactcgggcatgagcttgcaggacatcctgattgaggtgtacaggagcattggg
gagcctgatagcctgtatggatgtggaggtggcaagttgattaatcctctaacaagaatc
aggacatacgagcatgaggccatgtggggtaaggctctggcctcttatgaccttcacgcc
aatctcccagaggtgacgaggcaggttggcataatggagagtctgcagaatttagggctc
tgtgggatcctgaacacgtacctgcacggtctgagaagacacggggccgagtgggcaccg
gcgctccgagaatttcacttccaggcagcctggaggaacacgcagtgggaaacggacgtg
gacgagaggagtgagaaactgaatcctggcttcaacgagtccatgttcactgctctacaa
gcgctgaaggataaagactgcttcatgtttgagcaaacgttgaaatacaccagaggcagc
gtggttgaggagctctgtcgtggcagtctggaggccgtgtcctctctctatccagctcta
cgcagcttgcagatgatcgaggaaatccaaagtgtcaaacaacttttcagggaattcagc
caactggatgtctttaggaagtggcatcagcacttagacctgttgaccgacagtgacttc
agtctagttgagccaatcctggctctgcgttcatccattcaggagacactactcaaatgt
gagactgacccagacaggaagagcttcctgagctccacctactcctcacacctgatggag
ctgtgcagactggcgcgtgctgcaggcaacacacagctggcagagcgggcgctgtttcag
atgaagcagcagaacagtgtggcgagtgtgagcaccgctacttcctgggcatggcaactg
gaggaagtgcaagtgttttgggtgaagaaggagcaagaacttgctctgggattgctcaaa
cagatgatcgataaactggaagacctggtggatgtcaatcctgctgtggtgccagtgtac
gctgagtgtttgagactgtgtggcagctggctggctgagacgtgtttagagagtcctgct
ggaatactggaaacctacctggagcgagcggtgactgtaggccggggcggatcttcagaa
ccgaaactgcagaggcagaaaactcaggcgttcctctcgctcgcccgcttctctgattta
cagtatgaaagtatcaagaactacatgaggtcatcggagtttgagaacaaacgggcactg
ctggagaaggccagagaggaagtggagctcatgaaggagagaaaagtcactgataatagg
tacacagtgaaggtgcagagggagctgaagttggacgtccgtgctttggacaacctgaag
gccgaccgcaggcgtttcctactaaaggcggtggagaattacacacactgcctcgcactg
ggcgaagaacacgacacctgggtcttccgcctggcgtcactctggctggagaacgtcgat
acgaaggacgtcaacgagctgatgaaagaaggtgtaaaaaagatcccatcctacaagttc
ctgcctctcatgtaccagcttgctgcccgcatgggcaccaaagtgtccaacccagtcact
tcagaggaggatgttggattccatactgttctcaatgagctgatctgtaggtcatccatg
gatcaccctcatcacacgctcttcatcatcctcgctctggtcaacgccaacaaggacgaa
tgcttctcccgcagccgtctgtccaggagcagcgcacagcagccttcacctctggatctg
gacagagccgaagtggcacagaaaatcctcaatgcgataaggaagaagaaggcgcagctg
atccggggtattgaaaccctctgcaatgcctacatcacccttgcgtacatggatgtacac
aaacataaaactgagaagaaagcaatccccatcccagcagatcaaccaatcatgcagatt
aaagatctaaaggacgtcataatcccaacgatggagataaaggtggatccgtcagggaaa
tatgaggatctggtgaccatcagctgttttaaacctcactaccacctggctggaggcgtc
aacctgcccaagatcatcgactgcgtgggctcggacggtcagagcaggagacagctggtc
aaggggcaggatgatctgaggcaggatgcagtgatgcagcaggtatttcagatgtgctcc
acactgctgcagcgtaacgcggacacacgcaggaggaaactcaacattcgccgctacaag
gtggtgcctttctctcagaggagtggtgttctggagtggtgctctggtaccgtcccgatt
ggagagtttctagtggacactcagaagggagcacacaaacgttttcgtcctcaagactgg
agcagcatggcctgtcgcaaaaaaatgatggacgcacaaaggatggaatttgacgtgaag
ctgcaggcgtacatggaggtgtgccagaactttcgccctgttttccgttacttttgcatg
gagagattcctggacccggccacatggatggagaaaagactggcatatacacgcagcgta
gctacttcctctatagtgggctacatcgttggcctgggtgatcgacacatccagaacatt
ctgatagacgagaaaacagcagaactggtgcacatagaccttggtgttgccttcgagcaa
gggaagatcttgcctactccagagactgtacccttcaggctgtccagagacattgtagat
ggcatgggcatcaccggggtagagggagtcttcaggaggtgctgtgagaagaccatggag
gtcatgaggagttctcaggaggttctcttgaccatagtggaggttttgctgtatgatcct
ttgttcgactggacgatgaacccacttaaggctttctatctgcagcagcaggacgagcag
gctgaactaaacgccaccctcaaccccacccctgcaggagaggaacctgaaacgcaccgc
aaacccagcagtgacagtcagagcttcaacaaggtggcagagcgtgtgctgctgcggctg
caggagaaactcaaaggtgtggaggagggaacggtgctcagcgtcggcggccaagtcaac
ctcctcatccagcaggccatggatccgaaaaacctgagccgcctcttccctggctggcag
gcatgggtttga |
|---|
