Neoarius graeffei (lesser salmon catfish): 132871562
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Entry
132871562 CDS
T10798
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03015
mRNA surveillance pathway
ngra03022
Basal transcription factors
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132871562 (taf15)
03040 Spliceosome
132871562 (taf15)
09122 Translation
03015 mRNA surveillance pathway
132871562 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132871562 (taf15)
Spliceosome [BR:
ngra03041
]
Complex A
Other components
Complex A specific factors
132871562 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_7
Motif
Other DBs
NCBI-GeneID:
132871562
NCBI-ProteinID:
XP_060761801
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All DBs
Position
23:13974358..13985184
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AA seq
440 aa
AA seq
DB search
MASDSGYGQPGAPQSFGSYGGSQGYQHGGQGYGQGNGGSSYGGQGYEGYGQSESYSQSSQ
GYSGYGQQQQSYEGYGQQGSDSSSGYGDKSYGQQGFYGQQGSYGQQSEGGHGQSGASYGG
PSGGYARRNEGDGRRYGGDEGGDRSEGYRGRGRGGYDRGGFDRGGYDRGGFDRGGYDRGG
RGGGPPSGMGGGDRGGYKNYGGPRDYGQRDDSGEEQDNSDNNTIFVQGLGEDVTTQEVAE
FFKQIGIIKVNKKTGKPMINLYTDKATGRLKGEATVSFDDPPSAKAAIEWFDGKEFNGKP
IKVSFATRRAEFSQRGGGGGGRGRGGFRGRGSFGGGPNFDVKGGDWLCPNSSCGNMNFAR
RYECNKCGAPKPGDSFGDRGGRGGYGGDRGGDRGGGGFRGGRGGFRGGDRGGYGDRGGFG
GGYKMGGRGEHREERRDRPY
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgattcaggctacgggcagcctggagctccacaaagcttcggatcctatggt
ggatcccagggctatcaacatggtgggcagggttatggtcaaggtaatggaggcagctcg
tatggtggacagggttatgagggttatggacagtcagagagttatagtcagtcatcacaa
ggttactctggctatggacagcaacagcagagctatgaaggttatgggcagcaaggctct
gattcttcttcagggtatggtgataagtcttatgggcagcaaggcttttatgggcagcaa
ggttcatacgggcagcagtctgaaggaggacatggccagtctggggcgtcatatggaggt
ccatcaggaggttatgcaaggcgtaatgaaggtgatggcaggcggtatggtggtgatgaa
ggaggtgacaggtctgaggggtacaggggcagagggcgtggtggttatgaccgtggaggt
tttgatcgtggtggttatgaccgtggaggctttgatcgtggtggctatgacagaggtgga
agaggaggaggcccaccctctggtatgggtggtggtgaccgtggtggctacaaaaattac
ggtggacccagagactatggtcaaagggatgattcaggtgaagaacaggacaattctgac
aacaacacaatctttgtccaaggccttggagaggatgtcacaactcaggaagttgctgaa
ttcttcaaacagattggaattattaaggtgaataaaaagactggcaaacctatgattaac
ctgtacacggacaaagccaccggtagattgaagggtgaagccacagtctcatttgacgac
cctccttctgctaaagctgccattgaatggtttgatggcaaggagttcaatggaaagccc
attaaggtgtcctttgccacccggcgggcggagttttcccagagaggaggaggaggagga
gggagagggcgtggaggtttcagaggtcgaggaagctttggtggaggtcccaattttgat
gttaaaggaggcgactggctttgtcccaacagctcttgtggaaatatgaactttgcccgg
agatacgaatgcaacaaatgtggcgcaccaaaacctggagacagttttggagaccgtggt
ggtagaggaggctacggtggtgaccgtggtggtgaccgtggtggtggcggcttcagaggt
ggaagaggtggtttcagaggtggagaccgtggtggttatggtgatcgtggaggctttggt
ggtggatacaagatgggaggaagaggggagcaccgagaggaaagaagagaccggccctac
taa
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