Neoarius graeffei (lesser salmon catfish): 132871581
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Entry
132871581 CDS
T10798
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132871581 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132871581 (rabgef1l)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132871581 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
132871581 (rabgef1l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
132871581
NCBI-ProteinID:
XP_060761836
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Position
23:complement(16795508..16823700)
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AA seq
475 aa
AA seq
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MSSSTERRGIYVDQAALLCMKGCSFYGNSAWGGLCSKCWREENQKARAKQIEEDHALAER
LQKEEDAAYSDSNQGAHSGNSSTKLSKPEDKRNSQKSRTVPTGKKFFTTLAKTTLGRDVN
VPSQPAPTTSISQRPVAESDQATRQFIDFLKTIQKPGRDIFKQCHSFCYSVAYKKDLGAE
DLSESVQDFYQNLSDRLHNVYKGSPERVEVIMDEVEKYITLQLYEQAFCPESADDEVKDL
AIQKRIRDLHWVTVQMLCAPLKEEMPAVSDSLDKAITDIIEMDSKRVPRDKLGHITRCSK
HIFRAIKRSKKEAASADDFLPTLIYVVLRANPPRLQSNIQYITRFCNPRRLMSGEDGYYF
TNLCCAIAFIEKLDAQSLNLSPEEFELYMSDQASPDRPQAPGISFPSSSSSRSGPRADRP
ENDLIDWRDGAEASVQDVLQGLHLDSCAPSTSAIDSDNVDSEGLPPPLQPQVFAG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagcactgaacgtcgaggaatctatgtggatcaagcggccctgctctgcatg
aaaggctgcagtttttatggcaattcagcctggggaggtctctgttccaaatgttggcgc
gaggagaaccagaaggcacgagccaagcagattgaggaggaccacgcactagcagagaga
ctgcaaaaagaagaagatgcagcctattcagatagtaaccagggggcgcactcagggaac
tcgtctaccaagctgagcaaaccagaagacaaaaggaacagtcaaaagtcacgcaccgtc
cccacaggaaaaaaatttttcaccacgcttgcaaagacaaccctagggagagatgtcaat
gttcccagccagccagctcccaccacctccatcagccagcggcctgttgcagaatcagac
caagctacaagacaattcatcgatttcctgaagaccatacaaaagcctggacgggatatt
tttaaacagtgccattccttctgttatagtgtcgcttacaagaaggatcttggtgcagag
gatctctcggaatctgtgcaagacttttaccagaatttgtctgaccgcttacacaatgtc
tacaaagggagtccagagcgagtagaggtaataatggatgaagtggagaagtacataacg
ctgcagttgtatgaacaggccttctgtcctgaatctgcagatgatgaggtcaaagacttg
gccattcagaagagaatcagggatttgcactgggttacggttcagatgctgtgtgcccca
ctaaaagaggagatgcctgcagtatcggatagtctggacaaggctattactgatataatt
gagatggactccaagcgtgtgcccagggacaagctgggtcacatcaccaggtgcagcaag
cacatcttcagggcaattaagcgcagcaagaaagaggccgcgtcagctgacgacttcctc
ccaacactcatctacgtggtcctgagggctaatccgccccggctgcagtccaacatccag
tacatcacccgcttctgcaaccccagacgcctcatgagcggagaggacggatattacttc
accaatctgtgctgtgcaatagctttcatagagaagctggatgctcagtctctaaacctg
agtccagaggaatttgaactctatatgtctgaccaggcgtcccctgacaggccacaggcc
cctggaatctcctttccgtcatcctcttcatcacggagtggccccagggcggacaggccg
gagaatgacctcatcgattggagagatggagcggaggcctctgttcaggatgttctacaa
gggctccacctggactcttgcgctccgtccacctctgcgatcgactcggacaatgtagac
agtgaggggctaccgcctcctctacagccacaggtttttgctgggtag
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