Neoarius graeffei (lesser salmon catfish): 132871647
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Entry
132871647 CDS
T10798
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132871647 (zeb1a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
132871647 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
Motif
Other DBs
NCBI-GeneID:
132871647
NCBI-ProteinID:
XP_060761969
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All DBs
Position
23:complement(26374785..26560339)
Genome browser
AA seq
1294 aa
AA seq
DB search
MADGPRCQRRKQTKPRRNNVRSFSNVSEATSDSDDEDKLHIVEEDSIPDTSEEKPTIFQF
GAAQQGDILNDGNLGPDTLIQEIRVKEECVTDEDEAQMNETSWQGKKGVICPDVPEEEQS
TPERGVHDENGTPDEFSQLHSCPYCSRGYKRHTSLKEHIKLRHEKSKDDFSCTLCSYTFT
YRTQLDRHMNAHKNGREQRMVSHSGGNRKFKCTECSKAFKYKHHLKEHLRIHSGEKPYEC
SNCKKRFSHSGSYSSHISSKKCVAIPPGVNGLSHTPGVKTALTLTHPTRILLREKVDIDN
KPLEEQLPLKIKEEPDEHELKPVRTTAVATTTTITTTSTANNGSGISIQTTAPQGVVQTL
VLPTVGLVQPISINLRDLQNILKVAVDGNTIWQAVPNSNANGASSKVVNQGLPQAVLVQS
PHPHLQVISAISLPVLDQDGNSKIILNYSLDPQISTSDLNTAQSTLPHQTMAQAKAREPN
MAPPEVVKVNSTQCPKVAQTNITQPNVTPTPISPTTRPVPAQISILKSTQSTASNKAASI
IKFTKLVPGETKHTQPALLLVRTTNGSQGLVVRQLAAVNPQVTPTVGTTDLKSTPEYTVM
AAEHNSLIGLNQVAEETNTSQDNGQPEDLRSTLLQGTQFKTESDFEIKTDCEEALQIEKE
KERERKAGMMTPSDSTVAHRSVVCGDSFHNYATCLFCDNSPSSSDILNCLNSNEQGSDRS
FSSLLGEEDFESADQPPVKSLLPLLEAYNKDSHPSEEQLSQVAKSVSLPVDVVNRWFERM
RLKNILLHHPENSQNGQQTVANSLPEPSKDTQTQILDTPTEPHNEESVDQNSDPPPLNFS
INDHGIIKTEDQEEKGQAEPLDLSLPKSSCCNGNTSVTIALSATKQSVPTQEEPLNLTCF
KKDSMDGNTIYMTQSATSPINIIAAPLPTLVAIAEPGGIPCLRAAISTKQHTILIPQLSY
TYTSPSTNTKANTTTSCSTKASTITTPSSTDTQGTVLNGCQKEKTDAGDESLSGWEGLND
SNLSPNKKRRKMHGGQYACDLCDKIFQKSSSLLRHKYEHTVCFGSWSCCMMKFASLKYWP
NRMSCLICMMPPYQPHTRTLPPPCLTEGKRPHECGVCKKAFKHKHHLIEHSRLHSGEKPY
QCDKCGKRFSHSGSYSQHMNHRYSYCKKEVYDQPEPNNTSSTPPSQLDSDERESEAEEID
DEEPEGDDDGEEDFSGFDMSDIRVVRVGEEYDDEEEEVGRGEKKQMTGKDPVELDTVEKE
VLTLGMEGMMDSKTEKEIWKPVENGVLNDTVENK
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgtagaaagcagacgaagccgaggagaaataacgtg
agaagtttctcaaatgtgtcagaagcaacttcagattctgatgatgaagataaactccac
attgtggaggaagacagtattcctgacacttcagaggaaaagccgacaatattccagttt
ggtgcagcacagcagggggacatattgaatgatggcaacctggggccagacacactgata
caggaaataagggttaaagaggagtgtgtaactgatgaggatgaagctcagatgaatgaa
acctcatggcaggggaagaaaggggttatttgtccagacgttccagaggaggagcagagc
acaccagagagaggagtccatgatgaaaatggtacacctgacgagttctctcagctccac
tcatgtccatattgttcccgaggttacaagcgtcacacatcgctgaaggagcacatcaaa
ctgcgtcatgaaaaaagcaaggatgacttcagttgcaccctctgcagctacactttcacc
tatcgtacacagcttgaccgacacatgaacgctcacaaaaatggaagagaacagaggatg
gtttcacattcaggaggaaacagaaagtttaaatgtacagagtgttcgaaagcttttaag
tacaaacatcacctgaaggaacacctgcgcatccacagtggtgagaagccatatgagtgc
tctaactgtaagaagcgcttctcccactctggctcctacagttcccatatcagcagtaag
aagtgtgtagcaattccccctggtgttaatggcttatctcacactcctggagtcaaaaca
gctcttactctgactcaccctacacgtatcctcttgcgggagaaagttgatattgataac
aaacctttggaggaacagcttcctcttaagattaaagaagagcctgatgagcatgaactt
aaacctgtcagaactacagcggttgctacgacaaccactatcaccactaccagcactgct
aataatgggagtggaatttctattcagactactgctcctcagggtgtggtacagacatta
gttctacctactgtgggtctagttcagcctattagcatcaacctacgagacctccagaat
attctgaaagtggcagtggatgggaacacgatctggcaggctgtgcctaattcaaatgct
aatggagctagtagtaaggttgttaatcaagggctgccacaagcagtgcttgtgcagtct
ccccatccccatttgcaggtgatttctgcaatctctctccctgtgctggatcaggatgga
aattccaaaattatcctaaactatagtttagacccacaaattagcacttcagatttgaac
acagcacagtcgacattgccacatcaaactatggcccaagcaaaagcacgagagccaaat
atggcaccaccagaagtggtaaaggtgaattcaacacaatgtccaaaggtggcacaaact
aacataacgcagccaaatgtcactccaaccccaatatcacctactacaagaccagtacct
gcacaaataagtatacttaaatccacacagtcaactgcttcgaataaagcagcatccata
ataaagttcacaaagctggtcccaggagagacaaagcatacacagccagcattgttgctt
gtaagaacaaccaatgggtctcagggcctggtagtaagacagttagcagccgtgaaccca
caagtaactccaactgtaggaactacagatctgaaatcaaccccagaatatacagtcatg
gcagcagaacacaattcactcattgggctgaaccaggttgcagaagagaccaatacctct
caggacaacggtcaacctgaagacctgaggtctactttgctacagggaactcagttcaaa
actgaaagtgattttgaaattaagacagattgtgaagaagctttacagatagagaaagaa
aaggagagagaaaggaaagcaggaatgatgacaccaagtgattcaacagtggctcacaga
agtgttgtttgtggtgatagcttccataactacgctacatgtcttttttgtgacaacagc
cccagcagcagtgatatcttgaattgtctcaacagcaatgaacaaggatctgacaggtct
ttctcttctctcctgggggaggaagactttgagagtgcagatcagcccccagtgaagagt
ctcttgcccctccttgaggcatacaacaaagactcgcaccccagtgaagagcagctgtct
caagttgcaaaatctgtcagtttgcctgtggatgtggtcaataggtggtttgaaagaatg
cggttaaaaaacatactactccaccaccctgaaaattcccaaaatgggcaacagactgtt
gcaaattctctaccagagcccagtaaggacacgcagacccaaatcctggacactccaact
gaacctcacaatgaagaatccgtggaccagaatagtgaccctcctcctctaaacttctct
ataaatgatcatggcattataaagacagaggatcaggaagagaaagggcaagctgaacct
ttggatctctcactcccaaagtcctcttgttgtaatggtaacacttctgttactattgca
ttgtctgccacaaagcaatctgtccccacccaagaggaaccactcaatctcacatgtttc
aaaaaggattcgatggatggcaacaccatttatatgacacagtctgccacaagtccgata
aacataatagccgcacctttgccaactctggttgccatagcagagcctggtggaattccc
tgcctcagagctgccatctccaccaaacagcacaccatcctcatcccccagctgtcttac
acatacacctccccttctaccaacaccaaggctaacaccaccacttcctgcagtactaag
gctagcaccatcaccacaccctcatccacagacacacagggaacggtactcaatggctgt
cagaaggagaagactgatgctggagatgaatccttgtctgggtgggaggggctgaatgac
agcaacctctctcccaataagaaaaggaggaagatgcatggtggccagtatgcatgtgac
ctatgtgacaaaattttccagaagagcagctctttactacgccacaaatatgaacataca
gtgtgctttggatcttggtcctgctgcatgatgaaatttgcatcattgaagtactggcca
aacaggatgtcatgtctgatatgcatgatgccaccttaccagccccataccaggacactg
cctccaccatgcttgacagaaggtaaacgtcctcatgagtgtggagtctgtaaaaaggca
tttaaacacaagcatcacctaatagagcactcacgtcttcactccggagagaaaccatac
cagtgtgataaatgtggcaaacgcttctcacactccggctcttactcccaacacatgaac
catcgctactcctactgcaagaaggaggtttatgaccagccagagccaaataatacttcc
tctacgcctccctcacagcttgattcagatgagagggagagtgaagctgaggagatagat
gatgaagaaccagaaggagatgatgatggtgaggaagatttttctggctttgacatgagt
gacataagagtggtcagggttggtgaggaatatgatgacgaggaggaggaagtggggagg
ggagagaaaaaacagatgacaggaaaagacccagtggagttggatactgtggaaaaagaa
gtgttgacattgggcatggaaggtatgatggacagcaaaacagagaaggaaatatggaaa
ccagtggagaatggtgtgttgaatgacactgtagaaaacaagtaa
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