Neoarius graeffei (lesser salmon catfish): 132871738
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Entry
132871738 CDS
T10798
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132871738
04121 Ubiquitin system [BR:
ngra04121
]
132871738
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132871738
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132871738
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132871738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Zn_ribbon_19
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-Nse
zf-RING-like
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
132871738
NCBI-ProteinID:
XP_060762185
LinkDB
All DBs
Position
23:42247488..42292542
Genome browser
AA seq
311 aa
AA seq
DB search
MAKVSSQTCWYFCYVCLEEISPRLPDYTCPRCESGFIEELPEERRYFPQPRRENGSTSST
GDQNGHPFVNVDPRLFPFPHPYNHLALDIFRDFDCRMGRPSWERHDAENRCAREIPSRQR
NRARHPRWRRVNARRGLCPTSSLHTLDGRLIQQLVNGIIAPTAMPNMGTGPWGTLHSNPM
DYAWGANGLDAIITQLLNRLGNTGPPPADQEMIKNLPTVQITEEHVGAGLECPVCKEEYT
EGESVRELPCSHLFHNDCIVPWLEQHDTCPVCRKSLNGQNTATDPPDLSGANFSPSSSSS
SSSSSSSCDEN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtatcgtcgcagacctgctggtatttctgttatgtatgtttagaagagatt
agtcctcggcttccggattacacctgtccacggtgcgagtctggcttcattgaggaacta
ccagaggagagaaggtattttccccagcccagaagagagaatgggtccacatcgtccacc
ggcgatcagaacggtcatccatttgtgaatgtggacccgagactgtttcccttcccacat
ccgtacaaccacctggctctggatatcttcagagattttgactgccgaatgggcaggcca
tcttgggaaaggcacgatgctgagaaccggtgcgcgagggagattccatcacgccagcgc
aacagggccagacaccctcggtggcgccgtgttaacgcgagacgagggctttgtcccacg
tcctctctccacactctagacggcagactaattcagcagttagtaaacggaatcattgcg
ccaacagctatgccaaacatgggaacaggaccatggggaacgctacattcaaatccaatg
gactacgcctggggtgccaatggattagatgccattataacacagttattaaatcggttg
ggaaatacgggtccacctcctgcagaccaagaaatgatcaaaaacctcccgacagttcag
atcacagaggagcatgtgggagctggtttagaatgtcccgtgtgtaaagaagagtacacc
gagggggaaagcgttcgagaacttccatgcagtcacctctttcacaatgactgtatcgtg
ccctggctcgaacagcatgacacatgtccggtgtgcaggaagagcttgaacggccagaac
acagccacagatcctcccgacttatcaggagcaaacttctccccttcgtcgtcgtcgtcg
tcatcctcctcgagttcctcctgtgacgaaaattaa
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