Neoarius graeffei (lesser salmon catfish): 132871789
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Entry
132871789 CDS
T10798
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132871789 (sbno2a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132871789 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
UBact
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132871789
NCBI-ProteinID:
XP_060762281
LinkDB
All DBs
Position
23:47985846..48114826
Genome browser
AA seq
1648 aa
AA seq
DB search
MPILATSVVMDTEDFLHPEGPQSESPKYSVPSPPLPNALESQLFSPNPWTYSQQTQYNQY
SYPMQQSRQFQVNPSSVDEFGSFSEVDFSDLTSGRNGDFPADLSCMDELSNASLFSSTPD
SLSEYADPAGFNIDSLPHIPSEGSISTPAFWDTPGHSQRQLARLPVLPFLDEILNSQPLV
GYKLPEITQTPPEEEEEADEEETEELGHVDTYAEYKPSKSTIGISHPDIVVETSTLSSVP
PPDITYTLSIPDNTIRTGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRT
VAGIILENYLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIRVFALNKIKYGDTATSEGV
LFATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDL
QHKLPQARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEKRGVGAMEIVA
MDMKVSGMYIARQLSFSGVSFRIEEIALDEEFKVVYNKAAQLWAEAMEVFTKAADLLGLV
SRKSLWGQFWAAHQRFFKYLCIAAKVRRLVELAKDEMSQGKCVVIGLQSTGEARTREVLD
ENDGHLDRFVSAAEGVFQSMVQKHFPLEKPKREKTAGNKRKHLIGKPRGRPPKFPKHCVE
IGGVIKISDGSDTDSEDMDSDSNSSPESLQDNDDVIFVNHINGPTAKLEELKQGLLAKIA
ELGKELPLNTLDELIDQFGGPEKVSEMTGRKGRVVRNPDGSVEYESRAEQGFTIDHVNIK
EKERFMDGEKLVAIISEAASSGISLQADKRVQNKRRRVHMTLELPWSADRAIQQFGRTHR
SNQVNAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGT
KALDKITKSIMGYIENKVPPPKGYPGGEARFFTDMKKGMIDVGIFCKESRFGLSTEKDCT
TTKFLNRILGLEVHQQNFLFQYFIDNFEYLIDKDKKEGKYDMGILDLAPGNDEIHEEKEE
VFLTPGNPQEGQVILYKISVDRGMPWAEACSKAETLTGEYEGFYLSHKLRGSQPCVLLAE
QGRGHNLVVYKPNIGRQAHPENLDNLLQRYRKVTPDDAKDCWESQFVFSFQKCSHANWKG
KCKQVEQGHECWLGMRLRQYHMLCGALLRVWKRVADVVSDITNSSILQIVRLKTKQNSKQ
VGIKIPENCVERVRSELAQMDSEVKRLRQQKEQQAREQQAREQRAREQRVREQRAREQRA
QELLEQQKLLYSQKVFGHHPAMHLSNPSSYLGLHPGRAVLPKSQAVNEVLDLTLSPCPSP
ETKPTHLNGTLSLNGIAGMNGDFGMQRGAAEGGLKFPETYHLEELISQEQQRERRPPLQH
SMAHNSLDRLQTIHTQKQHTMLSVLQQNPASLGHLLTAQQNSSSSSSSSSSIQFKTQLLR
HNGSKPDISTLTNHGVRVQHFQQHVNSSMSRPPGLLQPSPIQQDGHQHSLMHTRTHSLHT
HVRENQMAGSDPAPLLLKLGPQGSLSSQPVTENSATPQDDFTFNLDLLSQPAFSLTPQAP
PSPSFSSSSPGTSSLFSTDPQSSSLSDSISPSSLFASSSERLPLPLPNGHCSTDTQDAHK
AVERMAHGGPADRRHSVIQFNPLDWNAT
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgcccattctcgcaacatctgtcgtcatggacacggaggacttcctgcacccggagggc
cctcaatcggagagccctaaatacagtgtgcccagtcctccactccccaatgcccttgag
agtcagctgttttcccctaacccatggacgtattcccagcagactcagtacaaccagtac
agctatcctatgcaacaatctaggcagttccaggtcaacccctcatccgtggacgagttc
ggctcattctctgaagtggatttctctgacctcacatcaggcaggaatggagactttcca
gcagacctgtcctgtatggatgaactgtccaacgcatctctgttctcctctacccctgac
tctctgtctgaatatgctgaccctgccggctttaacatcgatagcctgccccacataccc
agtgagggctccatctcaacaccagcattctgggacacacctggacacagccagagacag
ttggccaggcttccagttttgccctttctggatgaaatcttgaacagccaaccattagta
ggatataagctccctgaaatcactcagactccaccagaggaggaagaggaggcagatgag
gaagaaacagaagaactcggtcacgtggacacctacgctgaatacaagccatccaaatcg
actataggaatttctcatccggacattgtggtagagaccagcactctgtccagtgtccct
cccccagacatcacctacacactctccatcccagataacactatccggaccggcctgctg
tctgctctgcagctcgaagccatcatctatgcttgccagcaacacgaggttatcctgcag
aataaccagagggcaggttttctgattggggacggagccggtgtggggaagggtcgcact
gtagctggcattatactggagaactacttaaaaggaaggaagcgagccctgtggttcagt
gtgtctaatgatctgaagtatgatgcagaaagagacctcaaggacatagacgccccgaat
attcgtgtgtttgctttaaacaagattaagtatggagacacagctacctcagagggcgtc
ctgtttgccacgtactcagcgctgatcggggagagtcaggcaggaggacagcaccgcacc
cgactcaaacagatactggactggtgtaaacctggctttgacggagtcattgtgtttgat
gaatgccataaagccaaaaacgcgacatccacgaagatgggcaaagctgtcctggacctt
cagcacaagctgccccaagccagggtggtgtatgctagtgccacaggtgcctctgagcca
aagaacatgatctatatgagccggttagggatttggggagagggaacacccttcaggaca
ttcgaggacttcctacatgccattgagaagcggggtgtcggcgccatggagatagttgcc
atggatatgaaagtcagtggcatgtacatagcccggcagctcagcttttctggcgtgtcg
tttcggatcgaggaaatcgcactggacgaagagttcaaggtggtctacaacaaggcagcc
caactgtgggctgaagcgatggaagtgttcaccaaggcagcggatttgctgggactggtc
tctcggaagtccctctggggccagttttgggccgcccaccagcgcttctttaaatacctc
tgcatcgctgccaaagtgcgccgtctggtggagctcgctaaggatgagatgagtcagggc
aagtgcgttgtgattgggctgcagtcaactggcgaggcccgcactcgtgaggttctggac
gagaatgatggacacttggaccgattcgtctctgcagctgagggcgtgttccagtcgatg
gttcagaagcactttccgttagagaaaccgaagcgagaaaagaccgctggaaataaaaga
aaacatctcataggaaaaccaagaggtcggccacccaagtttccaaaacactgtgtagag
ataggcggcgttattaagatcagcgacggctcagatacggactctgaggacatggatagc
gactcaaactcttcccctgagtcactgcaagacaatgatgacgtcatctttgttaaccac
atcaatggacctactgcaaaactggaggagttgaagcagggattgctggctaagatagca
gagctgggaaaggagcttcctcttaatacactggatgagctgattgatcaatttggaggg
ccagagaaagtgtccgagatgacgggtcgtaagggccgagtggtgcggaatccggatggc
agcgtagagtatgaatcgcgtgctgaacaaggattcaccatcgaccatgtcaacatcaaa
gagaaggaacgcttcatggatggtgaaaaactggtggcgatcatctcagaggctgcaagt
tcagggatttctctccaggcggataaacgtgtgcagaataaaaggagaagggtgcatatg
acgctggagctgccgtggagcgctgaccgtgccatccagcaattcggtcgcactcatcgc
tctaaccaggtaaacgctccagagtacatcttcctgatctcggagttagcaggagagcgg
cgctttgcttccatcgtggccaagcgcctggagagtttgggggcactgacgcatggtgat
cgacgagccactgagtccagagatctgagcaaatacaactttgaaaacaaatatggcaca
aaagctttggataagatcacaaaatccatcatgggatacattgaaaacaaagttccacca
ccaaaaggctatccagggggtgaagcaagattcttcacagatatgaagaaagggatgatc
gacgtgggcattttctgtaaggagtcacgctttggcctcagcacagagaaagattgcacc
accactaaattcctgaatcggattctgggcctggaggtgcaccagcagaactttctcttc
cagtacttcatcgacaactttgaatacctgattgacaaggacaaaaaggaaggcaaatat
gacatgggtatactcgatcttgctccaggtaatgatgagatccatgaagaaaaagaggaa
gtattcctgactcctgggaacccccaagaaggccaggtcatcctctataagatcagcgtg
gatcgagggatgccatgggccgaggcctgcagcaaagcagagacactgactggggaatat
gagggcttctatctttcccacaagctgcgagggagccaaccgtgtgtgttgctggcagag
caaggccgaggtcataacctcgttgtctataagccgaacatcggcaggcaggcccaccct
gagaacctggacaatctgctgcagcggtaccgcaaggtgacaccagacgatgccaaagat
tgctgggagagtcagtttgtcttctctttccagaagtgcagccacgccaactggaaaggt
aagtgtaagcaagtggagcaaggtcacgagtgctggctggggatgcgtctgcgacagtac
cacatgctgtgtggagctttgctgagagtgtggaagcgagtcgcagatgtcgtctctgat
atcaccaactccagcatcctgcagatcgtgcgcctcaaaaccaaacagaacagcaagcaa
gtcggtataaagataccagagaactgtgtggagcgtgtgcgcagcgagctcgctcagatg
gactccgaggtgaagcgacttcggcagcagaaggagcagcaggcgcgggagcagcaggcg
cgggagcagcgtgcacgggaacagcgtgtacgggaacagcgtgcacgggaacagcgtgca
caggagcttctcgagcagcagaaactcctctacagccaaaaggtcttcggtcatcaccct
gctatgcatctctcaaacccctcatcgtacctgggcctgcatccgggccgggctgtcttg
cccaagagtcaggctgtgaacgaagtgctagacctcacactcagcccctgcccatcccct
gagaccaaaccgactcatctgaacggcacactgagtctaaacggaatagcagggatgaac
ggcgactttggcatgcagagaggagcggcggaaggagggctgaagttccccgagacgtat
cacctggaagaactgatctcgcaagagcagcagagggagagacgaccgcccttacagcac
agcatggctcataacagcttagacagactgcaaaccatccacacgcagaaacagcacaca
atgctgagcgtgctgcagcaaaacccagcaagcctgggacatttgctcacggcccagcag
aactcctcctcctcctcctcctcctcctcctccattcaattcaagacgcagctgctaaga
cacaacgggagcaaaccagacattagcacgctaaccaaccacggcgtacgcgtgcaacat
tttcagcagcatgtaaactcctccatgtcacggccacctggcttgcttcagccctctccg
atacagcaggacggtcatcaacactcactgatgcacacacgcacacacagtttgcataca
cacgtacgggaaaaccaaatggcaggcagcgatcctgcgccgcttttactaaaactgggc
ccgcaggggtcactcagcagtcagccggtcacagaaaactctgccacgccgcaggacgac
ttcactttcaacctcgacctgctcagtcagcctgctttctcgttaacccctcaagccccg
ccctcaccttcgttttctagctcctcccctgggacatcgtcgctcttctctacagatccg
cagtcgtcttcactctcggactccatctcgccttcttcgctgttcgcgtcttcgtccgag
cgactgcctcttccattacccaacggccactgcagcacggacacccaggacgcccataaa
gctgtcgagcgaatggctcacgggggtcccgccgaccgccgccactccgtcattcagttc
aatcctctagactggaacgccacctag
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