KEGG   Neoarius graeffei (lesser salmon catfish): 132871796
Entry
132871796         CDS       T10798                                 
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03010  Ribosome
ngra04120  Ubiquitin mediated proteolysis
ngra04137  Mitophagy - animal
ngra04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    132871796
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    132871796
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    132871796
   04137 Mitophagy - animal
    132871796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ngra03011]
    132871796
   04121 Ubiquitin system [BR:ngra04121]
    132871796
Ribosome [BR:ngra03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    132871796
  Archaea
    132871796
Ubiquitin system [BR:ngra04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   132871796
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 TBK1_ULD zf-C4pol OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 132871796
NCBI-ProteinID: XP_060762290
LinkDB
Position
23:48660419..48664181
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaacgttgaccggcaaaaccatcaccctcgaggtagagcccagt
gacaccattgagaatgtcaaagccaagattcaagacaaggaaggcatccctcctgaccag
cagcgtctgattttcgctggcaaacagttggaagatggacgcacgctgtcggattataac
attcagaaagagtccaccctgcacctggtgctgcgtttgagaggagggatcattgagcct
tccctcaggcagctggcacagaaatacaactgtgagaagatgatctgccgcaaatgttac
gcccgtcttcatcctcgtgccgttaactgccgcaagaagaagtgtggacacaccaacaac
ctgcgccccaagaagaagctgaagtaa

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