Neoarius graeffei (lesser salmon catfish): 132871910
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Entry
132871910 CDS
T10798
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngra03032
]
132871910 (pif1)
03029 Mitochondrial biogenesis [BR:
ngra03029
]
132871910 (pif1)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132871910 (pif1)
DNA replication proteins [BR:
ngra03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132871910 (pif1)
Mitochondrial biogenesis [BR:
ngra03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
132871910 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
RsgA_GTPase
AAA_5
Mg_chelatase
AAA_7
ABC_tran
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
132871910
NCBI-ProteinID:
XP_060762504
LinkDB
All DBs
Position
23:complement(57488854..57507130)
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AA seq
642 aa
AA seq
DB search
MLHAEDGARLECSVAVERVSGASASHAVQRRVLRRATVTLGRNEFQELVLRVQDLRGGPH
ENFALRNDFRLFTRFVKDGKCTVSFPQNNMQLLISDCPPDRLKTFLKILSIKHEALRGSN
PVSERARLRAGVPRSFEIISPVQQKDIQKANELRSKVNAPVQVKALMERAVNRTDGRQQV
KRPRTDGDTSLVKALHHQKKPLMLPVAQKLSKEQMAVLEAVLRGKNVFFTGSAGTGKSFL
LKRIVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLDQCLELAQRPGVLQHW
TSCKHLIIDEISMVEAEFFDKLESIARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKA
SFCFQARSWRKCIHVNMELTEVRRQTDRTFISLLQAIRLGRVTEEVTAQLLKSAMNPIER
DGIVATRLCTHKDDVELTNENKLKQLPGPLHVFEAVDSDPMLVKTIDAQSPVGHMLQLKV
GAQVMLTKNLDVQRGLVNGARGVVVDFLPGNQGLPRVRFLCGAVEVMKRERWTFKAVGGV
YLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFD
PRVVQANPDVLMFYKKLKRDRLLLQSSMNDFVGKHNQENEAW
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatgcggaggacggtgcaagactggagtgtagtgttgcagtagagcgtgtgagc
ggagcatcagcaagtcatgcggtacagcgccgagttcttcgccgtgctacggtcactctg
ggccgaaacgagttccaagagctggtgctgcgtgttcaggacctccgtgggggaccccat
gagaactttgctttacgtaatgacttccggctcttcacacggtttgttaaggacggcaag
tgcacggtgagcttcccacagaacaacatgcagctcttaatctctgactgtccacctgac
cgcctgaagaccttcctgaagatcctgagtataaagcatgaagccttacggggcagtaac
cctgtcagcgaaagggcccggttgcgggcgggtgtcccgagaagctttgagatcatcagc
cctgtgcagcagaaagacatccagaaagctaacgagttaaggagcaaagtgaacgccccg
gtgcaggtcaaggcactgatggagagggctgtgaacagaacagacggccgacagcaggtc
aaacgacctcggacagatggagacaccagcctggttaaagctctacatcatcaaaagaag
cccctcatgttgccagttgcacaaaaactcagcaaagaacagatggcggttctggaggca
gtactgcgcgggaagaatgtgtttttcacaggaagtgcaggtacggggaagtcgttcctg
ttgaaaaggattgtgggatcgctgcctcctaaaagcacgtacgccacagcaagcaccggt
gtagctgcctgtcatataggagggacgacattacacagttttgcaggtattggctcgggt
tcggctcctctggatcagtgtctggagctcgcacagcggcccggagtcctgcagcactgg
accagctgtaaacacctcatcatcgacgagatctccatggtggaggcagagttcttcgat
aagctcgagtccatcgccaggtccgttagaagatccactgaacctttcggaggaattcag
ctgattgtgtgcggagattttctgcagcttcctcccgtcagtaaaggaaaagagaaggcc
agcttctgcttccaggcgaggagctggaggaagtgcatccacgtgaacatggagctgacg
gaggtgcgcaggcagacggatcgcaccttcatctcgctgctgcaggccatcagactgggc
agagtcactgaggaagtgacggcccagctcctgaagagcgccatgaaccccatcgagcgg
gacggtatcgtagcgaccaggctgtgcacacacaaggacgacgtggagctcactaacgag
aacaaactcaagcagctgccagggcccttgcatgtgttcgaggctgtggatagcgacccg
atgttggttaaaaccatcgacgcacaaagtccagtgggtcacatgttacagctcaaagtg
ggagctcaggttatgctgaccaagaacctggatgtccagagagggctggtgaacggtgcg
agaggagttgtggttgacttcctaccaggaaatcaaggcctcccgagagtgcgcttcctg
tgtggtgctgtggaagtgatgaagcgtgagcgctggacgtttaaggcggtgggaggcgtg
tacctgagccgacagcagctcccgttaaagctagcctgggccatctccatccacaagagt
caaggcatgactctggactgtgtggagatctctctggcccgtgtgtttgagagcggacag
gcttacgtagccctgtctcgagcccgcagtctggaggggcttcgtgtcatggacttcgac
ccacgagttgtccaggcgaacccggatgttctgatgttctacaagaagctgaaaagggac
agactcctcctgcagtcctccatgaatgactttgttgggaaacacaaccaggagaatgaa
gcttggtga
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integrated database retrieval system
