Neoarius graeffei (lesser salmon catfish): 132872113
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Entry
132872113 CDS
T10798
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132872113
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132872113
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132872113
04121 Ubiquitin system [BR:
ngra04121
]
132872113
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132872113
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132872113
Membrane trafficking [BR:
ngra04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
132872113
Ubiquitin system [BR:
ngra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132872113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
132872113
NCBI-ProteinID:
XP_060762696
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All DBs
Position
24:12514843..12564693
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AA seq
487 aa
AA seq
DB search
MSWHGPEATDELLREFFRTRPPARNRMMKNWGVIGGIAAAMAVGVYVLWGPSTDRKKRRR
GMVPGLLNLGNTCFLNALLQGLATCPSLISWLQDFATLCSSHPSDTDTGTQIDTRISKTL
LELLTTLSSPDPGEDDVLDAGCLLEALRLYRWHISSFEEQDAHELFHVLTSSLEEERQPR
VTHLFDVETLEKSAETSENSISCLSRGPLQPIPNLWRTQHPFHGRLTSYMACKHCERQSP
VRYDSFDSLSLSIPVVQWGRLVTLDQCLQHFISSETIKEVECENCTKKQAETEDGQVLES
QRTTFVKQLKLGKLPQCLCIHLQRLTWSPEGAPIKRHEHVQFSEYLSMDQYKHSSTTQRL
QKPSRAKKATSEEPHDQNVANGVEHHNNNKKPLSNGSISSVLLHPAAFSPQLDLAHDFSS
SEYLFRLTAVLVHHGDTHSGHFVTYRRGPASFSPQWLWVSDESVRKASLQEVLSCSAYLL
FYERVHK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcacggaccggaggccacagacgagttgctccgagagtttttccgcacacgg
cctcctgccaggaataggatgatgaagaactggggtgtgattggaggcatcgctgctgct
atggcggtgggcgtgtacgtgctgtggggtcccagcacggacaggaagaagaggaggaga
ggcatggtcccggggttgttgaacctgggaaacacatgcttcctgaatgcactgttgcag
ggtctggccacatgtccttctctcatcagctggctccaggacttcgccacactctgcagc
tcccatccctccgacacggacacgggcacgcagatagacacacggatttccaaaacactg
ttggagctgcttacaactctgtccagtcctgatccaggagaggatgatgttttggacgca
ggatgtctgttagaagcccttcgtctctacagatggcacatcagctcgtttgaggaacag
gacgctcacgagcttttccacgtcctcacgtcgtctctggaggaagagcggcagcccaga
gtcactcacctgtttgacgtggagacgctggagaaatcagcagagacgagtgaaaactcc
attagctgtttgagtcgaggacccctgcagcccattcccaacctgtggagaacccagcac
ccgttccacggacgcctgaccagctacatggcctgcaaacactgcgagcgccagagtcca
gtgcgttacgattcgttcgacagcctctcgctgtccattcctgtcgttcagtggggtcgg
ctagttactctggatcagtgtcttcagcatttcatctcctccgaaacgattaaagaggtg
gagtgtgagaactgcaccaagaaacaagccgagactgaggacggtcaggtcctggagagc
cagaggacgacattcgtaaagcagcttaaactcggaaagctcccccagtgtttgtgtatt
cacctgcagagactcacctggtctcccgagggcgctcccattaagagacacgagcacgtt
cagttctccgagtacctcagcatggaccagtacaagcacagcagcactacacagagacta
cagaagcccagcagggccaaaaaagccacatcggaagaaccacacgatcaaaatgtcgcc
aacggagtcgagcaccataacaacaacaagaagccgctgtcaaacggcagcatctcatca
gtgcttctccatccggcagcgttcagccctcagctcgacctcgcacacgacttcagctca
tcggagtacctgttccggctgacggcggtgctcgtgcaccatggcgacacgcactccggt
cacttcgtcacgtaccggcgtggcccggcgtccttcagcccgcagtggctgtgggtttcg
gacgagtccgtgcgcaaggccagtctacaggaagtcctctcgtgcagcgcgtacctgctg
ttctacgagcgagtgcacaagtga
DBGET
integrated database retrieval system
