Neoarius graeffei (lesser salmon catfish): 132872125
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Entry
132872125 CDS
T10798
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngra01009
]
132872125 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngra03009
]
132872125 (ddx31)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132872125 (ddx31)
Protein phosphatases and associated proteins [BR:
ngra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132872125 (ddx31)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-60S particles
Helicases
132872125 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132872125
NCBI-ProteinID:
XP_060762713
LinkDB
All DBs
Position
24:48060068..48109231
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AA seq
716 aa
AA seq
DB search
MADDLLMINIFNQQPTDSHFSEKKHKSPSEHKWTAKNSADGKRKASFGEDYGSAKQRKLD
PTNEYQAVSKFPSKPKRPPKKGLEEHKGHDKPFIKTSSLFRNNPEIPDVLRPAVTQVKEK
IFTSNSFQELDLHPHLVATLNKVLNISSMTSVQKQTIPELISGKDAVVRSQTGSGKTLAY
GIPLVQSLQAVQPKIKRSDGPLAVVIVPTRELAQQSFQIFQKLLKPFTWIVPGVLMGGEK
RKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFSAVRWLVLDEADRTLDLGFEKDLTVI
LNTLNAAGSTRQTVLLSATLTEGLSRLTSISMNDPVYIHVSEVTDEKSVDTPKPSLSSQT
PPSQQTDSYAVPNRLQQYMVVVPSKLRLVCLAAFILARCKFERDQKLIIFVSSCEAVEFL
VTLLSTVLCGKSSTTNKHQLSINFLRLHGNMEQEERTEVFQEFSQSKTGVLLCTDVAARG
LDLPQVTWIVQFNPPTSAAEYVHRVGRTARIGAQGNGLLFLTPSETTYMDVLANHNISLS
EMKMEDILSTLMKDERFRGRGHWDKKKSAGAREQDMRERATVLQTEFENYVHGSVESVQA
AKKALQSFVRAYTAYPSALKHIFHIRHLHLGHAAKSFGLRDAPQGLSSAISDSTDNGKGK
KKVKGKDKKRPTVKLTARQRVASLIRSEYISGIDGESKSKKKRKKKANTEDELTEG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatctgctgatgatcaacatcttcaaccagcaacctactgactctcacttc
tctgagaagaagcacaagtctccatcagagcacaaatggacagcaaaaaattcagccgat
ggaaaaaggaaggcctcatttggagaagactatggctctgccaagcaaagaaagctcgac
ccaacaaatgagtaccaggcagtgtcgaagttcccatcaaaacccaaaaggcctccaaag
aaaggactggaggaacacaagggacatgacaaaccttttattaagacgtcgtctcttttc
cgaaacaaccccgagatcccagatgtgctcaggcctgctgtgactcaggtgaaggagaag
atctttacgagtaactcctttcaagaactagacctgcatcctcacttagtggcgacactg
aacaaagtgttaaacataagcagtatgaccagcgtacagaagcagaccattccggagctt
atatcaggaaaagatgctgttgttcgatctcagactggatccgggaaaacgctggcgtat
ggaatccctctggtccaatcactgcaggcggtgcagccaaaaatcaagagatcagatggc
ccactggcagttgtgattgtgcctacgagagagttggcacagcagagctttcaaatcttc
cagaagcttctaaagccgttcacctggatcgtacctggtgtcctgatgggaggagaaaag
aggaaagcagaaaaagccagactgaggaaaggcataaatgttttgatctccactccagga
cggctggtagaccacatcaagaacactctgagtattgcttttagtgctgtacgctggctt
gttctggatgaagcagacaggactctggatctgggctttgagaaggacctgactgtaatc
ctgaacactctgaatgctgccggctccactcgacagacggtgctgctctccgccacactc
actgaggggctctcccggttaaccagcattagcatgaacgaccccgtgtacatccatgtc
tcggaagtcactgatgaaaaaagcgtggacacacccaaaccctcgctctcatcccagact
ccgccttctcagcagactgacagctacgccgtgcccaacaggctgcagcagtatatggtc
gtggtgccgagcaaactgcgcctggtctgccttgcagcatttatcctggccaggtgtaag
tttgaacgggatcagaagctcatcatcttcgtatccagctgtgaggcagtggagttcctt
gtcacgctcctctccactgtcctgtgcggtaaatccagcactacaaacaagcaccagctg
tcgatcaacttcctccgactccatggcaacatggaacaagaggagcggaccgaggtgttt
caggagttctcccagagtaagactggtgtcctgctgtgtacggatgtggcagcacgtggg
ttggatcttcctcaagtcacatggatcgtacagtttaaccctcccacttctgcagcggag
tacgtgcatcgtgtcggccgtacggctcgcatcggggctcagggcaacggacttctcttt
ctcaccccctcagagaccacctacatggatgtcttggccaatcacaatatcagtctcagt
gagatgaaaatggaagacatcttgtcaactctgatgaaggacgagcgcttcagaggcagg
ggacattgggacaaaaagaaatcagccggtgcccgtgagcaagacatgcgcgagagagcg
acggttttacagacagagtttgagaattatgtccatggcagtgtggagtcggtgcaggca
gcgaagaaagccctgcagtcgttcgtgagggcgtatacggcgtacccctctgctctgaaa
cacatcttccacatccgtcacctccacctgggccacgctgccaagagcttcggcctgcga
gacgcaccacagggcctgtcgtccgccatcagcgactccacggataacgggaagggcaag
aaaaaagtgaaagggaaggataaaaagaggcccactgtgaagctcacagcgagacagcga
gtggccagcctgatccgctccgagtacatcagcgggatagacggagagtccaaatccaaa
aagaagaggaagaagaaagcaaacacagaagatgagctgacagaagggtga
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