Neoarius graeffei (lesser salmon catfish): 132872180
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Entry
132872180 CDS
T10798
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132872180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132872180
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
132872180
Protein recycling
Other Rab GTPase associated proteins
132872180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Motif
Other DBs
NCBI-GeneID:
132872180
NCBI-ProteinID:
XP_060762790
LinkDB
All DBs
Position
24:complement(16811204..16819158)
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AA seq
439 aa
AA seq
DB search
MWAEQTRGIHVTQAELLCKDGCGFYGNPAWQGYCSKCWRKRTRKTESSKEDHGLHDDGSS
QLNLSKTEEKKIVEKGRKSSSIMRLFWGSSSPPRQESLEGREAALKAFQSLDPGDFPGFL
KLLRKPSSQRLQSCCTAFLNTIDAYHDLPVQKQSDLVQDFYQNISAHFNGLPEQQVSQMM
EHVEKFIMTRLHKWVFCHDSCDDEQKDLTLQRRIKSLNWVTPEMLRVPFPQGSSDNSDPY
LSGITAIIEMDAKRAPQDKLTCLFKCSQHIFQALASENRQPANADDFLSALIYVVLRANP
PRLHSNINYVVRFGLPHSLMAGESGYYFTNLSCTVAFIEKLDGPALNLTPEEFNRYMQGR
RMPSEPAECTGQRRAQENREQLEKLKNRQEKVEQGVRAFQEQLDLWVRSVQDQIDEVRTQ
SMLVLKDDVAEAQPEKTVC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgagcagacacgagggatccacgttacacaggctgagctgctctgcaaagat
ggctgtgggttttatggcaacccggcctggcagggatattgttccaaatgctggagaaaa
aggacgcgcaagactgaaagcagcaaagaggatcatgggctccatgatgacggaagttcc
cagcttaacttgtctaaaaccgaagagaagaaaattgtggagaagggtagaaagtccagc
agtattatgcgactcttctgggggagttcttcaccaccacgacaagagtcacttgaaggc
cgtgaagcagccctgaaggccttccagagtttggatcctggcgatttccccggctttctc
aaactgctgcgcaagccatcctcccaacgtctgcagtcctgctgcacagccttcctcaac
accatcgatgcttaccatgacttgcctgtacagaagcagtctgacctggtgcaggatttc
taccagaatatttctgctcacttcaatggtctgcctgagcagcaggtttctcagatgatg
gaacatgtcgagaagttcatcatgactcgtctccacaagtgggtcttctgccatgacagc
tgcgatgatgaacagaaggatctaacactccagagaaggatcaagtcattgaactgggtt
actcctgagatgctgcgcgtgccttttccacagggtagctcagacaacagtgacccgtat
ttatcaggaattacagccatcatagagatggatgccaagcgtgcgcctcaggataaactg
acctgtttgttcaagtgcagtcagcatatttttcaggcgctcgcctccgagaacaggcag
ccagcgaatgcagatgacttcttgtccgctctgatttacgtcgtactgagggccaaccct
ccccgtctgcactccaacataaactacgttgtccgctttggtctgccacacagcctgatg
gcaggggagagcggctactactttacaaacctgtcatgcactgttgccttcattgagaag
ctggacggcccggctcttaacctcaccccagaggagtttaataggtatatgcaaggccga
agaatgccttctgagccagcagaatgcactggtcagaggagagcccaggaaaaccgagag
cagttggaaaaactaaagaaccgacaggagaaggtcgaacaaggtgtgcgtgcttttcag
gaacagctggatttgtgggtacgttctgtacaggaccagatagatgaagtcaggactcag
tcaatgttggtcctgaaagatgatgtagctgaagctcagcctgaaaagactgtgtgctga
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