Neoarius graeffei (lesser salmon catfish): 132872187
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Entry
132872187 CDS
T10798
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04140
Autophagy - animal
ngra04148
Efferocytosis
ngra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132872187 (vps33a)
04148 Efferocytosis
132872187 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132872187 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132872187 (vps33a)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132872187 (vps33a)
Hops complex
132872187 (vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
132872187
NCBI-ProteinID:
XP_060762800
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Position
24:complement(16901537..16941894)
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AA seq
600 aa
AA seq
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MASHLSYGRVNLNILREAARRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKAGRVPPADVKNVIFFVRPKLELMDVIAENVMSEDKLQPQREFHILFIPRRSLL
CEQRLKEQGVLNSFTNIDEYILDLIPYDGDLLSMESESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYSITNGYVKLPPEKFAQKKGGEGGKDLPTEPKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARTSLANHTSIAEL
IKDITTSEVFFDNLTVEQEFMTGVDTDKINIYIEDSIAQKDPLIKILRLVCMQSVCNNGL
KQKVLDFYKREILQTYGYEHILTLNNLEKIGLLKPQTTTRNNYPTIRKTLKLWMEDANEQ
NPNDISYVYSGYAPLSVRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPPGLHKKRQQG
ENRTTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAQIP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcacttgtcttatggccgagtcaatctaaatattttgagggaagctgcaaga
agggagcttcgcgaatttctggacaaatgcgcaggaagcaaggccattgtatgggatgaa
taccttacaggaccgtttggattaatagctcagtattcattgttgaaggaacatgaagtg
gaaaagatgtttacactcaaagcggggcgtgtgccaccagctgatgtcaaaaacgttatc
ttctttgtacgaccaaagctggagttgatggacgttattgcagagaatgtaatgagcgag
gacaagttacagccacagcgcgagttccacatcctgttcatacctcggcgcagtctgcta
tgtgagcagcggctaaaggagcaaggtgtcctcaactccttcaccaacatagatgagtac
attctggacctcattccctatgatggagacctgctctcaatggagtctgaaagtgcattc
agggaatgttatcttgagaatgaccagacaagcctgtatcacactgctaagggtttgatg
acactgcaggcactgtatggaacaatccctcagatctttggaaaaggagaatgtgcacgg
catgtagcaaacatgatgctgcggatgaagagggagtttgctggcagtcagaatcaaatc
ctgcctgtgtttgacacgctcttgttattggaccgaaatgtggacctgcttactccgcta
gccacacagctcacctatgaaggcctcatcgatgaaatctacagcatcactaatggttat
gtgaagcttccccctgagaagtttgcccagaagaagggaggtgaaggaggtaaagatctg
cccactgagcccaagaagttgcagctcaactcagccgaagagctatatgctgaaatccgt
gacaagaacttcaatgccgttggagcagcacttagcaagaaggccaagatcatttctgct
gcatttgaagagcgccacaatgcaaagacagttggagagattaaacagtttgtatcccag
ctgccccacatgcaggctgctcgcacctcacttgccaatcacacgtctattgctgagctc
atcaaggacatcaccacttcagaagttttttttgataacttgacagtggagcaagagttt
atgaccggagtggatacagacaagattaacatttacatagaagattccatcgcacagaag
gacccacttatcaagatcctccgactggtgtgcatgcagtctgtctgcaataatggcctg
aaacagaaagttcttgatttttacaagagagagatcctgcagacgtatggatacgagcac
attctgaccctcaacaacttggagaagattggtttactcaaaccacagacaaccacacga
aacaactatccgaccatcaggaaaacgctcaagctctggatggaggatgcaaatgaacag
aaccccaacgacatctcctacgtgtacagcggttatgctcctctcagcgtgaggctgact
caggttctggctcggccaggctggagaagtattgaggaggtgctgaaaatgctgcctggg
ccacactttgaggagagacagcaacttccacctggtctccataagaaacgtcagcaggga
gagaacaggacaacgctggtgttctttctcgggggtgtgacgtacgcagaaatcgccgca
ctccgctttctgtctcagatggaagatggtgggacagagtacatcattgccaccaccaaa
ctcatcaatggcaccagctggataaaatctctcatggaccgtcctgaagcacaaataccc
tga
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