Neoarius graeffei (lesser salmon catfish): 132872199
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Entry
132872199 CDS
T10798
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132872199 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132872199 (usp39)
Spliceosome [BR:
ngra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132872199 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132872199
NCBI-ProteinID:
XP_060762816
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All DBs
Position
24:17469426..17515111
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AA seq
497 aa
AA seq
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MASIKRERDIDNEEEEEVRVKVARSHDVEDKRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTKQHINNLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYTNVVLQALCNVPPL
RNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
TFQITKQGDAVDFLSWFLNALHGALGGTKKKPSILTKVFQGSMRIFSKKLPHPDLPAEEK
EALLQKEEYQEEMLESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEY
KTYKENFLKRFQLTRLPPYLIFYIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQA
TEKNTTYDLVANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQ
IWKRREMDDDGNSHTGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcataaaacgggagagggatattgataatgaagaagaagaagaggtgcgagtg
aaagtggcccgttctcatgatgttgaagacaaaagaagcagacactgtccctacctcgac
acaatcaacaggagtgttttagactttgactttgagaaactgtgttcaatttctctctcg
cacatcaatgtctatgcctgtctcatctgtgggaaatatttccaagggagaggtctgaag
tctcatgcctacacccacagtgttcagttcacacatcatgtcttcttaaatcttcacacg
ctcaaattctactgtctaccagataactacgagatcattgattcatctcttgaggacatc
acttatgtgctgaagccaacgttcaccaaacagcacattaataatttggataagcagggg
aagctgtacagggcctacgatggcacaacgtacctgcctggtattgtgggcctcaataat
atcaaggccaatgactacaccaatgtcgttctacaggctctgtgcaacgtacctcctctc
cgcaattactttttagaggaagagaactaccgtgggatccggcggcctcctggcgacatc
atgttcctgctggtgcagcgctttggtgagctcatgcgtaagctctggaacccacgcaac
tttaaggcccatgtctcgccacatgaaatgctgcaggctgtggtgctttgcagtaagaag
accttccagatcaccaagcaaggggatgctgtggactttctttcttggttcctaaatgca
ctgcatggcgctctgggtggaactaagaagaaaccatctattctcacaaaagtcttccag
gggtctatgcgtatcttctcaaagaaacttccccaccctgatttgcctgcagaggagaaa
gaggcgctgctgcagaaggaggagtatcaggaggagatgctggagtccacttttctgtac
ctcacccttgacctacctacagctccgctctacaaagatgagaaggagcagctgatcatc
cctcaggttcctctcttcaacattctggcaaagttcaatggcatcactgaaaaggagtac
aaaacatacaaagaaaacttcctcaaaaggttccagttaacccgacttcctccatacctc
atcttctacatcaagcgattcaccaagaataactttttcgttgaaaagaatcccaccatc
gtcaatttccccatcactaatgttgacctgcgtgagtatctaacagaagaggcccaggct
actgagaagaacacaacctatgacttggtagccaacattgtgcatgatggaaagccatca
gaggggtcatacagaattcatgtcctgcatcatggcacagggaagtggtatgagctccaa
gacctgcaagtaactgatattctgcctcagatgatcacactgtcggaagcatacatacag
atctggaagagacgagaaatggacgatgatggaaacagccatacaggagcgtga
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