Neoarius graeffei (lesser salmon catfish): 132872260
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Entry
132872260 CDS
T10798
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00514
Other types of O-glycan biosynthesis
ngra00515
Mannose type O-glycan biosynthesis
ngra01100
Metabolic pathways
Module
ngra_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
132872260 (pomt1)
00514 Other types of O-glycan biosynthesis
132872260 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ngra01003
]
132872260 (pomt1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
132872260 (pomt1)
Glycosyltransferases [BR:
ngra01003
]
O-Glycan biosynthesis
O-linked Man type
132872260 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
132872260
NCBI-ProteinID:
XP_060762953
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All DBs
Position
24:27949521..27993279
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AA seq
721 aa
AA seq
DB search
MQGVKIPLTVKVDINVLLVAVTVFGLLTRLYGIQFPKAVVFDEVYYGQFVSLYMKRVFFI
DESGPPFGHMILALGGYLGGFDGNFIWNRIGAEYSSNVPIWSLRVIPALAGSFSVPLAYL
LTVELGCSHFTALGASVLLILENSLIVQSRFMLLESVLIFFLLLAVVSYLRFHNSPNSSL
SRWLWLIVSGASCTFAVGVKYMGLFTYVLLLGLAAVHTWRVIGDKTLSNGKVLLQVVARF
LSLVVLPVFLYLGFFYIHLSLLHRSGPHDQLMSSAFQASLEGGLARITQGQPLEVAFGSQ
VTLRSVSSKPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPRKQSL
VVSSPPRPVRHGDIIQLLHGMTSRFLNTHDVAAPMSPHSQEVSGYIDFNVSMPAQNLWRV
DITNRESDRDVWKTILSEVRLIHVNTSAVLKLSGVSLPEWGFHQLEVVGDKIYKGYQQSG
VWNVEEHRYGRSQEQRERELELKSPTHVDFSRNLTFMAKFMELQWKMLTVRNEESEHKYS
SLPLEWITMDTNIAYWLHPSSNAQIHLIGNMVTWTLANLALLIYVVLFLIYLLRRRRKIE
DIPQASWEQLLQAGVVCSGGWAVNYLPFFLMEKTLFLYHYLPALTFQILQIPVVVEHLYT
HMLRFPTYQKAFGVVILAALCSVYICYRTFSPLTYGQPELTSEQLNTLRWRDSWDILFHK
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgttaaaataccactaacggtgaaagtggacattaatgtgctgctggttgca
gtcacagtctttgggctcctgaccagactgtacggcattcagtttcccaaagctgtcgtc
tttgacgaggtttactatggacagtttgtgtctttgtacatgaagagggtgtttttcatt
gatgagagtggaccaccttttgggcacatgatcctggcactaggaggctatctaggggga
tttgatggcaattttatctggaacagaatcggagcagaatactccagtaatgtccctatt
tggagcctccgagtgatacctgctttggccgggtcgttttctgtgcccctcgcctacctt
ctcacggtggagctgggatgttctcatttcactgcacttggtgcttccgtgctgctcatt
ctggagaattcgttgatcgtgcagtctcgcttcatgctcctggagtcagtgcttatcttt
ttcttgctgcttgctgttgtgtcttacctgcgcttccacaattcaccaaacagttcttta
agcaggtggctgtggctcattgtctctggagccagttgtacatttgcagtgggagtgaag
tacatgggtctcttcacctacgtgctgctcctcggtctggcagcagttcacacctggcgt
gtcattggagataaaacattaagcaacgggaaagtcttgcttcaggtggtagctcgcttc
ctgtcattagtggtgctcccagtttttctgtatttgggatttttctacatccatctctct
ctactgcaccgcagcgggccacatgaccagctgatgagcagcgcttttcaagccagtctg
gagggtggtctggccaggattactcagggtcagcctctggaagtggcgttcggctcccaa
gtgactcttcgtagtgtgtccagcaaacctgttccatgctggcttcattctcacaaggcc
aactatccaatcaggtatgaaaatgggcgtggcagctcgcaccagcagcaggtgacatgc
tatccttttaaagatgtcaacaactggtggattatcaaagatccaagaaagcagagtctt
gtggtgagcagtccacccagacctgtcagacatggcgacattatacagctgctgcacggc
atgacctcacgattcctcaacacgcatgatgttgcagctcccatgagccctcactctcag
gaagtgtctggctacattgacttcaatgtgtccatgccagcccagaatctctggagagtg
gacattacaaaccgtgagtctgaccgagatgtatggaagactattctgtcagaggtgcgg
ttgatccatgtcaacacttctgcagtgctaaagttgagtggagtgtctcttccagagtgg
ggatttcatcagctggaggtggtgggtgataagatctataaaggctaccagcagagcggt
gtgtggaatgttgaagaacatcgctatggtagaagtcaggagcagcgggagagggaactt
gaactcaagtcccctactcatgttgacttcagtagaaacctcacctttatggctaaattc
atggaactgcagtggaagatgctgactgtaagaaatgaagagtcagaacacaaatacagc
tccttacccctggaatggatcaccatggataccaatattgcatactggcttcatccatca
agtaatgcccaaattcacttgataggaaacatggtcacctggacacttgcaaatcttgca
cttcttatttatgtggttctgtttctgatctatctgctgagacgacggcggaaaatagag
gacatccctcaagcctcttgggagcagctgctgcaggcgggtgttgtgtgttctggagga
tgggctgttaattacctgcccttctttctgatggagaagacattgtttctgtaccactat
ctcccagcgctcaccttccaaattctgcagattcctgttgttgtggagcacctgtacact
cacatgctgagatttcccacgtatcagaaggcatttggtgtagtaatcctggcagccttg
tgctcggtgtatatttgttatcgcacattcagcccgctcacatatggccagcctgagctc
acatcagaacagctgaacacactgcgatggagagacagctgggatatactcttccataaa
cactga
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