Neoarius graeffei (lesser salmon catfish): 132872271
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Entry
132872271 CDS
T10798
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03022
Basal transcription factors
ngra03420
Nucleotide excision repair
ngra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132872271 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
132872271 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132872271 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ngra01001
]
132872271 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132872271 (cdk7)
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132872271 (cdk7)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132872271 (cdk7)
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
132872271 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
132872271 (cdk7)
Protein kinases [BR:
ngra01001
]
Serine/threonine kinases: CMGC group
CDK family
132872271 (cdk7)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132872271 (cdk7)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
132872271 (cdk7)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132872271 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
Kinase-like
ABC1
Haspin_kinase
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
132872271
NCBI-ProteinID:
XP_060762974
LinkDB
All DBs
Position
24:complement(29154426..29213048)
Genome browser
AA seq
374 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTKNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYLHHHWILHRDLKPNNLLLDESGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TSLPDYVSFKLFPGTPLEHIFSAASDDLLELLKGLFTFNPCTRLTASKALMTQYFSQRPA
PTPGPQLPRPNCSAEALKEKENLTIGIKRKRDGIEQGLLQVRLFDGNSAERAFSFPGSFP
PGSPQAPTHLLNTN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctttggatgtgaagtccagagctaagcgatatgaaaagctggactttctcggagag
ggtcagtttgccacggtctacaaagcaagagacaaaacgaagaataccattgttgcaatt
aaaaagattaaagttgggcacagaaccgaggcaaaagatggaatcaacagaacggccctc
agagaaatcaagctgctgcaggagttgagtcatccaaatataattggactccttgatgcc
ttcggacacaaatccaacattagtcttgtgtttgactacatggagactgacctagaggtt
atcataaaggacacgagtcttgtgctgacgccagccaacattaaagcctacatcctgatg
acactgcagggtctggagtacttgcaccatcactggatcctccacagggatttgaagcca
aacaatttactgctcgatgaatctggtgttctgaagcttgctgattttggattggcaaaa
gcctttggaagtcctaacagagtttatacacatcaagtagtgaccagatggtaccgggcc
ccagagctgctcttcggggccaggatgtatggagtgggtgtggacatgtgggcagtgggc
tgcatacttgcagagctcctactccggctcccctttctggctggagattctgacctggat
cagctgacaaagatatttgaagcgctggggactccaacagaagagacttggcctgggatg
accagtctcccagattacgtctcatttaaactgtttcctggcacacctttggagcacatt
ttcagtgcagcgagtgatgatcttctggagctcttgaagggcctgtttacctttaaccct
tgcacccgtctcacagcctcaaaggcactgatgacgcagtatttcagtcagagaccagcg
cctaccccaggccctcagcttccccggccaaactgttcagcagaagctctgaaagaaaaa
gaaaatctcaccatcggcattaaaagaaaacgtgatggtattgaacaaggtctgctacag
gttcgtctctttgatggtaacagtgcagaacgtgctttttcattcccaggctcctttcct
ccaggctctcctcaggccccgacacatcttttaaatactaactaa
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