| Entry |
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| Symbol |
cspg4ba
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| Name |
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
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| KO |
| K08115 | chondroitin sulfate proteoglycan 4 |
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| Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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| Brite |
KEGG Orthology (KO) [BR:ngra00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:ngra00535]
132872440 (cspg4ba)
04091 Lectins [BR:ngra04091]
132872440 (cspg4ba)
Proteoglycans [BR:ngra00535]
Cell surface proteoglycans
Others
132872440 (cspg4ba)
Lectins [BR:ngra04091]
C-Type lectins
Others
132872440 (cspg4ba)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
24:42459399..42512739
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| AA seq |
2400 aa
MRSFLSVWLLLVLAAVARGASFYGDGFVQLKVKDSTQLNTLHVRFRTSSQRGVLFLAAGQ
TDYLLLELSSGRLQAKLDLGSGEQILHSDKGNPLNDLAWHTVDLIHDRFNVNLTVDKHFQ
TSQRLPRSQHELDISDGVYIGGTGGLDKVYLPTDLTGFRGCLDEVLFNQHNLLSSLRPYS
GLKNVHEVSLGCSPQFFANEEEAISFFSSRAYVSLPPWTAQREWTLECSVHTSAQEGIIM
YSSAREGGFVAMEIHNGLLVAVLGRDGMRTELRSLTFINDEKWHHVKLYFTSKSLQLTID
EETVKSSVKSRSKTLHLKGFLFLGGVDDGTRFEVRKVGLSSVAGKRIKGGSFKGCFRDIK
VNGILTGLPNALVTKDVSVGCEPEKEPQISTTLSPKTPTKIFEFVTPLPSIDMSTLAIGL
VAGHGQNFLQLRNLVVSEGGRASLESKHIKVNLDFKKLGIRQSQITFRIEEQPVHGQLRF
DVDQEQEENTFSMLDLWHGRVMYIHGGSEEPHDYFMFSVFSSSRKVAPVYLKGEKLYRFN
VTVTPTNDAPELSLPEGNVFVLLENSRKKLTTDVLKATDVDSSSTDLVYSVLGNLNADAG
FLETEDNPGQAVTSFPHSALETGKINYAHTGVKNSRIVLRVSDGEKLSNTVVLRIMAVKL
EHSIANNTGVEVTQGETALIKTTQLAIQTNAVRLRQVVDIRYDVVEPPMFGELQKLHSNG
EWKFTDSFSQRVLEKDRLRYLSTFKDIQSANVTDRFKCKVTIAAKATEELVFNIKTKWID
YVVERNEVLEMDKIRRVAIDPEHLYATSQGVALTEEEIYFKLLSSTKKGLILLNNKKLGT
YSTFSQMNITNKEVEYQLIERPFENTSDSFEFHVFSKHAHSTSHLFRINIRADINSIYIK
NGGLAVLEGASKLITNTELFAETLSTKEIYYIVTEMPKHGKLARINLSNSTKDYDNLVSF
TNQDIIEERLMYVHDDSETIHDQFRFIASTSPRATSLISEDEVGSKDGVFNIAVQLVNDE
KPVRIVDKVFQVVKNGQRLLTLDDLRYHDADSDFSDGQLVYTRRGIPIGDLVLVNDTSHK
LYQFHQEDLEQKRVLFVHRGMNSGRFVLFVSDGKHYVSSLLDISAQEPYLKVANNTGLLV
QKGKVETFSNANFSVVTNMDIREDREITFKVNDAPKHGALFLKDKQIDTFTQYELKNALL
SYRHDGSKNLAEFFSVVVEAKGLHVEARINVKVYLESHQKPPVVLNNKILVVDEGKPVKI
ERSKLEVIHEANLPNEIVFAVQVAPTYGYLRSFINTKEQFQGIEQDPLMTFTQQDINTGN
IQYVQITPDQVNDSFVLEASNGVADLSGIVMSVDIIPRYIPIEVSNITLKEGASKALTEN
IIRVTSQHFSGLHFVYYVSEGPVHGHIENSRFPGTPTTYFTRKQPTTKERKYQAAQNFKV
EQEFIYYVHDNSETLQDYFTVLANATDLQKRSTPRTVHVHVTPVNDEPPVITANKVLRVW
VSSMTEITPEDLSAEDDDTAPQQLHYLTTQPSNGHLALKSAPTRPVMNFTQAHIDQGQLL
FVHSGATAGGFNFQVNDGVNFAPRQIFSVTARTLALHMEKSSPLKVFPGASSTISKEVLK
AATNDNEGSSNRTIVFTIVNPPKFGKLVTVEADKPTTEVYSFTQEMVDEGKVAYEQNVDS
VGWAALDKFTFTVSSPPASLEAQNFDIDISYENVGPERKTVLLKNTGAVVIEGDKVMIDK
TMLDASNLLTKQPDSRRNSYDVWYKVKSLPQHGVIVVGERNLTKEKPYFSQFIVNKYGIT
YQHDNSETMQDRFVFDAFLNLKSKPAQRPEDDRNVLEEAFNITVTPVNDQPPVLKTKAPS
LKVVQGNTMALGPSNLNVEDLDNSPDDIQYSVISRPNNGFLSLGGSLNVSVDTFSQAQIN
NGEVFFVQDGSPESGVFYFSVTDGHHRPVYKLFNLEVLKITISIVNQTDLLMEQGQMSVV
LNQSHLAAVTNGKNTTVQYKITDPPKYGQLILDNEEVTAFNQDDLQAQRLSYHMVNLASC
HDSFEFTAFTSEANLTDQALNVTVKPLIRYADDVKFSNEIRVKLKADFLDVSELALISGS
DPLFEILSSPMYGKILKTGKEKKAESTKMFFFSELQQGKLAIELKANLTEVQEVNDSLRF
VLKAGNLQPANGEFVFSIVPHNPALITPPPLDTSSTASPSQTTVKSPPFISKSSSIQPSP
PVTKAVPRFKSRNRWGNLNRSDSHATTMLKPTHGQEIVPVRNQPVRVESVSQISSSSNPM
LIILPLLALLLVVIMVILVLLLRRNQQKKKKSLNGASVPKASPDSWEFQGHSERTAMVPL
VTVTPLSPSNPGSPVLTRLQTGNPVYGQAMTLCSFEDMDLEASRFCRTTNPTLQHNQYWV |
|---|
| NT seq |
7203 nt +upstreamnt +downstreamnt
atgaggagtttcctttcagtgtggttgctgctggtgctggctgcagtggcccgaggagct
tccttttatggcgatggatttgtgcagttgaaggtgaaagattcgactcagctcaacaca
cttcacgtccgcttccgcacgtcgagccagagaggtgtgcttttcctggctgcagggcaa
accgattacctgctactggaactcagctctggcagacttcaggcaaagttggatcttggt
tctggtgagcaaattctacactcagacaaagggaacccattgaacgacttggcttggcac
acagtagatcttatccatgaccgatttaatgtaaatctaacagtggacaagcatttccag
accagccagagacttccacgctcacagcacgagctggatatcagtgatggtgtatatatt
ggtgggacaggaggcttggataaggtctatctccctactgacctcactggcttccgtggt
tgccttgatgaagtgctatttaatcaacacaacctcctttcgtcacttcgaccatactct
ggcttaaagaacgtccatgaggtttctcttggatgcagtccacagttctttgctaatgaa
gaggaggcaatcagctttttcagttccagggcatacgtctcccttcctccttggactgca
cagcgagagtggactctcgaatgctctgtacatacatcagctcaagagggaatcattatg
tacagttctgctcgagaagggggctttgttgccatggagattcacaacggcttacttgtc
gctgtgttaggtagagacgggatgaggacggagctccgctctcttactttcatcaatgac
gagaagtggcaccatgttaagctttacttcacctctaaaagcttgcagctaaccatcgat
gaagagacggtgaagtctagtgtcaaatccagatcaaaaaccttgcatttgaaaggtttt
cttttccttggtggtgtagatgatggcactcggtttgaagtcagaaaggtgggtctgtca
tcagtggcaggaaagcgcattaaaggtggctccttcaaaggatgctttagagatatcaag
gtcaatggtatcttaacaggtctcccaaatgctctggtaaccaaagacgtctcggttggc
tgtgaaccagaaaaggagcctcagattagcaccactttgagcccgaagaccccgactaag
atctttgaatttgtcactccgttaccatctatagacatgtccacccttgcaattggtctg
gttgctgggcatgggcaaaacttcttacaacttaggaaccttgttgtctctgagggcggt
cgtgcatcattggaatcaaaacatatcaaagtgaacctggattttaagaagctcggcatc
cgtcaatctcagatcacgtttagaatcgaagagcagccagtgcatggtcagttgaggttt
gatgtggaccaagagcaagaagagaataccttcagtatgctggatctgtggcatggcaga
gtgatgtacatccatggaggttctgaagagccacatgactacttcatgttctccgtgttc
tccagcagcagaaaagtggcaccagtctacctcaagggagagaagttatacagattcaat
gtgactgtaacaccaaccaacgatgcccctgaattgagccttcctgagggaaatgtcttt
gttctacttgagaactctaggaagaagttaaccaccgatgtgttaaaagccacagatgta
gacagcagctccacagacttggtctactctgtattgggaaatcttaatgctgatgctggg
tttctggaaactgaagataaccctggtcaggcagtcacttcattccctcattcagctctg
gaaacaggaaaaataaactatgcccacactggagtaaagaactccaggatagtgttgagg
gttagtgatggagagaagctcagcaacacggtggtgttaaggattatggcggttaaactg
gaacacagcatcgcaaacaacactggggtagaagtcactcaaggggaaacggctttaata
aaaactacacaattagcaattcagacaaacgcagtaagactaagacaagtagtagacatt
cgttatgatgtcgttgagccgccaatgtttggagaactacagaagcttcactcgaacgga
gaatggaagtttaccgattctttttctcaacgagttttggagaaagaccgtctgagatac
ctcagcacctttaaggatattcagtctgccaatgtaaccgatcgctttaagtgtaaagtc
acaatcgcagcaaaagcaacagaggaactggtgtttaatataaagactaaatggattgat
tacgttgtggagagaaacgaagttctcgaaatggacaagatcaggagagttgcgattgat
ccagagcatctatatgcaacgtcgcaaggtgtggctttaactgaggaggagatttatttc
aagcttctctcgtcaacgaagaaaggattgattttgctgaataataaaaagttaggtaca
tattctacatttagccaaatgaacatcactaacaaggaagtggagtatcagttaatagag
agaccatttgagaacacaagtgatagttttgaatttcacgtgttcagcaaacatgctcat
tcaacgagtcatttattcaggataaatatcagagcagatatcaacagcatttatattaaa
aacggcggacttgcggttttggaaggcgcgagcaaacttattacaaataccgaacttttt
gctgagactctgagtactaaagaaatctactacatagtcactgagatgccaaaacatggc
aagctagcacgaatcaacctgtccaactcgaccaaagattatgataatctggtgtctttt
accaatcaggatattatcgaggaacgcctcatgtacgtccatgacgacagtgaaacaatt
cacgatcagttcagatttatagcttcgacaagtccgcgggctacgagcctcatcagtgaa
gatgaggtcggctccaaagacggtgtcttcaacatcgctgtgcagttagtaaacgacgag
aagcctgttcgaattgtggataaggtgttccaagtggtcaaaaacggacagaggctgttg
acgttggatgacttacgctaccacgatgcagactctgacttcagcgatgggcagctcgtt
tacacccgccgcgggatcccgataggcgatctagtgcttgtaaatgacacttctcacaaa
ctttaccagtttcaccaagaggacctggaacagaagcgagtgttatttgttcatcgaggg
atgaactctggccgttttgttcttttcgtatccgatggcaagcactacgtctcctcgctg
ttggatatcagcgctcaggaaccgtacctaaaggttgccaacaatacaggcctattagtc
cagaaaggaaaggttgagacattcagcaatgctaattttagcgtggttacaaatatggac
atcagggaagaccgtgaaatcacttttaaggttaatgatgctccaaaacatggtgcatta
tttttaaaagacaagcaaattgacacttttactcaatatgaactgaagaatgctttgttg
tcgtatcgccatgacggcagcaagaatttggctgaatttttcagtgttgtcgtggaagcg
aaagggttacatgtggaagcaaggatcaatgtgaaggtgtacttggaaagccaccaaaag
ccacctgtcgtactcaacaacaaaatcttagtggtagacgagggaaagccggtgaagatt
gaacgcagtaaacttgaggtcattcatgaagcaaatttgcccaatgaaatcgtcttcgct
gtccaagttgctccaacttatggatatctgcgaagttttattaacactaaagaacaattc
cagggaattgagcaggaccctttaatgaccttcacacaacaagacatcaacaccggtaat
atccagtatgtacagataacgcccgaccaggtcaacgattccttcgttttggaagccagc
aacggcgttgcagacctgagtggcatcgttatgtctgtggatatcattcctcgctatata
cctatcgaggtgtccaatattacgctaaaagaaggagcatccaaggcgctgacagaaaac
atcatacgagttaccagtcaacatttctctgggctccacttcgtgtactacgtgtcagag
ggaccagtgcatggacacattgagaactctcgtttcccggggacacccacaacatatttt
accagaaaacagccgaccacaaaggaaagaaaatatcaggctgctcagaacttcaaggtg
gagcaggagtttatctactatgtccatgacaactccgagaccttacaggactacttcact
gttctagccaatgccacggatctacaaaaacgcagcacacccagaacggtgcatgtccac
gtcacaccagtaaatgacgaacctccggttatcacggccaacaaagtcctcagggtctgg
gtcagctctatgaccgaaatcactcctgaagatctgagtgcagaggatgacgatacggct
ccacagcagctccattacctcaccactcagcccagtaatggtcacctggctctgaagagc
gctcccactagaccagtcatgaacttcactcaggctcacattgaccagggacaacttctg
ttcgtgcacagtggagccacagctggaggttttaacttccaggtgaacgatggcgtgaac
tttgctccaaggcagatattcagtgtaacggctcgtacgcttgctctccatatggaaaag
agcagcccacttaaggtgtttccaggcgcttcatctacaatttcaaaagaagtcctgaaa
gcagcaaccaatgacaatgaaggcagttccaaccgcaccattgttttcaccattgttaat
cccccgaaatttggaaagctggtgactgtagaggcagacaagcccacaactgaggtctat
tccttcacacaagaaatggtcgatgagggtaaggtggcatatgaacagaatgtggactct
gttggatgggcagcattagacaagttcacattcaccgtgtcgtcacctcctgcaagcctc
gaggctcagaactttgatatcgacatctcttatgaaaatgtggggcctgaacgaaaaact
gtcctccttaaaaacacaggtgctgtggtaatagaaggagacaaagtcatgattgacaaa
acaatgctagatgcatcgaatctcctcaccaagcagcctgattctcgtcgcaactcctat
gacgtttggtacaaggtcaagtccctacctcaacacggtgtcatcgttgtgggtgaacgg
aatcttacaaaggaaaagccctacttctctcagttcattgtgaacaaatatggaatcacc
taccagcatgacaactccgagaccatgcaagaccgctttgtctttgatgcgttccttaac
ctgaagagcaaacctgcacagcgccctgaggatgaccgcaatgtgttagaggaagcgttc
aacattacggtcactccagtgaatgatcagccacctgtcctgaaaaccaaagcaccaagt
ctcaaagtggttcaaggaaacaccatggctcttggacccagcaacctgaatgtggaagat
cttgacaactcgccagatgatatccagtactctgtgatcagcagacctaacaacggcttc
ctttctcttggaggaagtctaaatgtatctgtggatacgttttctcaagcccagatcaac
aatggtgaagtattctttgtccaagatggcagccctgaatctggggtgttttatttcagt
gtcactgatggtcatcaccggccagtctacaaacttttcaacctagaggtgctgaagatc
accatttcaattgtcaatcaaacagatctgttaatggaacaaggccaaatgtcagtggtg
ctcaaccagtcacatctggctgcagtgactaatggaaaaaacactactgtccagtataaa
ataactgatcccccaaagtatggccaacttatcctggacaatgaagaagttactgctttt
aatcaggatgacttgcaagcacagagattaagttaccatatggtcaatcttgcatcttgt
catgacagctttgagttcactgccttcacgtcagaggcaaacctgactgaccaagcgctt
aacgtcacagttaagcctttaatcaggtatgcagacgatgtaaagttctcaaatgaaatt
cgtgttaagctcaaggcagactttctcgatgtctccgagcttgccctgataagtggtagc
gatccgttgtttgaaatcctgtcctcaccaatgtatggcaagattttaaagactggcaag
gagaaaaaagcagaatctacaaagatgtttttctttagtgaattacagcagggaaaactt
gctattgagctaaaggccaaccttaccgaagtgcaagaagtgaatgactcattaagattt
gtcttgaaagctggtaacctccaacctgctaatggggagtttgtctttagcattgtgcca
cataaccctgctctcataacaccaccaccactggacacaagtagtactgcttcacccagc
caaaccacagttaagagccctcctttcatttccaaatcctcatcaattcagccttcgccg
ccggtcaccaaggctgtgccaaggttcaagagccgcaatcgctggggtaacttgaatcgc
agtgattcacatgccactactatgcttaaaccaactcatggtcaagaaattgttccagtg
aggaaccaaccagtcagggttgagtcagtgtcccagatcagctcctcttctaaccctatg
ctcatcatccttccattgctcgctcttctacttgtggtcattatggtcatattggtgtta
ctgctgaggcgaaatcagcagaaaaagaaaaaatctttgaatggtgcctctgttcctaaa
gcctctcctgatagttgggaatttcaaggtcattcagagaggactgcaatggttccttta
gtgactgtaacccctctcagcccaagcaaccctggtagtcctgtcttgactagactccag
acaggcaaccctgtctatgggcaagccatgaccctgtgctcctttgaggacatggatctt
gaagccagtcggttctgcaggaccacaaaccccacgctgcagcacaatcagtactgggtg
tga |
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