Neoarius graeffei (lesser salmon catfish): 132872450
Help
Entry
132872450 CDS
T10798
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
132872450 (pdzd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132872450
NCBI-ProteinID:
XP_060763258
LinkDB
All DBs
Position
24:complement(43555828..43824317)
Genome browser
AA seq
2418 aa
AA seq
DB search
MPITQENALSHLSLLESWLKVNQGEQDREDEFGKKAGSTTPCQAAVRKLVEYIQLNFTDC
ESRPCNGSTLKDEADVEVRAVCLSKAEGDGPEFGLSFGNIPIFGDPEGKKKVRRRRRKSD
KGPVLDVGCIWVTEVKKKSPAQRCGDIKLRDELLSLNGQLMVGVDVTGASYLADQCWNGG
YIYLIMLRRIKRKAPLPPCNGSSGCAEIPIEHCGGMRSEPAVGSPTQNGKRTRKFGVISR
SSFTRDSKESSDNRDHKLENGYSSMETEATPREASTPTEKCPVTGQSVGITNNISTAALP
SRSNSRLSESFKSQTGRNEPSSQPKEGSRIWKMHMVKGQDGLGVQITGGRGSKRSPHGII
VAHVEKGGAIQRDGRLKAGDELLMINGQSLVGLSHQEAVAVLRSTAGLVQLVVASRDESE
VDFHKYPSSSLPDLVSTCSAQDAPPSPGDGKENMEPDVEDVRASSLSLPTQDSFTELDKL
EEHGRIDGPKGCRSPTPMKFRTRSQGGGSRLESVGEDDELIVENGEAGSDMVEKTAHGRR
KHSLPQQLDTAGVRQEYQIVKKSARSLSTVQVESPWRLAQPSIISNIVLMKGQGKGLGFS
IVGGQDSARGRMGIFVKTIFPNGAAAADGRLKEGDEILEVNGDSLQGLTHQQAIQTFKQL
KKGVVTLTVRTRLRSPSLTPCPTPTLLSRSSSPNSNTSSSTPIPTGFDEGEYRKGPGPKD
RIIMEVTLNKEAGVGLGIGACCLTLENSTPGIYIHSLAPGSVAKMDGRLSRGDQVLEVDS
VSLRHAALSEAYAILSECGPGPVSLIISRHPNPKMSEQEMDEVITRSTHRDSMGSHSSYS
LGQSSKSPSPMMKARQGDGSQALSWTMKRFLEPASRQASLSSEAELSQYFSHDIPSQSSL
SAMGSSDDGMLHNSRSCSTSLDESTAPHLHAYKEGSPCARSSGPVNRTTERQASVTSSPS
SVRSPLLRQRCVICYEDEASDEDEDAGPFHHLKRGNADAARHQEDDSGIVVATSSLEVDD
ESQDSSEGNRLEAATPFYSSSLESVEGGGNVTELPFMPIYCSEHSASLGTRKEAKRSPKL
EHKAVTRVKSMMSIECPNLAQKPKTEDITAASGATQTQATQRGRTQHHCRRGEPSELAGI
CTIETVVLKRSESESFGLDLEIKSSPLKVLITGLRPGGAAEREARGRMNVGDEIVAIGNT
PVCTSSYQEICDLMHNLPVTLTLEIQKPVSAVDRLSTLMMSSGTEQSTKMESPRAPVEEE
TRMDKTVVENEEISPTERNSTEMEAVHPEEVPLTYIDDVLHELNVFENNAKSGSKTVSDA
TDMPPCAEKSSINPENKESVTTLPVQPNQLDFSVLDSGNKGCLLPVGKTFLNSYSRNYNQ
LSDENTDLSVKGCEEKPSMYDMLDDSDSESDSATDGAVKNEKPQGDCKATQDTDSDEEVE
LCYSVVNQLQPNQEKDSSPTLKQDISGNQTDKELAADEVPQKASSHLQDSKTTDFSTSIT
APQSPFVPQSTSSESALSGASEHVSEKKETVSVTQGDLSNQEPSDCKADEKIEKALAPVI
TSMTLSSVSIHPGAQNNRHVTPQSQERTSKMHSDEPFTSDKPNTVQVPFMSTVTESKAKH
FPSGKTSSTQTTMDTEKEKAHDSKSLFSETQTKSSTLRPLDHKSLNNNPVSPSLNSRLKL
EEKSSCSTKLKGLSIKSKCKGLEQTGNRTARAEGPLLKKTHCSPTQSPKLPAKRITPTSS
PKMTRSLEKSSSALIKIADQSHERNPPDLSNTFKVNDPAKSEHRSETEHKGSHSKLSEAL
SKCENTATQRTFIEVRLSSSLSPSSSSASSPVLACKETVNTNSQVQGSHLIHKDNPLQAS
ASKPSLGTCTSFDSSKSRPEQNDSLKSSPKPDDKGCSNMSVSETTSLKPGKSKLYLKALD
RRSYSTDSEALKRHSFSVQQRIKSFENLASFDRPVVKGIDIQSYAVGSKAAVNKRLSGLA
LSNESRSLKRSLSSCVESINMDHSSLQPQNSSSNTVMNNSESSPSTGTIGTLAEERATPE
VTVPQSSAVPHTPPVLRSRNARSNSGISRSKLRELRALSMPELDKLCTQDFSQDPDNVMF
KTELEIQPTRPTKSPSENVQCTTVTRVSMVEPGSIDNEEHAQEQTVRQSGWSISLKDLSS
SPVEQKKVQNVLNSLPSVSDATTLMKEVKNVSEVNEDVYFVILTKDEGSGLGFSIAGGVD
LEQKYITVHRVFSQGAAGMEGTICRGDTVLSVNGSSLSGRTHGEALSCLHQTRLAKQALV
VIQKGEDSEPFTIRQELLLKPRTCSSSAFPEINRENGAAVEVGPDGALSVELMKTSAGLG
FSLEGGKSSAHGDRPLYIKRIFRGGAAELSQVIDVGDELLAINGRSLQGLMHYDAWNVIK
TVSEGPIQLVIRKPRTSV
NT seq
7257 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacccaggaaaacgcactgagtcacctgtctctgctggagagctggctgaag
gtaaaccagggcgagcaggaccgggaggatgagttcgggaagaaagcaggcagcactacg
ccatgtcaggctgcagtccgcaaacttgtagagtacatccagctgaactttacagattgc
gagagccgcccatgcaatggcagcacgcttaaggacgaagcagacgtggaagtgcgggcg
gtctgcttaagcaaagcggaaggagatgggcccgagtttgggctcagctttgggaacatc
cccatctttggggatcctgaagggaagaagaaggtgcggcgcagacgccgtaagagcgat
aaaggccctgtgttggacgtagggtgcatctgggtgacggaggtgaaaaagaagagcccc
gcacaacgatgtggtgacattaagttgcgggacgagctgctatccctcaatggccaactg
atggtcggagtggacgtcactggagccagctatctggcagaccagtgctggaatggaggc
tacatctacctgatcatgttgcggaggatcaagcgcaaggcccctctccctccatgtaat
ggcagcagcggctgcgcagaaattcccatcgagcactgcggtggcatgcgttcagagcct
gcagtcggcagtcccacacagaacggcaagcgaacccgcaagttcggcgtcatctctcgc
tcctcgtttacccgagacagcaaggaaagcagtgacaatcgagatcacaagcttgagaat
ggctactcttcgatggagacggaggccacgcccagagaggccagcacgccaaccgaaaag
tgtccagtcactggtcagtctgtggggataaccaataatatcagcactgccgctttgccc
agtcgctctaactcacgtctgtcagagagcttcaagtctcagacaggaaggaatgaacca
tccagccagcccaaggagggcagtcgtatctggaagatgcacatggtgaagggccaggat
ggtttgggcgtccagattacaggcggccgtggctccaaacgttcaccgcacggcatcatc
gtggctcatgtggagaaaggtggcgccatacagagggatggacgactgaaggcaggtgat
gagctgctgatgatcaacggtcagtccttggttggcctctcacatcaggaggccgtggct
gtccttcgttccactgcaggcctcgtgcagctggtggtggcttccagggatgagtctgaa
gtggactttcacaaatacccatcaagcagcctgcctgatcttgtgagcacatgctcagct
caggatgctccaccttcccctggggatgggaaagagaacatggagccggatgtggaggac
gtgagggccagcagcctctcactgcccacccaggactcattcacagagctggataagctg
gaggaacatggtcgaatcgacggacccaaggggtgtcgcagtccaacacctatgaaattc
cgcaccagatcccaaggtggtggcagccgtctcgagtctgtcggagaggacgacgagttg
atagttgaaaatggcgaagcaggaagtgacatggtggagaaaacagcacacggtaggcgg
aaacattccctcccacagcagctggacacagcgggagtccgacaggaatatcaaatcgtg
aagaaatcagcacggtctttaagtactgttcaagtggagtctccatggcgactggctcaa
ccatctattatctccaacattgtcctgatgaaaggacagggcaagggtttgggtttcagc
attgttggaggccaagattctgcacgaggtagaatggggatatttgtcaagaccattttc
cccaatggagcagcagcagcagatggtagactcaaggagggggacgagatcctagaagtg
aatggagactctcttcaaggcctcacgcatcagcaggccattcagaccttcaagcaacta
aagaaaggcgtcgttacactaactgtgcgaactcgtctgaggagtccaagcttgacccca
tgcccgacaccgaccctgctcagccgatccagctcgcccaattccaacaccagtagcagc
acccctataccaacaggcttcgatgaaggagagtaccgcaagggaccaggccctaaagac
cgcatcatcatggaggttacactaaataaagaggccggtgtgggattgggaatcggtgct
tgctgtttaacgctggagaacagcactcctgggatctacattcacagcctggctcccgga
tctgtggccaagatggatggcagactcagccgaggggaccaggtattggaggtagactct
gtcagcctacgtcatgctgcactaagtgaagcctatgctatcctgagcgagtgtggacct
ggcccagtaagcctcatcatcagccgacatccaaaccctaagatgtcggagcaggagatg
gacgaggtgatcactcgctctactcacagagacagcatgggaagccattcttcctacagt
ctgggacaatcatccaaaagcccttctcccatgatgaaggccaggcaaggtgatggcagc
caggccctcagctggaccatgaagaggtttttggagccggccagccgacaagcttctcta
agctctgaagctgagctctctcagtacttctcccatgacatccctagtcaatcttccctt
tcagcgatgggctccagtgatgatggtatgcttcacaacagcaggagctgcagtacctca
ctggatgagtcaacagcacctcatttacatgcttataaagaaggtagcccttgtgctaga
tcttctggccctgttaatcggaccacagagcggcaggctagcgtgaccagcagccccagc
tcagttcgtagccccctcttacgtcagcgctgtgttatttgctatgaagacgaagccagt
gatgaggatgaagatgctggacccttccatcacctaaaacgtgggaacgctgatgctgct
cgccaccaggaggatgactcgggaattgtcgtggcgacgtcatcattggaagtggacgac
gaaagccaagacagcagtgagggcaaccggctcgaagcggccactccattttacagcagc
tcgcttgagtcggtggaaggaggaggtaatgttactgaactgccttttatgcccatttac
tgttctgagcacagtgccagcctgggcacaaggaaagaggctaagcgctcacccaagctg
gagcacaaagctgtaacacgtgttaagagcatgatgagcatcgaatgccccaaccttgca
cagaaacctaagactgaggacatcactgcagcctctggtgctacccaaacccaagccacc
cagagagggagaacccagcaccactgccggagaggtgaacccagtgagctggcaggcatc
tgcactatcgagactgtggttctaaagcgcagtgagtctgagtcctttggacttgacctg
gagatcaagtcatctcctctgaaagtgctgattactggactgaggcctggaggtgctgct
gagagggaagccagggggagaatgaacgtgggagatgaaatagtggccattggtaacact
ccggtgtgcacctcgtcctatcaggaaatttgtgatctcatgcacaacctgccagtcaca
ctgaccttagagattcagaagccagtctcagctgtagatcgactctctactttgatgatg
tcttctggcaccgagcagtcgactaagatggagtcgccaagagctcccgtagaggaggaa
acacgcatggacaaaactgttgttgaaaatgaagaaatttctccaacagaacggaattct
acagagatggaagcagtccaccctgaagaggtgcctctcacttatattgacgacgtctta
cacgagttaaacgtatttgaaaacaatgcaaagtcaggatcaaaaactgtttctgatgcc
actgacatgcctccatgtgcagaaaagagcagcatcaatccagagaacaaggagagtgtg
actaccctcccagtacagccaaatcaattggatttttcagtcttggattcagggaacaaa
ggttgccttttgccggtaggaaagacatttctgaacagttactccaggaattataatcag
ctctcggatgaaaatacagacctttccgtgaaaggatgtgaagagaaaccaagtatgtac
gatatgttagatgatagcgattccgagagtgactctgcgacagatggtgctgtgaaaaat
gaaaagcctcaaggtgactgtaaagctactcaggacactgactctgatgaagaggttgaa
ctgtgttacagcgtagtcaatcagcttcagccaaatcaagagaaggacagttctcctact
cttaaacaagatatctcaggaaaccaaacagataaggagctggctgctgatgaagtacct
caaaaagcatcttcgcacttacaggactcaaagacaacagacttttctacttctatcaca
gcaccacagagtccattcgttccccagtctacaagttcagagtctgctttgagtggggcc
tctgagcatgtttctgaaaaaaaggagaccgtgagtgtgactcagggagatctgtcaaac
caagagccatcagactgcaaagctgatgagaaaattgaaaaggctttggcacctgtcata
accagcatgacactttcaagtgtcagtattcaccctggagctcagaataacagacatgtt
accccacagagtcaagaaaggacatctaaaatgcactcagatgaaccgtttacctcagat
aaacccaatactgtgcaagtgccattcatgtcaactgtgacagagtcaaaggctaaacat
tttcccagtgggaaaacatccagtacgcagactacaatggacacggagaaagaaaaagca
catgactctaaatcccttttttctgaaactcagaccaagtccagcactcttagacctttg
gatcataagtctctgaataataaccctgtctcgcccagcttaaatagcagactcaaactc
gaagagaagtcaagctgttctaccaagcttaaaggtttaagtattaagagtaaatgcaaa
ggactagagcaaacaggcaacagaactgccagagctgaaggtcctttgttaaaaaagacc
cattgctcccctactcagtcccctaaattaccagccaaaagaatcacccctacaagtagt
ccaaaaatgactagatcgctagagaagagtagttctgctcttattaaaatagctgaccaa
agccatgagaggaatcctccagatctgtccaacaccttcaaagtaaacgaccctgcgaag
tctgaacatagatctgaaacagaacacaaaggttctcattcaaagctaagtgaggcatta
tctaaatgtgagaacacggctacacaaagaacatttattgaagtgcgactctcatcttct
ttatccccatcttcttcatctgcttcatcgccagttctagcatgcaaggaaaccgtaaat
accaattcacaagttcaaggaagccatttaattcacaaagataacccattacaagcgtca
gcctccaaaccctctttgggaacttgtacatcatttgactcctccaagtctagaccagag
caaaatgattctcttaaaagctcacctaaacctgatgacaaaggatgcagcaacatgtcc
gtctcagagactactagtcttaaaccaggcaaatccaaactttatcttaaagcactggat
cgaaggagctactccacagacagtgaagctctcaaacgccactcattttctgttcagcag
agaatcaagtcctttgagaacttggccagttttgatcgtccagttgtaaaaggcattgac
atccagtcttatgctgttggctcaaaagctgctgtcaacaagaggttgtctggtctagcc
ctgtccaacgagagtcgctccttaaagaggagtcttagctcttgtgtagaaagtataaac
atggatcactcttcactgcagccacagaactcgtcttctaatacagttatgaacaattct
gaatcatcgccttcaactggaaccattgggacacttgctgaggaaagggcaacgcctgag
gttactgtaccacagtccagtgcagtaccgcatactcctccagtgctgcgctcccgtaac
gcccgttctaacagtgggatatcacggtcaaaactgagggaactaagagcacttagcatg
cctgagctcgacaagttatgcactcaggacttctcacaggatcctgacaatgtcatgttt
aagacagagctggaaattcaacctacaagacccacaaaatccccatcagaaaatgttcag
tgcaccacggtgaccagggtgagcatggtggagcctggctcaattgataatgaagagcat
gctcaagagcaaactgtgaggcaatcaggttggtctattagtctgaaagatttatcgtct
tcaccagtggagcagaagaaggtgcagaatgtcctaaattcccttccgtctgtgtcggat
gcgacgactctgatgaaggaggttaaaaatgtttcagaggttaatgaggatgtttacttt
gtgatcttgacaaaggacgagggctctggactgggtttcagcatcgctggaggggttgac
ctggagcagaaatatatcactgtccatcgggtattcagccaaggggctgctggcatggaa
ggtaccatttgtcggggggacactgtgttgtctgtaaatgggagcagtctgagtgggaga
acccatggcgaggctctttcctgtctccatcagaccaggctcgccaaacaggcacttgtg
gttatccagaaaggcgaagacagtgaacctttcacaattagacaggagcttcttttaaaa
cccagaacatgttcttcttctgcctttccagagatcaacagggaaaatggagcagctgtg
gaggtcgggccagatggagcattaagcgtggagcttatgaagacgtcagcaggtctgggt
ttcagcttggaggggggcaaatcttcagcccatggcgaccgtcccctctacatcaaacgc
attttcagaggaggtgctgctgaactctcccaggttatcgatgttggagatgagctcctg
gctatcaacggcaggtcgttgcagggcctgatgcactacgacgcctggaatgttataaag
actgtgtctgagggccccatccagttagtcattcgcaaaccgcgcacctctgtatga
DBGET
integrated database retrieval system
